CsaV3_1G042030 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G042030
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	non-specific lipid transfer protein GPI-anchored 2-like
Location	chr1: 26850471 .. 26853161 (-)
RNA-Seq Expression	CsaV3_1G042030
Synteny	CsaV3_1G042030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGGTAAATATTTGAGTCATTAATAATAATAATGGTTTGTATCATATTTTGGTGAAAGAAAAAAAAGAAGAAGAAGGGTTTGTTATTTAATTAATAGGAGGTGGATAAATAAATAAGAATAATAAATATAGAGAGAAAAAGGGTAATAAAAGAGTCCTTCAATGGCGGTAGCCGGTAGCTGCTCCCATTAATTTCCCTCACCTTCCCATCTCTATTTCATCACTTCAATTCCACCGCCCCTCCTTCAAAACCAACTAAAATTAAACCAAAACACCTTCACATCGCGAGCAATGGCGGCGGGAGGACCCTGGATCTTGGCTGTGGCAGTACTAGTGATTATGGCGATTGAGGGGATTTCAGGGCAGGCGCCGGCGCCGGGACCGGGGGCGGTGGGAGAAGTGGATTGCTTTACGACGCTGCTGGGCATGTCGGATTGTTTACCGTACGTGACGACGGGGAGTAATGATACGAAGCCGAATAAGCAATGTTGCTCGGAATTGGCAGGGCTGGTGGAGAATAGCCCTAAATGCCTTTGTGAGCTGCTTAGTGATCCAGATAAAGTTGGATTCACCATTGATGTTGATAGAGCTATGAAGCTTCCTACTCAATGCCATGTCTCCACTCCTTCCATTTCTCTATGCTCTCGTAAGCTTTCTTTCTTTTTTCATCTTTCCTCTTCAATTTCTTTCCTTTATGATATCAAATATACCAAACTCAGCTAATTAATTTATAAACATAGGGAAGGCTTCTTTAATGATAGATTATAAATATTAATACATACTCTCTCTATCAGATCTATTACAAAATCAAAATTGATACTAAAATTCTCCAATAAATCAATTGATTTTTTTTTTTTTTTGTTATTTTCAAATATAGTGGTTTATTTTGGTACACTATTATAATATTTTATTATATTCATAAATATTTTACCCTTAGAGTTTTTATTTTTAAAATAATTTATTTAAAAATTTTCACATTTATCATATACAAAATTAGGAGTTTGAATGATTAAATATTTTCGTCCTAATTTTGTTATTTGCAATCTCTAGAAAAGCAAAGCAAATTTTGAAATAAAAAAAGGTTTTCACACACTTTTATATCTTTTCTCTAAAATATTAAACTAAGAATTTAATATTTCTTGAAAAACGTGAAAATGTAGTATGAAATTGATAAGAAAACAAAGTATAAATTACAAAAAAATCTAATTTAAGAAAAGAAAATTTTGCTTAAACGAATCTTAGAAATCAAGGACTTGGTAAAGAATCCGAATTATGTGATAATCTCGATTTTGTTTCTTAAAACTGTTATCTGATTATGTGATCCGATCCAAATAGTATAATTCTGAAAATAATTTTTTATGTTTTTATTGTATCCAAAATTTGAATTTTACATTTTAAAGAGCATAATTACATACGTATAAAAAAATTCAATTCATATTTTTAAATATAATATAGATCCTATAATGTATTATAAATCCTATCATAGTGCAAAATAATAATCATTTTAGATTAAGTTATAAATTTGGTCGTGTGATTTTAAAATAGTAGAGTTTAGTCTATAGTTTATAACTAAAATTTAATCCTTTTGTTTAATAAAATCTTCTTATCAAACTATGAGATTTTTTAGTAGAATGTTTCAAACAAACATTATTACATAAACTAATATATTAACTTTGCTATCAAGATGCCCTTTTCCCCCCTAGAAAATTCAAATAGATATCACAAGCATCTTTAATAAATATCATCATAACAGGAGGCTACTTAGCACTAAGTTTGAACGTTAAATTGAAACCAAACCAATGACTTTATAACAAAATCTTGTAAATCAGAACTGGTATGATCAACTAATCTCAATGGTTTGGTTGTAGTCTCACTCCAACTTCAACTCCACCAACAACACCATTTGATATAAAGTTTAATTTAGTTTGTTCTTTGCCAAGTTCAAATTCAAACCGATAAGTGGTTTCAATTGGTTTGAGCGCCTTTCAAATTATCGGTTCTTCCTTGCACCCCTAACCAGCTCAAATCTGTGTTCTTCTAAATGCAGTTTTGGGATATCCAGTGGGATCATCGAATAGTCCAGCACCATCACCAGGTAATAAATCATACACTTTTTTTGTTTTGTGGAAATAATGAAACGCTATACTTTCACAATTTGAGACTATGCTAAACTAAAATTTCATTGTTAAATGTTAAAACATACCTAGGTGTTCAACCACCGGATGCAGGAGGCTCTAGCACCACCGACACCCCAGGAAACAGCGGGAATAGGGCTTCGAGCATCGACCACCTTCGTCTTGCATTTCCACTTGGCTTGGCCTTAGCATTCATTCCTGCACTTTTCTAACCTTTGATTATCTATAAAATTGTTTGCCTATTCTTCTGTCTTTCCTTTTCAGTTTAGAAGTCATTGTATTTGTATTTTATTGTATTGTACTGTACTGAGATATTTTCATGATTGTTAGGCCAATAAAATGTTAGCTTCTATTGAACTATTTTGTTGAAAGTGAAACCACCTGCCCTACAACTTCTAAGGGAAATGTTTGTTTCTGTTGTGGTAAAGATTTAAAGGTTTTCATGATGTGATGGCAAAAATCTGTAGATGTAACTTTGCAGCATTAAATGGTAACTAATCGAGATGGTAGCAAAGCAATTGACATTTTGTATGCATTATGTGTTGGCATAAGGATG

mRNA sequence

ATGGCGGCGGGAGGACCCTGGATCTTGGCTGTGGCAGTACTAGTGATTATGGCGATTGAGGGGATTTCAGGGCAGGCGCCGGCGCCGGGACCGGGGGCGGTGGGAGAAGTGGATTGCTTTACGACGCTGCTGGGCATGTCGGATTGTTTACCGTACGTGACGACGGGGAGTAATGATACGAAGCCGAATAAGCAATGTTGCTCGGAATTGGCAGGGCTGGTGGAGAATAGCCCTAAATGCCTTTGTGAGCTGCTTAGTGATCCAGATAAAGTTGGATTCACCATTGATGTTGATAGAGCTATGAAGCTTCCTACTCAATGCCATGTCTCCACTCCTTCCATTTCTCTATGCTCTCTTTTGGGATATCCAGTGGGATCATCGAATAGTCCAGCACCATCACCAGGTGTTCAACCACCGGATGCAGGAGGCTCTAGCACCACCGACACCCCAGGAAACAGCGGGAATAGGGCTTCGAGCATCGACCACCTTCGTCTTGCATTTCCACTTGGCTTGGCCTTAGCATTCATTCCTGCACTTTTCTAA

Coding sequence (CDS)

ATGGCGGCGGGAGGACCCTGGATCTTGGCTGTGGCAGTACTAGTGATTATGGCGATTGAGGGGATTTCAGGGCAGGCGCCGGCGCCGGGACCGGGGGCGGTGGGAGAAGTGGATTGCTTTACGACGCTGCTGGGCATGTCGGATTGTTTACCGTACGTGACGACGGGGAGTAATGATACGAAGCCGAATAAGCAATGTTGCTCGGAATTGGCAGGGCTGGTGGAGAATAGCCCTAAATGCCTTTGTGAGCTGCTTAGTGATCCAGATAAAGTTGGATTCACCATTGATGTTGATAGAGCTATGAAGCTTCCTACTCAATGCCATGTCTCCACTCCTTCCATTTCTCTATGCTCTCTTTTGGGATATCCAGTGGGATCATCGAATAGTCCAGCACCATCACCAGGTGTTCAACCACCGGATGCAGGAGGCTCTAGCACCACCGACACCCCAGGAAACAGCGGGAATAGGGCTTCGAGCATCGACCACCTTCGTCTTGCATTTCCACTTGGCTTGGCCTTAGCATTCATTCCTGCACTTTTCTAA

Protein sequence

MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF*

Homology

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BLAST of CsaV3_1G042030 vs. NCBI nr
Match: XP_004144106.1 (xylogen-like protein 11 [Cucumis sativus] >KGN66401.1 hypothetical protein Csa_007180 [Cucumis sativus])

HSP 1 Score: 361.3 bits (926), Expect = 4.9e-96
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60
           MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT
Sbjct: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60

Query: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120
           KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL
Sbjct: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120

Query: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180
           GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF
Sbjct: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180

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BLAST of CsaV3_1G042030 vs. NCBI nr
Match: XP_008451079.1 (PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X2 [Cucumis melo])

HSP 1 Score: 299.7 bits (766), Expect = 1.7e-77
Identity = 155/178 (87.08%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 3   AGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 62
           A G WILA+AV   MAIEGISGQAPAPGP   GEVDCFTTLL MSDCL YVT GSNDTKP
Sbjct: 2   AAGAWILALAV-ATMAIEGISGQAPAPGP--AGEVDCFTTLLNMSDCLSYVTAGSNDTKP 61

Query: 63  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 122
           NKQCCSELAGLVE+SPKCLCELLSDPDKVG TIDVDRAMKLP+QC +STP ISLCSLLG+
Sbjct: 62  NKQCCSELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGF 121

Query: 123 PVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
           PVGS  SPAPSPGVQPPDAGGSSTTDTPGN GNRASSI+HLRLAFPLGLALAFIPALF
Sbjct: 122 PVGS--SPAPSPGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPALF 174

[Close]

BLAST of CsaV3_1G042030 vs. NCBI nr
Match: XP_008451078.1 (PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X1 [Cucumis melo])

HSP 1 Score: 297.4 bits (760), Expect = 8.6e-77
Identity = 152/178 (85.39%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 3   AGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 62
           A G WILA+AV   MAIEGISGQAPAPGP   GEVDCFTTLL MSDCL YVT GSNDTKP
Sbjct: 2   AAGAWILALAV-ATMAIEGISGQAPAPGP--AGEVDCFTTLLNMSDCLSYVTAGSNDTKP 61

Query: 63  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 122
           NKQCCSELAGLVE+SPKCLCELLSDPDKVG TIDVDRAMKLP+QC +STP ISLCSLLG+
Sbjct: 62  NKQCCSELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGF 121

Query: 123 PVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
           PVGSS +P+P  GVQPPDAGGSSTTDTPGN GNRASSI+HLRLAFPLGLALAFIPALF
Sbjct: 122 PVGSSPAPSPDLGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPALF 176

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BLAST of CsaV3_1G042030 vs. NCBI nr
Match: XP_038879591.1 (non-specific lipid transfer protein GPI-anchored 2 [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 138/179 (77.09%), Postives = 151/179 (84.36%), Query Frame = 0


Query: 3   AGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 62
           A  P I A AV  +MAI GI+ QAPAPGP   GEVDCFTTLL MSDCL YVTTGSNDTKP
Sbjct: 5   AAVPSIFAFAV-AMMAIHGIAAQAPAPGP--AGEVDCFTTLLNMSDCLSYVTTGSNDTKP 64

Query: 63  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 122
           NKQCCSELAGLVE+SP CLC+LLSDPDKVG T+D+DRAMKLP+ C VSTP +SLCSLLG+
Sbjct: 65  NKQCCSELAGLVESSPSCLCQLLSDPDKVGLTVDIDRAMKLPSACSVSTPPVSLCSLLGF 124

Query: 123 PVGSSNS--PAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPAL 180
           PVGS+NS  PAP+PGVQPPDAG S    TPGNSGNRASSID L LAFPLGLALAF+P+L
Sbjct: 125 PVGSANSPAPAPAPGVQPPDAGDSGIAGTPGNSGNRASSIDRLHLAFPLGLALAFLPSL 180

[Close]

BLAST of CsaV3_1G042030 vs. NCBI nr
Match: XP_023516231.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-55
Identity = 121/182 (66.48%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 6   PWILAVAVLVIMAIEGISG---QAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 65
           P I A+A  VI+AI GI+G   QAPAPGP      DCFTTLL MSDCL YV+ GS D KP
Sbjct: 4   PSICALAA-VIIAIHGIAGAVAQAPAPGPAVA--TDCFTTLLNMSDCLSYVSAGSKDVKP 63

Query: 66  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 125
           +K CC ELAGLVE+SP CLC+LLSDP+KVG TIDVDRAMKLP+ C+VSTP ++LCSLLG+
Sbjct: 64  DKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLLGF 123

Query: 126 PVGSSN-----SPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIP 180
           PVGS++     +PAP PGVQP D GGS+T  TPG+SGNRASSI+ L LAFPLG+AL F+ 
Sbjct: 124 PVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFPLGIALGFLS 182

[Close]

BLAST of CsaV3_1G042030 vs. ExPASy Swiss-Prot
Match: Q9LZH5 (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=3702 GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.3e-21
Identity = 66/159 (41.51%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 11  VAVLVIMAIEGISGQAPA-----PGPGAVGEVDCFTTLLGMSDCLPYVTTGSND--TKPN 70
           V + V++ +  ++G   A     P  G  G  DC   L+ M+ CL YVT G      KP+
Sbjct: 5   VVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPD 64

Query: 71  KQCCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLG 130
           K CC  LAGLVE+SP+CLC LLS     ++G  ID  +A+KLP  C V TP  SLCSL G
Sbjct: 65  KTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLCSLFG 124

Query: 131 YPVGSSNSPAPSPGVQPPDAGGS-STTDTPGNSGNRASS 160
            PVG+  +     G  P  A GS S  ++PG  G+  S+
Sbjct: 125 IPVGAPVAMG-DEGASPAYAPGSMSGAESPGGFGSGPSA 162

[Close]

BLAST of CsaV3_1G042030 vs. ExPASy Swiss-Prot
Match: Q9ZVC7 (Non-specific lipid transfer protein GPI-anchored 12 OS=Arabidopsis thaliana OX=3702 GN=LTPG12 PE=2 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 7.0e-21
Identity = 61/148 (41.22%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 11  VAVLVIMAIEGISGQA-PAPGP----GAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQ 70
           +AVL+++ +   SGQ+ PAP P    G    V+C  ++L +SDC  YV  GSN+ KP   
Sbjct: 7   LAVLLLLFLSLCSGQSPPAPEPIAADGPSSPVNCLVSMLNVSDCFSYVQVGSNEIKPEAA 66

Query: 71  CCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY- 130
           CC ELAG+V++SP+C+C L       + G  +D  RA +L T C V  PS SLCS+LG+ 
Sbjct: 67  CCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFP 126

Query: 131 ---PVGSSNSPAPSPGVQPPDAGGSSTT 148
              P GS +S + S G       G+ TT
Sbjct: 127 TISPAGSEDSSSGSEGSDKDKKNGAMTT 154

[Close]

BLAST of CsaV3_1G042030 vs. ExPASy Swiss-Prot
Match: Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.6e-17
Identity = 52/156 (33.33%), Postives = 79/156 (50.64%), Query Frame = 0


Query: 30  GPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDPD 89
           G  A   VDC + +L M+DCL +VT+GS   KP   CCS L  +V   P+CLCE   +  
Sbjct: 18  GERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSG 77

Query: 90  KVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPSPGVQPPDAGGSSTTDT 149
            +G T+D+ +A  LP+ C V+ P  + C L      S + PA +PG+ P    G+    +
Sbjct: 78  SLGLTLDLSKAASLPSVCKVAAPPSARCGL----SVSGDPPATAPGLSPTAGAGAPALSS 137

Query: 150 PGN-----SGNRASSIDHLRLAFPLGLALAFIPALF 181
             N     S  R+S    L ++F   + +A I + +
Sbjct: 138 GANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

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BLAST of CsaV3_1G042030 vs. ExPASy Swiss-Prot
Match: Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.7e-15
Identity = 50/152 (32.89%), Postives = 78/152 (51.32%), Query Frame = 0


Query: 13  VLVIMAIEGIS------GQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQC 72
           ++V++++  +S        A AP P     VDC T +L M+DCL +V++G    KP   C
Sbjct: 15  LIVLLSLSSVSVLGASHHHATAPAP----SVDCSTLILNMADCLSFVSSGGTVAKPEGTC 74

Query: 73  CSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGS 132
           CS L  +++   +CLCE       +G T+++ +A  LP  C +  PSI+ C   G  V  
Sbjct: 75  CSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATC---GLSVAP 134

Query: 133 SNSPAPSPGVQ---PPDAGGSSTTDTPGNSGN 156
           S +P  +PGV    P  AG  +   + GN G+
Sbjct: 135 STAPGLAPGVAAAGPETAGFLAPNPSSGNDGS 159

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BLAST of CsaV3_1G042030 vs. ExPASy Swiss-Prot
Match: Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-14
Identity = 55/171 (32.16%), Postives = 82/171 (47.95%), Query Frame = 0


Query: 26  APAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELL 85
           APAPGP +    DC T +  M DCL Y+  GSN+TKP K CC+ +  +++ +P+C+C  L
Sbjct: 38  APAPGPSS---SDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGL 97

Query: 86  SDPDKVGFTIDVDRAMKLPTQCHVS--------------TPSISLCS-LLGYPVGS---S 145
               ++G  ++  RA+  P  C +S              TP  S  S   G P  S   +
Sbjct: 98  VSAGEMGIELNSTRALATPKACKLSIAPPHCGIITSGATTPGASPVSPSAGAPTTSPSAA 157

Query: 146 NSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPA 179
            SP  S      D   S T  +P +SG    S+  L + F +  ++A+I A
Sbjct: 158 KSPETSATSPSSDETPSMTAPSPSSSGTNILSVPALTIVFVIVSSVAYISA 205

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BLAST of CsaV3_1G042030 vs. ExPASy TrEMBL
Match: A0A0A0M2I0 (Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G600910 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.4e-96
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60
           MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT
Sbjct: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60

Query: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120
           KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL
Sbjct: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120

Query: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180
           GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF
Sbjct: 121 GYPVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 180

[Close]

BLAST of CsaV3_1G042030 vs. ExPASy TrEMBL
Match: A0A1S3BRS5 (non-specific lipid transfer protein GPI-anchored 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 8.4e-78
Identity = 155/178 (87.08%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 3   AGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 62
           A G WILA+AV   MAIEGISGQAPAPGP   GEVDCFTTLL MSDCL YVT GSNDTKP
Sbjct: 2   AAGAWILALAV-ATMAIEGISGQAPAPGP--AGEVDCFTTLLNMSDCLSYVTAGSNDTKP 61

Query: 63  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 122
           NKQCCSELAGLVE+SPKCLCELLSDPDKVG TIDVDRAMKLP+QC +STP ISLCSLLG+
Sbjct: 62  NKQCCSELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGF 121

Query: 123 PVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
           PVGS  SPAPSPGVQPPDAGGSSTTDTPGN GNRASSI+HLRLAFPLGLALAFIPALF
Sbjct: 122 PVGS--SPAPSPGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPALF 174

[Close]

BLAST of CsaV3_1G042030 vs. ExPASy TrEMBL
Match: A0A1S3BRF5 (non-specific lipid transfer protein GPI-anchored 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492460 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.2e-77
Identity = 152/178 (85.39%), Postives = 160/178 (89.89%), Query Frame = 0


Query: 3   AGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKP 62
           A G WILA+AV   MAIEGISGQAPAPGP   GEVDCFTTLL MSDCL YVT GSNDTKP
Sbjct: 2   AAGAWILALAV-ATMAIEGISGQAPAPGP--AGEVDCFTTLLNMSDCLSYVTAGSNDTKP 61

Query: 63  NKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY 122
           NKQCCSELAGLVE+SPKCLCELLSDPDKVG TIDVDRAMKLP+QC +STP ISLCSLLG+
Sbjct: 62  NKQCCSELAGLVESSPKCLCELLSDPDKVGLTIDVDRAMKLPSQCRISTPPISLCSLLGF 121

Query: 123 PVGSSNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAFIPALF 181
           PVGSS +P+P  GVQPPDAGGSSTTDTPGN GNRASSI+HLRLAFPLGLALAFIPALF
Sbjct: 122 PVGSSPAPSPDLGVQPPDAGGSSTTDTPGNGGNRASSINHLRLAFPLGLALAFIPALF 176

[Close]

BLAST of CsaV3_1G042030 vs. ExPASy TrEMBL
Match: A0A6J1JCG9 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485521 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.0e-55
Identity = 116/184 (63.04%), Postives = 137/184 (74.46%), Query Frame = 0


Query: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60
           MA    + LA  ++ I  I G   QAPAPGP      DCFTTLL MSDCL YV+ GS D 
Sbjct: 1   MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVA--TDCFTTLLNMSDCLSYVSAGSKDA 60

Query: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120
           KP+K CC ELAGLVE+SP CLC+LLSDP+KVG TIDVDRAMKLP+ C+VSTP ++LCSLL
Sbjct: 61  KPDKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLL 120

Query: 121 GYPVGSSN-----SPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAF 180
           G+PVGS++     +PAP PGVQP D GGS+   TPG+SGNRASSI+ L LAFPLG+AL F
Sbjct: 121 GFPVGSNSPASAPAPAPGPGVQPQDNGGSAIPGTPGSSGNRASSINRLHLAFPLGIALGF 180

[Close]

BLAST of CsaV3_1G042030 vs. ExPASy TrEMBL
Match: A0A6J1H7Z8 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita moschata OX=3662 GN=LOC111461313 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.0e-54
Identity = 116/184 (63.04%), Postives = 137/184 (74.46%), Query Frame = 0


Query: 1   MAAGGPWILAVAVLVIMAIEGISGQAPAPGPGAVGEVDCFTTLLGMSDCLPYVTTGSNDT 60
           MA    + LA  ++ I  I G   QAPAPGP      DCFTTLL MSDCL YV+ GS D 
Sbjct: 1   MATPSIFALAAVIIAIHGIAGAVAQAPAPGPAVA--TDCFTTLLNMSDCLSYVSAGSKDV 60

Query: 61  KPNKQCCSELAGLVENSPKCLCELLSDPDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLL 120
           KP+K CC ELAGLVE+SP CLC+LLSDP+KVG TIDVDRAMKLP+ C+VSTP ++LCSLL
Sbjct: 61  KPDKHCCPELAGLVESSPSCLCQLLSDPNKVGLTIDVDRAMKLPSACNVSTPPVNLCSLL 120

Query: 121 GYPVGSSN-----SPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHLRLAFPLGLALAF 180
           G+PVGS++     +PAP PGVQP D GGS+T  TPG+SGNRASSI+ L LAF LG+AL F
Sbjct: 121 GFPVGSNSPGSAPAPAPGPGVQPLDDGGSATPGTPGSSGNRASSINRLHLAFLLGIALGF 180

[Close]

BLAST of CsaV3_1G042030 vs. TAIR 10
Match: AT3G43720.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-22
Identity = 69/182 (37.91%), Postives = 91/182 (50.00%), Query Frame = 0


Query: 11  VAVLVIMAIEGISGQAPA-----PGPGAVGEVDCFTTLLGMSDCLPYVTTGSND--TKPN 70
           V + V++ +  ++G   A     P  G  G  DC   L+ M+ CL YVT G      KP+
Sbjct: 5   VVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPD 64

Query: 71  KQCCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLG 130
           K CC  LAGLVE+SP+CLC LLS     ++G  ID  +A+KLP  C V TP  SLCSL G
Sbjct: 65  KTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLCSLFG 124

Query: 131 YPVGS-------SNSPAPSPGVQPPDAGGSSTTDTPGNSGNRASSIDHL----RLAFPLG 173
            PVG+         SPA +PG      GG  +  +     +  SS  +      + FPL 
Sbjct: 125 IPVGAPVAMGDEGASPAYAPGSMSESPGGFGSGPSASRGSDAPSSAPYSLFLNLIIFPLA 184

[Close]

BLAST of CsaV3_1G042030 vs. TAIR 10
Match: AT3G43720.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.8e-22
Identity = 66/159 (41.51%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 11  VAVLVIMAIEGISGQAPA-----PGPGAVGEVDCFTTLLGMSDCLPYVTTGSND--TKPN 70
           V + V++ +  ++G   A     P  G  G  DC   L+ M+ CL YVT G      KP+
Sbjct: 5   VVIAVVLIVASLTGHVSAQMDMSPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPD 64

Query: 71  KQCCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLG 130
           K CC  LAGLVE+SP+CLC LLS     ++G  ID  +A+KLP  C V TP  SLCSL G
Sbjct: 65  KTCCPALAGLVESSPQCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGVITPDPSLCSLFG 124

Query: 131 YPVGSSNSPAPSPGVQPPDAGGS-STTDTPGNSGNRASS 160
            PVG+  +     G  P  A GS S  ++PG  G+  S+
Sbjct: 125 IPVGAPVAMG-DEGASPAYAPGSMSGAESPGGFGSGPSA 162

[Close]

BLAST of CsaV3_1G042030 vs. TAIR 10
Match: AT2G27130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.9e-22
Identity = 61/148 (41.22%), Postives = 85/148 (57.43%), Query Frame = 0


Query: 11  VAVLVIMAIEGISGQA-PAPGP----GAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQ 70
           +AVL+++ +   SGQ+ PAP P    G    V+C  ++L +SDC  YV  GSN+ KP   
Sbjct: 7   LAVLLLLFLSLCSGQSPPAPEPIAADGPSSPVNCLVSMLNVSDCFSYVQVGSNEIKPEAA 66

Query: 71  CCSELAGLVENSPKCLCELLSD--PDKVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGY- 130
           CC ELAG+V++SP+C+C L       + G  +D  RA +L T C V  PS SLCS+LG+ 
Sbjct: 67  CCPELAGMVQSSPECVCNLYGGGASPRFGVKLDKQRAEQLSTICGVKAPSPSLCSVLGFP 126

Query: 131 ---PVGSSNSPAPSPGVQPPDAGGSSTT 148
              P GS +S + S G       G+ TT
Sbjct: 127 TISPAGSEDSSSGSEGSDKDKKNGAMTT 154

[Close]

BLAST of CsaV3_1G042030 vs. TAIR 10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.5e-18
Identity = 52/156 (33.33%), Postives = 79/156 (50.64%), Query Frame = 0


Query: 30  GPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDPD 89
           G  A   VDC + +L M+DCL +VT+GS   KP   CCS L  +V   P+CLCE   +  
Sbjct: 18  GERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSG 77

Query: 90  KVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPSPGVQPPDAGGSSTTDT 149
            +G T+D+ +A  LP+ C V+ P  + C L      S + PA +PG+ P    G+    +
Sbjct: 78  SLGLTLDLSKAASLPSVCKVAAPPSARCGL----SVSGDPPATAPGLSPTAGAGAPALSS 137

Query: 150 PGN-----SGNRASSIDHLRLAFPLGLALAFIPALF 181
             N     S  R+S    L ++F   + +A I + +
Sbjct: 138 GANAATPVSSPRSSDASLLSVSFAFVIFMALISSFY 169

[Close]

BLAST of CsaV3_1G042030 vs. TAIR 10
Match: AT2G13820.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-16
Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 0


Query: 30  GPGAVGEVDCFTTLLGMSDCLPYVTTGSNDTKPNKQCCSELAGLVENSPKCLCELLSDPD 89
           G  A   VDC + +L M+DCL +VT+GS   KP   CCS L  +V   P+CLCE   +  
Sbjct: 18  GERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSG 77

Query: 90  KVGFTIDVDRAMKLPTQCHVSTPSISLCSLLGYPVGSSNSPAPSPGV 137
            +G T+D+ +A  LP+ C V+ P  + C L      S + PA +PG+
Sbjct: 78  SLGLTLDLSKAASLPSVCKVAAPPSARCGL----SVSGDPPATAPGM 120

The following BLAST results are available for this feature:

BLAST of CsaV3_1G042030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144106.1	4.9e-96	100.00	xylogen-like protein 11 [Cucumis sativus] >KGN66401.1 hypothetical protein Csa_0...	[more]
XP_008451079.1	1.7e-77	87.08	PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X2 [Cucumi...	[more]
XP_008451078.1	8.6e-77	85.39	PREDICTED: non-specific lipid transfer protein GPI-anchored 2 isoform X1 [Cucumi...	[more]
XP_038879591.1	1.2e-67	77.09	non-specific lipid transfer protein GPI-anchored 2 [Benincasa hispida]	[more]
XP_023516231.1	1.1e-55	66.48	non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita pepo subsp. p...	[more]

BLAST of CsaV3_1G042030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZH5	5.3e-21	41.51	Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=37...	[more]
Q9ZVC7	7.0e-21	41.22	Non-specific lipid transfer protein GPI-anchored 12 OS=Arabidopsis thaliana OX=3...	[more]
Q9ZQI8	3.6e-17	33.33	Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3...	[more]
Q8VYI9	5.7e-15	32.89	Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3...	[more]
Q2PE70	3.7e-14	32.16	Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of CsaV3_1G042030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M2I0	2.4e-96	100.00	Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_1G600910 PE=4 SV=1	[more]
A0A1S3BRS5	8.4e-78	87.08	non-specific lipid transfer protein GPI-anchored 2 isoform X2 OS=Cucumis melo OX...	[more]
A0A1S3BRF5	4.2e-77	85.39	non-specific lipid transfer protein GPI-anchored 2 isoform X1 OS=Cucumis melo OX...	[more]
A0A6J1JCG9	2.0e-55	63.04	non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1H7Z8	1.0e-54	63.04	non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita moschata OX...	[more]

BLAST of CsaV3_1G042030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G43720.2	1.7e-22	37.91	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G43720.1	3.8e-22	41.51	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G27130.1	4.9e-22	41.22	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	2.5e-18	33.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.2	1.1e-16	39.25	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 39..117 e-value: 4.6E-6 score: 36.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 16..117 e-value: 1.3E-15 score: 57.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 37..114 e-value: 5.5E-18 score: 66.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 37..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..156
None	No IPR available	PANTHER	PTHR33044:SF104	NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 2	coord: 15..180
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 46..109 e-value: 4.28764E-15 score: 64.3702
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 15..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G042030.1	CsaV3_1G042030.1	mRNA