CsaV3_1G038840 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G038840
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionT-box protein 41
Locationchr1: 24455018 .. 24458038 (-)
RNA-Seq ExpressionCsaV3_1G038840
SyntenyCsaV3_1G038840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAAACCTTCAATCTCTCTCAAACTCACCATTTTCCTCTCCCTCTCTCTTTCAGTCACCCCCTTTGCTCTTTTTCCCAATTACAACAAACCACCCCCAATTCCCAAAGCTACTCCCTCCGATTTGCTTAATCTTCTCGGTTCTAAATCTCAAGCTTCTTCTGTGAATCCTGGTGTAGCGAAGGAGCTGAAATCTTGTTTCAAATTCCTTGTTCCCTTCCATCCAACCCCATCCAACGCGAAATTATCCGGTAGACGGAGCTTGAGATCGACGGGATTTGATGATCGGAGTTGGAGAGAGGAGGATGAGCTCGTTTGGTGGCCACCTCAGTCGGTTCTTGAACTCGCTCGACTTGGTGTTGATTCTGGTGGAGACCCTGGGGCTATTCATCGCACCCTTGATCCTGCTATAATCCCTGTGAGTTTTGTGTGTCTACTTTAACTTGTTTTATGGGATTTGATTAGTTAAATTATAAATTTGGTTCCTATGTTTTGGGAAAAGTTAGAAGGTAGAACCAATTCTCATGAATAGTCCCAATAGTTTGATAAAATCCTTATAAACAGTAATCAACAGTTATCTACTGGAGGAACTATTTATAAAAATTGTGATAAATTTCACAAAATGGAGTATCTAAGATCTAAGATTGCCTTCCTTCTAACTAAAGCAATTGGTGCTAGGCACAAAATGTGGAGGTAGAAAGTCGAAAGCATACACAGTCTCGAATCCCAATTAGCTCATGGACGAGCATAGGGACTAAACTATAGTTATAAACTACAAGGACTAAATCCAAACTTTCCCCGAACTGTAAAGTGTTAAACTTTGTAGATAGGACTGGTTGGGTTTATGTGTTTAGGTAGGAATTTTTTACACCAAGAGTTCATGCATCTTTTATTTCTCGATTGGTGTATGCCATATGTCATCTGATTTATTTATTGAATGTCCAAAATGGATTGAGAGTTTAGTTTATTAACTCCTACTCGCTTTAGTAATGTAACAGATACCTGACATTCATGGATCACAAAGACACAAATGCGAACTCACAAGAACGCCATATGGGAGACGCTTTATAAGCGAGGTCTATCTTTACACTATGAAAAACTGTTGTTTATGATATTTGTGACATTTGATGTGGACTTATAAATGGTGTATGGTATTCAAATTGCAGGAACTAAATTCATACCTTCAGTTCCTGTTTGAGTTCATTGCTGCTCGATCTTCTGCTATGGGGTTTAACATTAAATTGAACCGTTTCGATTTATTCCATGGTCATCTTTTTCTTGCCTTTGACAACAACAGGCTCGGTATTTTGTGAGTTCTTTCTTCTTTTTCTTTTCCTCGAAAAAGAACCACTGGAGTTTTAGGTGAGATGTGACAAGTTTTGCATTTGGCAGGTTTCATGCCAAGGAATACCCAGCTTATGAAAAGGAAACTTTTCCGTGCAACATGGGTTATTGTCAAATAGGTATGACAAAGACAAACTGTTTGGTGCATCAAATGCAATTCTGTTTTCACATCATTTCCATGGACGTGAAAGGCTTTTGCTAGACCATAAGCTTTGAGCTAAAATGAAAGTTTTAGTGCTAATTGTTCTAAAAAGCCTGAAAAAGCATGATTTGTGTTGAAGCTAGATCATTTGACTCCCCATCTTGTTGAGTATGTGCTTCTTTTTAACAAACTAAATCAAATGAAGAACTTAAACAGACATTGTAGCCTCTCTTTTATTAGACCTTTTCACCTGAAGTTTGACCATTCTCTCTCTATTTGATGTGAAAACATGGAAAAAAGACTAAACTTAAGAAGAAAATATGAAAGGAGATTGAGATCTTTGGGATTTAATTATATAGTTTTCTTAAAAAATATTAATAAAAAAACTCAAAACTCCAAATGTTCTTTTCTCAATGAAAAGTTGTTTTCATTTCCTCCCTCTCTCTGCTGAAAGATAAGGAAATATTGATGTTTCTGATCTGCACTTATCCCCTTCAAAATCATTGTTTGCTAATTACTCGACTTTTTTAATGTAGGATCTAATGTATCCTATGATGATTCAATGAACTTGAGAAATATCCTCTGGCTGGCACCAATGCCCAGCAGTTCTACTAAGGACTGGGAGGCTCCAGGTAATCTTTTTCTTAGGTTGGTTTAGTGGTCAAAGGAACATACTGCAAACCTAATATCCTACTACTTGAAATCTATATGAAATTAGTTGAACAGTAAGTACACTTAATGAATATTAGATTATATCAAACTCATTTTTTTTCTTTATGGTCATAATGAAAGTTTGACTTCTTTTATCCAAAAAAAAAAAGTAAATATTCTTTTTTCATCGGTTGAAATTTTTAAGAACTGTTCATGATAGGGGTTCTTGTGGTGTTGGATGCTCATCCAGATGGAATCATATACAGAGATATCATACCTGACTATGTACATATAGCAAGAACTGTTTACGAAGGTTTTGTTTCTCTATCTTTCTCCACGATGTTGACATGAGATATTTTTTCGAACTTCCAAATTTGAGCAATGTCATACTTATCTGATCCTTAAAATTTTGGGAATTTTTGTCCATTACATTATCTAACTTTGAAGTAAGGAAAATCATTTGGTCTTTGTTGCTAACATTATTGATAGAATGTTGACATGATATACCTATCAAATAACTACTAATTTATTTGACACGACATAATAAAGCAAATCCAAGTGAATTCAATCAATTCACTTGATACATTCATTCTATTTTATATGTGTTTAGAGTAGATCAACCTTTCATGTACAACATTAATTATCGATATTGAATAGAAGCATAATTCAAAGTTCAAACATGATCTAGATCTTTTAAAGCTTAGAGACTAAATAGATCCAATGCTAGGGACTAATTATGATATTCAACCATTTTGTGCTTGAAAGTACTAAGTGGAAGCTAAACATGTGATCTTTACAGATGATCTTGGAGACACTGTGGTTGATGTCAATTACTTGGATATTGGCAATGCTTTGGCAAATTATCAAATCTTCATATGCTAA

mRNA sequence

ATGGGTAAACCTTCAATCTCTCTCAAACTCACCATTTTCCTCTCCCTCTCTCTTTCAGTCACCCCCTTTGCTCTTTTTCCCAATTACAACAAACCACCCCCAATTCCCAAAGCTACTCCCTCCGATTTGCTTAATCTTCTCGGTTCTAAATCTCAAGCTTCTTCTGTGAATCCTGGTGTAGCGAAGGAGCTGAAATCTTGTTTCAAATTCCTTGTTCCCTTCCATCCAACCCCATCCAACGCGAAATTATCCGGTAGACGGAGCTTGAGATCGACGGGATTTGATGATCGGAGTTGGAGAGAGGAGGATGAGCTCGTTTGGTGGCCACCTCAGTCGGTTCTTGAACTCGCTCGACTTGGTGTTGATTCTGGTGGAGACCCTGGGGCTATTCATCGCACCCTTGATCCTGCTATAATCCCTATACCTGACATTCATGGATCACAAAGACACAAATGCGAACTCACAAGAACGCCATATGGGAGACGCTTTATAAGCGAGGAACTAAATTCATACCTTCAGTTCCTGTTTGAGTTCATTGCTGCTCGATCTTCTGCTATGGGGTTTAACATTAAATTGAACCGTTTCGATTTATTCCATGGTCATCTTTTTCTTGCCTTTGACAACAACAGGCTCGGTATTTTGTTTCATGCCAAGGAATACCCAGCTTATGAAAAGGAAACTTTTCCGTGCAACATGGGTTATTGTCAAATAGGATCTAATGTATCCTATGATGATTCAATGAACTTGAGAAATATCCTCTGGCTGGCACCAATGCCCAGCAGTTCTACTAAGGACTGGGAGGCTCCAGGGGTTCTTGTGGTGTTGGATGCTCATCCAGATGGAATCATATACAGAGATATCATACCTGACTATGTACATATAGCAAGAACTGTTTACGAAGATGATCTTGGAGACACTGTGGTTGATGTCAATTACTTGGATATTGGCAATGCTTTGGCAAATTATCAAATCTTCATATGCTAA

Coding sequence (CDS)

ATGGGTAAACCTTCAATCTCTCTCAAACTCACCATTTTCCTCTCCCTCTCTCTTTCAGTCACCCCCTTTGCTCTTTTTCCCAATTACAACAAACCACCCCCAATTCCCAAAGCTACTCCCTCCGATTTGCTTAATCTTCTCGGTTCTAAATCTCAAGCTTCTTCTGTGAATCCTGGTGTAGCGAAGGAGCTGAAATCTTGTTTCAAATTCCTTGTTCCCTTCCATCCAACCCCATCCAACGCGAAATTATCCGGTAGACGGAGCTTGAGATCGACGGGATTTGATGATCGGAGTTGGAGAGAGGAGGATGAGCTCGTTTGGTGGCCACCTCAGTCGGTTCTTGAACTCGCTCGACTTGGTGTTGATTCTGGTGGAGACCCTGGGGCTATTCATCGCACCCTTGATCCTGCTATAATCCCTATACCTGACATTCATGGATCACAAAGACACAAATGCGAACTCACAAGAACGCCATATGGGAGACGCTTTATAAGCGAGGAACTAAATTCATACCTTCAGTTCCTGTTTGAGTTCATTGCTGCTCGATCTTCTGCTATGGGGTTTAACATTAAATTGAACCGTTTCGATTTATTCCATGGTCATCTTTTTCTTGCCTTTGACAACAACAGGCTCGGTATTTTGTTTCATGCCAAGGAATACCCAGCTTATGAAAAGGAAACTTTTCCGTGCAACATGGGTTATTGTCAAATAGGATCTAATGTATCCTATGATGATTCAATGAACTTGAGAAATATCCTCTGGCTGGCACCAATGCCCAGCAGTTCTACTAAGGACTGGGAGGCTCCAGGGGTTCTTGTGGTGTTGGATGCTCATCCAGATGGAATCATATACAGAGATATCATACCTGACTATGTACATATAGCAAGAACTGTTTACGAAGATGATCTTGGAGACACTGTGGTTGATGTCAATTACTTGGATATTGGCAATGCTTTGGCAAATTATCAAATCTTCATATGCTAA

Protein sequence

MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGVAKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLGVDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIAARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSNVSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYEDDLGDTVVDVNYLDIGNALANYQIFIC*
Homology
BLAST of CsaV3_1G038840 vs. NCBI nr
Match: XP_004135610.1 (uncharacterized protein LOC101205785 [Cucumis sativus] >KGN66065.1 hypothetical protein Csa_006870 [Cucumis sativus])

HSP 1 Score: 677.9 bits (1748), Expect = 4.2e-191
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0

Query: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60
           MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV
Sbjct: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60

Query: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120
           AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG
Sbjct: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120

Query: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180
           VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA
Sbjct: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180

Query: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240
           ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN
Sbjct: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240

Query: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300
           VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE
Sbjct: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300

Query: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 328
           DDLGDTVVDVNYLDIGNALANYQIFIC
Sbjct: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 327

BLAST of CsaV3_1G038840 vs. NCBI nr
Match: XP_008450628.1 (PREDICTED: uncharacterized protein LOC103492159 [Cucumis melo] >KAA0050901.1 T-box protein 41 [Cucumis melo var. makuwa] >TYK10252.1 T-box protein 41 [Cucumis melo var. makuwa])

HSP 1 Score: 649.0 bits (1673), Expect = 2.1e-182
Identity = 314/327 (96.02%), Postives = 318/327 (97.25%), Query Frame = 0

Query: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60
           MGK SISLK TIFLSLSLSVTPFALF NYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV
Sbjct: 1   MGKSSISLKFTIFLSLSLSVTPFALFTNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60

Query: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120
           AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRS REEDELVWWPPQSVLELARLG
Sbjct: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSRREEDELVWWPPQSVLELARLG 120

Query: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180
           VDSGGDPGAIHRTLDPAIIPIPDIHGSQ HKCELTRTPYGRRFISEELNSYLQ LFE IA
Sbjct: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQSHKCELTRTPYGRRFISEELNSYLQVLFELIA 180

Query: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240
            RSSAMG NIKLNRFDLFHGHLFLAFDNNRLGILFHAKE+PAY+K+TFPCNMGYCQIGSN
Sbjct: 181 TRSSAMGINIKLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDKKTFPCNMGYCQIGSN 240

Query: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300
           VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIART+YE
Sbjct: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTIYE 300

Query: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 328
           DDLGDTVVDVNYLDIGNALANYQIFIC
Sbjct: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 327

BLAST of CsaV3_1G038840 vs. NCBI nr
Match: XP_038878944.1 (uncharacterized protein LOC120071032 [Benincasa hispida])

HSP 1 Score: 601.7 bits (1550), Expect = 3.9e-168
Identity = 292/327 (89.30%), Postives = 303/327 (92.66%), Query Frame = 0

Query: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60
           MG PSIS + TIFLSLSLSVTPFAL   YNK  PIPKATPSDLLNLLGSKSQASSVNP V
Sbjct: 1   MGNPSISFRFTIFLSLSLSVTPFALSSYYNKRSPIPKATPSDLLNLLGSKSQASSVNPSV 60

Query: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120
           AKELKSCFKFLVPFH TP  AK S RRSLRST FD+RS REEDELVWWPPQSVLELARLG
Sbjct: 61  AKELKSCFKFLVPFHSTPYIAKFSSRRSLRSTRFDNRSRREEDELVWWPPQSVLELARLG 120

Query: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180
           VDSGGDPGAIHRTLDPAIIPIPDIHGS+RHKCELTRTPYGRRFISEELNSYLQFLFE I 
Sbjct: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSRRHKCELTRTPYGRRFISEELNSYLQFLFELIV 180

Query: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240
           ARSSAMG NI LNRFDLFHGHLFLAFDNNRLGILFHAKE+PAY+++ FPCNMGYCQIGSN
Sbjct: 181 ARSSAMGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPCNMGYCQIGSN 240

Query: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300
           VSYDDSMNLRNILWLAPMPS+STKDWEAPGVLVVLDA PDGIIY+DIIP+YVHIART+YE
Sbjct: 241 VSYDDSMNLRNILWLAPMPSNSTKDWEAPGVLVVLDARPDGIIYKDIIPNYVHIARTIYE 300

Query: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 328
           DDLGDTVVDVNYLD GNA ANYQIFIC
Sbjct: 301 DDLGDTVVDVNYLDTGNAFANYQIFIC 327

BLAST of CsaV3_1G038840 vs. NCBI nr
Match: XP_023515948.1 (uncharacterized protein LOC111779958 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 587.8 bits (1514), Expect = 5.8e-164
Identity = 280/327 (85.63%), Postives = 302/327 (92.35%), Query Frame = 0

Query: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60
           MG PSISL+ T+FLSLSLS+TPFAL  NY KP PIPKA PSDLLNLLGSKSQAS+VNP V
Sbjct: 1   MGNPSISLRFTMFLSLSLSITPFALSHNYTKPSPIPKAAPSDLLNLLGSKSQASTVNPSV 60

Query: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120
           AKE+KSCFKFLVPFHPTPS AK S RRSLRS+ FDDRS REEDELVWWPPQSVLELARL 
Sbjct: 61  AKEIKSCFKFLVPFHPTPSIAKCSSRRSLRSSRFDDRSRREEDELVWWPPQSVLELARLA 120

Query: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180
           VDSGGDPGAIHRTLDPAIIPIP++HGS++HKCELTRTPYGRRFISEELNSYL+FLFE IA
Sbjct: 121 VDSGGDPGAIHRTLDPAIIPIPNVHGSKKHKCELTRTPYGRRFISEELNSYLKFLFELIA 180

Query: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240
           ARS+AMG N+ LNRFDLFHGHLFLAFDNNRLGILFHAKE+PAY+++ FP NMGYCQIGSN
Sbjct: 181 ARSAAMGLNVTLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSN 240

Query: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300
           V YD SMN+RNILWLAP+PS+STKDWEAPGVLVVLDA PDGIIYRDIIPDYVHIART+YE
Sbjct: 241 VPYDASMNMRNILWLAPIPSNSTKDWEAPGVLVVLDARPDGIIYRDIIPDYVHIARTIYE 300

Query: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 328
           DDLGD VVDVNYLD GNA+ NYQIFIC
Sbjct: 301 DDLGDAVVDVNYLDTGNAVPNYQIFIC 327

BLAST of CsaV3_1G038840 vs. NCBI nr
Match: XP_022968759.1 (uncharacterized protein LOC111467901 [Cucurbita maxima])

HSP 1 Score: 584.7 bits (1506), Expect = 4.9e-163
Identity = 277/327 (84.71%), Postives = 301/327 (92.05%), Query Frame = 0

Query: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60
           MG PSISL+ T+FLSLSLS+TPFAL  NY KP PIPKA PSDLLNLLGSKSQAS+VNP V
Sbjct: 1   MGNPSISLRFTMFLSLSLSITPFALSHNYTKPSPIPKAAPSDLLNLLGSKSQASTVNPSV 60

Query: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120
           AKE++SCFKFLVPFHPTPS  K S RRSLRS+ FDDRS REEDELVWWPPQSVLELARL 
Sbjct: 61  AKEIRSCFKFLVPFHPTPSIVKFSSRRSLRSSRFDDRSRREEDELVWWPPQSVLELARLA 120

Query: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180
           VDSGGDPGAIHRTLDPAIIPIP++HGS++HKCELTRTPYGRRFISEELNSYL+FLFE IA
Sbjct: 121 VDSGGDPGAIHRTLDPAIIPIPNVHGSKKHKCELTRTPYGRRFISEELNSYLKFLFELIA 180

Query: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240
           ARS+AMG N+ LNRFDLFHGHLFL+FDNNRLGILFHAKE+PAY+++ FP NMGYCQIGSN
Sbjct: 181 ARSAAMGLNVTLNRFDLFHGHLFLSFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSN 240

Query: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300
           V YD SMN+RNILWLAP+PS+STKDWEAPGVLVVLDA PDGIIYRDIIPDYVHIART+YE
Sbjct: 241 VPYDASMNMRNILWLAPIPSNSTKDWEAPGVLVVLDARPDGIIYRDIIPDYVHIARTIYE 300

Query: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 328
           DDLGD VVDVNYLD GNA+ NYQIFIC
Sbjct: 301 DDLGDAVVDVNYLDTGNAMPNYQIFIC 327

BLAST of CsaV3_1G038840 vs. ExPASy TrEMBL
Match: A0A0A0LW06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569420 PE=4 SV=1)

HSP 1 Score: 677.9 bits (1748), Expect = 2.1e-191
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0

Query: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60
           MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV
Sbjct: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60

Query: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120
           AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG
Sbjct: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120

Query: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180
           VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA
Sbjct: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180

Query: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240
           ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN
Sbjct: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240

Query: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300
           VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE
Sbjct: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300

Query: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 328
           DDLGDTVVDVNYLDIGNALANYQIFIC
Sbjct: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 327

BLAST of CsaV3_1G038840 vs. ExPASy TrEMBL
Match: A0A5D3CG84 (T-box protein 41 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004000 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.0e-182
Identity = 314/327 (96.02%), Postives = 318/327 (97.25%), Query Frame = 0

Query: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60
           MGK SISLK TIFLSLSLSVTPFALF NYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV
Sbjct: 1   MGKSSISLKFTIFLSLSLSVTPFALFTNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60

Query: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120
           AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRS REEDELVWWPPQSVLELARLG
Sbjct: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSRREEDELVWWPPQSVLELARLG 120

Query: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180
           VDSGGDPGAIHRTLDPAIIPIPDIHGSQ HKCELTRTPYGRRFISEELNSYLQ LFE IA
Sbjct: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQSHKCELTRTPYGRRFISEELNSYLQVLFELIA 180

Query: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240
            RSSAMG NIKLNRFDLFHGHLFLAFDNNRLGILFHAKE+PAY+K+TFPCNMGYCQIGSN
Sbjct: 181 TRSSAMGINIKLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDKKTFPCNMGYCQIGSN 240

Query: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300
           VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIART+YE
Sbjct: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTIYE 300

Query: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 328
           DDLGDTVVDVNYLDIGNALANYQIFIC
Sbjct: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 327

BLAST of CsaV3_1G038840 vs. ExPASy TrEMBL
Match: A0A1S3BQN4 (uncharacterized protein LOC103492159 OS=Cucumis melo OX=3656 GN=LOC103492159 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.0e-182
Identity = 314/327 (96.02%), Postives = 318/327 (97.25%), Query Frame = 0

Query: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60
           MGK SISLK TIFLSLSLSVTPFALF NYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV
Sbjct: 1   MGKSSISLKFTIFLSLSLSVTPFALFTNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60

Query: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120
           AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRS REEDELVWWPPQSVLELARLG
Sbjct: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSRREEDELVWWPPQSVLELARLG 120

Query: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180
           VDSGGDPGAIHRTLDPAIIPIPDIHGSQ HKCELTRTPYGRRFISEELNSYLQ LFE IA
Sbjct: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQSHKCELTRTPYGRRFISEELNSYLQVLFELIA 180

Query: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240
            RSSAMG NIKLNRFDLFHGHLFLAFDNNRLGILFHAKE+PAY+K+TFPCNMGYCQIGSN
Sbjct: 181 TRSSAMGINIKLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDKKTFPCNMGYCQIGSN 240

Query: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300
           VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIART+YE
Sbjct: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTIYE 300

Query: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 328
           DDLGDTVVDVNYLDIGNALANYQIFIC
Sbjct: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 327

BLAST of CsaV3_1G038840 vs. ExPASy TrEMBL
Match: A0A6J1I0L2 (uncharacterized protein LOC111467901 OS=Cucurbita maxima OX=3661 GN=LOC111467901 PE=4 SV=1)

HSP 1 Score: 584.7 bits (1506), Expect = 2.4e-163
Identity = 277/327 (84.71%), Postives = 301/327 (92.05%), Query Frame = 0

Query: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60
           MG PSISL+ T+FLSLSLS+TPFAL  NY KP PIPKA PSDLLNLLGSKSQAS+VNP V
Sbjct: 1   MGNPSISLRFTMFLSLSLSITPFALSHNYTKPSPIPKAAPSDLLNLLGSKSQASTVNPSV 60

Query: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120
           AKE++SCFKFLVPFHPTPS  K S RRSLRS+ FDDRS REEDELVWWPPQSVLELARL 
Sbjct: 61  AKEIRSCFKFLVPFHPTPSIVKFSSRRSLRSSRFDDRSRREEDELVWWPPQSVLELARLA 120

Query: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180
           VDSGGDPGAIHRTLDPAIIPIP++HGS++HKCELTRTPYGRRFISEELNSYL+FLFE IA
Sbjct: 121 VDSGGDPGAIHRTLDPAIIPIPNVHGSKKHKCELTRTPYGRRFISEELNSYLKFLFELIA 180

Query: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240
           ARS+AMG N+ LNRFDLFHGHLFL+FDNNRLGILFHAKE+PAY+++ FP NMGYCQIGSN
Sbjct: 181 ARSAAMGLNVTLNRFDLFHGHLFLSFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSN 240

Query: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300
           V YD SMN+RNILWLAP+PS+STKDWEAPGVLVVLDA PDGIIYRDIIPDYVHIART+YE
Sbjct: 241 VPYDASMNMRNILWLAPIPSNSTKDWEAPGVLVVLDARPDGIIYRDIIPDYVHIARTIYE 300

Query: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 328
           DDLGD VVDVNYLD GNA+ NYQIFIC
Sbjct: 301 DDLGDAVVDVNYLDTGNAMPNYQIFIC 327

BLAST of CsaV3_1G038840 vs. ExPASy TrEMBL
Match: A0A6J1HA77 (uncharacterized protein LOC111462023 OS=Cucurbita moschata OX=3662 GN=LOC111462023 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.2e-162
Identity = 278/327 (85.02%), Postives = 300/327 (91.74%), Query Frame = 0

Query: 1   MGKPSISLKLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGV 60
           MG PSISL+ T+FLSLSLS+TPFAL  NY KP PIPKA PSDLLNLLGSKSQAS+VNP V
Sbjct: 1   MGNPSISLRFTMFLSLSLSITPFALSHNYTKPSPIPKAAPSDLLNLLGSKSQASTVNPSV 60

Query: 61  AKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLG 120
           AKE++SCFKFLVPFHPTPS AK S RRSLRS+ FDDRS REEDELVWWPPQSVLELARL 
Sbjct: 61  AKEIRSCFKFLVPFHPTPSIAKCSSRRSLRSSRFDDRSRREEDELVWWPPQSVLELARLA 120

Query: 121 VDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIA 180
           VDSGGDPGAIHRTLDPAIIPIP++HGS++HKCELTRTPYGRRFISEELNSYL+FLFE IA
Sbjct: 121 VDSGGDPGAIHRTLDPAIIPIPNVHGSKKHKCELTRTPYGRRFISEELNSYLKFLFELIA 180

Query: 181 ARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSN 240
           ARS+A+G NI LNRFDLFHGHLFLAFDNNRLGILFHAKE+PAY+++ FP NMGYCQIGSN
Sbjct: 181 ARSAALGLNITLNRFDLFHGHLFLAFDNNRLGILFHAKEFPAYDEKAFPYNMGYCQIGSN 240

Query: 241 VSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIARTVYE 300
           V YD SMN+RNILWLAP+PS STKDWEA GVLVVLDA PDGIIYRDIIPDYVHIART+YE
Sbjct: 241 VPYDASMNMRNILWLAPIPSKSTKDWEAQGVLVVLDARPDGIIYRDIIPDYVHIARTIYE 300

Query: 301 DDLGDTVVDVNYLDIGNALANYQIFIC 328
           DDLGD VVDVNYLD GNA+ NYQIFIC
Sbjct: 301 DDLGDAVVDVNYLDTGNAVPNYQIFIC 327

BLAST of CsaV3_1G038840 vs. TAIR 10
Match: AT5G27710.1 (unknown protein; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 414.8 bits (1065), Expect = 6.2e-116
Identity = 199/330 (60.30%), Postives = 250/330 (75.76%), Query Frame = 0

Query: 6   ISLKLTIFLSLSL-SVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGVAKEL 65
           + L+ TIF+S S+ + + F L    + P   PKAT  DLL++LG  S AS +NP V++E+
Sbjct: 6   VPLRFTIFISFSIAAASSFKLHSASHSPSSFPKATGDDLLSVLGPPSAASCLNPIVSREI 65

Query: 66  KSCFKFLVPF---HPTPSNAKLSGRRSLRSTGFD----DRSWREEDELVWWPPQSVLELA 125
           KSC KFLVPF    P P   + S R  L S   D       + EE+ L+WWPP+SVLELA
Sbjct: 66  KSCLKFLVPFKSDKPKPEFGRCSPRTGLCSGKIDAVERRSKFEEENSLIWWPPESVLELA 125

Query: 126 RLGVDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFE 185
           RL VDSGGDPG+I RTL+P +IP+PD+  S++ KC+LTRTPYGR FI+EE+NSY +FLF 
Sbjct: 126 RLAVDSGGDPGSIQRTLNPKMIPVPDVERSRKDKCQLTRTPYGRHFIAEEVNSYFEFLFH 185

Query: 186 FIAARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQI 245
            I +R  ++G N+ L+R+DLFHGHLFLA ++ RLGILFHAKEYPAY+K+ FP NMGYCQ 
Sbjct: 186 LIESRGPSVGLNVSLSRYDLFHGHLFLASESGRLGILFHAKEYPAYDKKVFPYNMGYCQR 245

Query: 246 GSNVSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLDAHPDGIIYRDIIPDYVHIART 305
           GS+V Y+DSMNLRNILWLAP+PS+S+ DW APGVLVVLDAHPDGIIYRD+IPDYV   RT
Sbjct: 246 GSDVKYNDSMNLRNILWLAPLPSNSSPDWVAPGVLVVLDAHPDGIIYRDLIPDYVKFVRT 305

Query: 306 VYEDDLGDTVVDVNYLDIGNALANYQIFIC 328
           +YEDDLG T VDVNYL++G    +YQ+F+C
Sbjct: 306 IYEDDLGTTAVDVNYLNVGAHEPDYQLFMC 335

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004135610.14.2e-191100.00uncharacterized protein LOC101205785 [Cucumis sativus] >KGN66065.1 hypothetical ... [more]
XP_008450628.12.1e-18296.02PREDICTED: uncharacterized protein LOC103492159 [Cucumis melo] >KAA0050901.1 T-b... [more]
XP_038878944.13.9e-16889.30uncharacterized protein LOC120071032 [Benincasa hispida][more]
XP_023515948.15.8e-16485.63uncharacterized protein LOC111779958 [Cucurbita pepo subsp. pepo][more]
XP_022968759.14.9e-16384.71uncharacterized protein LOC111467901 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LW062.1e-191100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569420 PE=4 SV=1[more]
A0A5D3CG841.0e-18296.02T-box protein 41 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G0040... [more]
A0A1S3BQN41.0e-18296.02uncharacterized protein LOC103492159 OS=Cucumis melo OX=3656 GN=LOC103492159 PE=... [more]
A0A6J1I0L22.4e-16384.71uncharacterized protein LOC111467901 OS=Cucurbita maxima OX=3661 GN=LOC111467901... [more]
A0A6J1HA771.2e-16285.02uncharacterized protein LOC111462023 OS=Cucurbita moschata OX=3662 GN=LOC1114620... [more]
Match NameE-valueIdentityDescription
AT5G27710.16.2e-11660.30unknown protein; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35759BNAA09G03860D PROTEINcoord: 1..327

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G038840.1CsaV3_1G038840.1mRNA