CsaV3_1G042740 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G042740
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 27640383 .. 27640685 (-)
RNA-Seq ExpressionCsaV3_1G042740
SyntenyCsaV3_1G042740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGAGATCTTGACCCATTGGAACTGCCTTCTCCTGCCGCTGACGAACCCCATCATCTTCAATTTCTCAGGTGAACTTTTTTTTTTCTTTCATCTCTTTAGCTCTTTCTGTGACATGGGTTTTGATTCCATTTTGTTAAGCTCATCTTTAGGGCTTTTGTTTTCTTACCTTTATACTGCTTTCTTTGGATTTCTGTGTAATTGCTGTTGAGATTGCGATTCTCATATGCACCCACCCAGCAATGATTTGAATTCTCAACTACCTGCGCTAGCTGCCTGTGAAACTGGAAACTGGACCAGTTTT

mRNA sequence

GTTGAGATCTTGACCCATTGGAACTGCCTTCTCCTGCCGCTGACGAACCCCATCATCTTCAATTTCTCAGATTGCGATTCTCATATGCACCCACCCAGCAATGATTTGAATTCTCAACTACCTGCGCTAGCTGCCTGTGAAACTGGAAACTGGACCAGTTTT

Coding sequence (CDS)

GTTGAGATCTTGACCCATTGGAACTGCCTTCTCCTGCCGCTGACGAACCCCATCATCTTCAATTTCTCAGATTGCGATTCTCATATGCACCCACCCAGCAATGATTTGAATTCTCAACTACCTGCGCTAGCTGCCTGTGAAACTGGAAACTGGACCAGTTTT

Protein sequence

VEILTHWNCLLLPLTNPIIFNFSDCDSHMHPPSNDLNSQLPALAACETGNWTSF
Homology
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BLAST of CsaV3_1G042740 vs. NCBI nr
Match: KAE8653508.1 (hypothetical protein Csa_007520, partial [Cucumis sativus])

HSP 1 Score: 122.9 bits (307), Expect = 8.7e-25
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  VEILTHWNCLLLPLTNPIIFNFSDCDSHMHPPSNDLNSQLPALAACETGNWTSF 55
          VEILTHWNCLLLPLTNPIIFNFSDCDSHMHPPSNDLNSQLPALAACETGNWTSF
Sbjct: 1  VEILTHWNCLLLPLTNPIIFNFSDCDSHMHPPSNDLNSQLPALAACETGNWTSF 54

The following BLAST results are available for this feature:
BLAST of CsaV3_1G042740 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8653508.18.7e-25100.00hypothetical protein Csa_007520, partial [Cucumis sativus][more]
BLAST of CsaV3_1G042740 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G042740 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G042740 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G042740.1CsaV3_1G042740.1mRNA