CsaV3_1G037430 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G037430
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B
Locationchr1: 23333879 .. 23339862 (-)
RNA-Seq ExpressionCsaV3_1G037430
SyntenyCsaV3_1G037430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAACACATGGGTGGTTAAATTGACAATGTGGTAACGCTAACTACAAAATCATTTTCCATCCATCATGTATGAACAAATTGGTACCTCTTTATTTGGACCCTAAAAATAAAATAAATTAAAAAGAAAGGGGAAAACTCTTCAGTTCATCGGCAGCGTGTAAGTTAGCATTTCTTACCCTAACACTCCACTATCAAGTCTGCGTTTCTCTCAGATTCTCACTCTTAGTTTACGGGATTCGACCTAGTGGATTCAAAGGTTTGAAATTTTCTAATTCAGAAGCCTTTTTTTTTTCTGGCACGTTGTGGATGCAAAATTTTGTTGCCGATGATACCAAGCTAAATTATCTGTGTTCTGTTGTTTTGAATTGATCGAATTAGAGATGGCGAGCGCTGTAGATGCTGCAGGAGATCCAATTCCTACATCGGCGGTGCTAATGTCCTCCTCAAAGCACATTGCGATCAAGTGTCGGTCGGAGAATGTGGCATACCTCCAGTGCAAACAGAAGGATCCCAACCCGGAGAAATGCCTGGACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTGTAAGCGAATAACATTTTACTATTTTCTTTGGCTAAGTACGATTTCCCATTTCTCTGGAAAATTGCTTTAGTTATCATATGATCGTCTTCTGATCTGCTAGCAAATAGGGGGATGGGAAATACATTGCTTTAGTAATCATATGATAGGAAACACAGAACCAGGAAACTGGAAAGAAAATAAGTCGTATTTCTTAGGTTGTTACTCATTTATTGGTTAAGTGGAAAATCACCTCTCTTCCCCTTTTCAATGGTGGTTTGGAGATAGGGTCTCTTAAAAACAAAATTCTTGCTCTTCTCTCAAAATGGCTGTGGAGATTATCGATAGAGAGGAAGGCCCTTTGGAGAAAAGTGGTAAGCAGAATTTATGGTGAAGGGTTTCAAGGATGGAGAATCCTTAGCCTAAAGGTTGCTCCAAAAAGAACAGCCCATGGTTTGACACCTTTGTTTCGTAAGTTTGTTAAACTCAAAGCTGGAAGTGGGCAGGAGATTTTCTTTCAGTAGGATGTGTGGATTGGGGAATCCCTTCATGAAGATTTTCCATAAATTTATAGCTTCTCTTAGGAAAGAGGCAATAGTTGCAGATTGTTGAGTTTATATTAATGAAACATGGAATTGGGCATTTGGAGAGGCACCTTTGGTTGCCAGCTCCAAGCTTGGATTGCTTTGATTGGCAAATTGGATGCTTTTCGCTTGGGGTAAGGTGGACTTATTTGGTGCTTTCTCTTCAAGAACACTTCTTTTGAAGTTTGATGGAAATAGGTCGACGTTCAGGCATACTACAACTGATTCAATTTGAAAATTTAAAATTCTTAAGGTGAAGGTGTTTTCATGTTGCGTCTCACGTAAGCTTTGATACTCAAAATGTGATGCAAAAGAAATGTTATTTGACTGCTTTAAGCCTGTCATTGTGCGGGTAATCCTTAGATCATATTTTTCTGCACTGCTTAGTTGCTTGGCAATGCTGGATTTGCCTCTTCAAAGATTTTGGGATTGTCACCTGCATCCCTCACAGGATCATATTTTTCTGCACTGCTTAGTTGCTTGGCAATGCTGGATTTGCCTCTTCAAAGATTTTGGGATTGTCACCTGCATCCCTCACTCTGTGAATGAATGATTGTTTGAAGTTATAAATAGTTGGCCCTTGAAAGGAAAAGGCAATATTCTTTGGAAGTGTGTTGTTGGAGCCACTTATTGGGTTAACTTTTGAATTGAACATGAGTATCCCTACTCTTTCTACTTTTGGAATTGCCAAAGGCCTTTTTGTTCTCCTCTCTTTGAAAGGTGGAATCCCAAAGAAGTTTGAAGTTTTCGCCTAATATCTTTTGCATGAGAAAATCAACACTTTGGATCACATTCAGAGGTGTTCCCCTGTGTATTTGGTGTTGCTATGGTGTGTTTTGTGCATGGGAGATTCTAAGGATCTTGATAATTTATTTTGGAATTGCCAGTTCGTGCAATTGATCTAGGACCGGTTTTTGGATTACTTTGGGGTTTCTTGTGTTATAATAGAGATTGTTGGTTTATGTCTGAGGAGGTCATGTTGTTCCTTCCTTTTGAGGAAAAGGGGGAAGTTCTTTGGCAAGCTTGTTTTTGGTTTGAAAGAAATCCTAGGATTTTTAGGGGTAGATTGGTCTTGGGATGTTCTGTGGGATACTATGAGATGCAATACTTCTTTATTTATGGGTGGTGGTGTCACAGGGTGGAGGTTTTAGGGGTTTGACACGTGGCCTGTAAGGACTTTTGTAATTATTAGTTAGGTGTTACTCTTTTGAATTGGGAGCCCTTTTTTAGGTTTTTGGCCCTTTCATGTGACCTGTTTTTTGTATGCCCGGGTATATCCTTTTATGTTTCTTAGTAAAAGTTTAATTTCTTATTAAAAATTAAAATTAGAAAAAGGATAATTTTAATGGAGTCAGATATGGTTTATGATTTAAGATCAGTAGTATGGATTCTGGTCCAACTCTCATGGCCAAGAATGAAGCCTCATGGAAATTCTACTGCTTTTTATTGGTGCAAGGATAAACACCCTTGTAATTATTTTAACTTGTCTTATTTATTCTCCAATTGGAAATATTTATTGTAATTGCATATTGGCTTTTGGGGTTTTCTGTTTTTCATTAATCAATGAAATGTTTCTTAACCCTCACGAAAGAGTCATACGAAGAAGCACTATGTTTTTTTATTCTGTACAGAAAGTATTCCTCATTCACTCAAAAACATTGCCTCCATTCCACTCTTCTCCAAATTGTATATTCTATAAATAATTTTTTTCCAAATATTTCTAGATGATTGTGTAATTGTTGTTTTAGTTTATGAGACTAATTCAAGGATACCAGCCGATAGAAGCCTTGTGGCCTAGTAACAGGTGGACTGAACAGAATAAACTAATTTGTAACTAACTAGCTTGTTTAGTGAAGATCATTTCATGGAACAGTGGGCTGTTTGCCCCTAGGATTAGAGAGGAGTAGCCCACTCCATGTTTGGCTCAAGTATTATCATAATTTTAGGATTAGGAGTTTCCTAATCCTAGTATTATGATAATACTCGTTCTCACTTTCCTTTCTCCTCTACCTATCTCACTTAGCTCCAAATATTTATCAAGTAAAAGTAGAAGTCTAAGCCAAAGCAGAAATCCCAGTAGCAGCCACCACAAAAGGAAGCAACATCGACAAAAGCTGAGATAATAGTCTGCACCCCAAATGCAGACTATTATAATCCTCAGACTATTATAATACCTAGACTATTATAAGTTACTTCTCACCCCAAACGCCCCCAACGATTATTTTTTTATTATTTAATCTTTAAATAATAGCACATGGGCACTCAAAGGATTTTTTAGAACAAATAACTTAGTTGGTTTGACCGTTTTGAACCGTTCAAGTTTAGCTGGATTGAAAACCTCAAATGGTGTTCCTTGTCAGAATTTATTGATGATTTATCTTTCTAGAATATTCGTTTGAATTGAGATGCTTTCATGTTCCAAATTTAGTTGATATTTCTCTCTTATCTTTTGTCCACTCCCTTTGGGATGTTTGTATAACTGAACATTTTTGTTTGTTTGTTTAATTTCCTTTGATCGGTAAAAGGTTTTGTATCTGTTTAAATGAAGAAAAAAATCATGGATATTAGTGAATGCTATTAGAAATATGTGGGGTTGGATGTCAATCATAAATGAACAATTTTTGGATGCAAAAGCTTTTGCTTGATTTTCTAAATGCTTGATCAATTATGATTACTGCACATCTGAATACTTTTTATGTTGAGACTTGTTGGTGATATATAATCAAATTTGTCTTCAACAACCAGCTTAAGCTTTTGGGTGAATTGGTGGTTTAAAATGGTATTAGAGCAGGTGGTCTAGGGAGCTCCTGACTTCAAGCCCCTGCATTGTCGTTTCCTCCCCAATAAAATCGATTTCCACTTGTTGGGCCTTTCAAAAATATTTCAATCCCACAAGTGAGATAAAATTGATTCCACTAGTTAGACCATTCAAATATTTCAAGCCCATAAGTGAGGGAGGGTTGGTGATATATAATTAAATTTTCCTTCAACCACCACCTTAAGCTTTTGAGTGAATTGGTGGTTTAATAAGACTTTTTATTTGGATTTGTAATTATCTTGATTTTCCATTTTCTACCTTCTAACTTCTAAGAAATGAAATCCTTCTGCAGTGTTGGGTATAGGGGTATTTCAGTGGTTGAATATGTGGCTGTGAAATGGTGAACCTAATATTAAACGGTTGATGAAGATAATTCTGACTCTGCGTTGTTTTCTTGTTTTCCTATGTTCTTCCTGGACAAACGGTACTGCAGCATCGATTATGGGCATTCTATTGGTTTTGATATCCATGAAGTAGTATTTCCACTATTTTTTTTTTCAATTGGAAAGTAAGAAATATGGCATTTCATTTTATAAATGAAGTTAAACAGGGGTGGAGTGCCAACCCCACAAAGGGGGCAGGTTGTACCAAATCCCTTCAATTAGCTGAAATTTCATAAAAGAGTAGTAGATGAATTTTGGAAGGTACACTACGAACTAGGGTTATTGGTATGATCATCCCTAACCCCTAAACTGATTAAGATGTTCAAAACATTCAATGATTTTTTTTCTCAGACATATTGAATTACAATTGCAAGTTATTTGTTTTTGCTTTCAAAGAGTACATTCTTTTTTCCGAATTACAAGTTATCTTTTCAACCATTAACATCATACTTTAGATTTTGTGACTGCTATAGAATAGTTATTGACAATGCTTGTTATAGTTAATGAAAAAAAGAAAAAGGAAGAATATCCATTTTTCTTTAGTTTGTTGATATAGTCTTTTTTTCACCAATCTTTTTGGCCTATTTCCTCTGGTTGGTTTGGATGTGTCAACTTTTAGCGCATGAGACTGCAGGCACTAGTCATTACCATTCTCTATTTTCTTGTCTTCTACAATTATTCCTTGTTTCACTTTTTTATAACCTTTTTAGCTGGATATTTTGTGAGAGACATCCTTTCATTTCATCTTTTGCATTCTCTCTCATCATACAATCACTTGCCATACCTCTCATCAGTTTCACTTCTGACAACTATACCTGTTTATACCTAATTTCTGCATCCGTTTGAGAGGTTTAATGCTCTTCCTGTCGAGTTTCGTAACTAGATCTTTTTGTAACTGTAGTCTTGATTTGATTCAATTAGATTAGAATCCGTTCTTTTTATGTATTTGTATGTTCTTTTATTTTGTTCAACGACAGTTTGGCTTCTTAAAATGAAAAAGAAAATTAATTAATGGAAAGGCTGCTTTTGTTTGCAGGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCGTATGTCGGGTGTATGTACTACCATACTAATGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGGTTGTCCCTTGGAATGATCTTCTTCATTTATGTAAACTGTTTCCAATAAAATTTTCTTGTTTGCAAAATGAGCAAGTACTGTTGTTATTCCCTTTCCCTCTCTGAGTTAACCTTATTTTCTTTAAACAATGCGCTCCTTTGTGTATGTCTCGGATTGCGAACCCGATACATTGTTGCAAACAAAAGATAAACCAATCTTTTTGCCATCCCCTTCTCTGATTACTGTCATTAGTAATCTACCTTATTGCTTCTTAAAGTTTTCCTATTCAAAATATCTGGTGATTTGCTTCATGAAAATTAATGTAGAAATTCATGTTCAATTTGTTTTGGTGGACTTGTAAAGATCTGCCTTCAATTCTAACAGTGAAGTTCAAGCAACAAATGCATTTGATAATTGAGAGCATACTCGGTTTCAATCTCTCAGCATCTTGTAAAATACCAGCTTACGATTCTTTTGGATCAAGTTCCTTTTTTTCTTAAGAAAATTTAGCGGGGATTTATT

mRNA sequence

ATGGCGAGCGCTGTAGATGCTGCAGGAGATCCAATTCCTACATCGGCGGTGCTAATGTCCTCCTCAAAGCACATTGCGATCAAGTGTCGGTCGGAGAATGTGGCATACCTCCAGTGCAAACAGAAGGATCCCAACCCGGAGAAATGCCTGGACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCGTATGTCGGGTGTATGTACTACCATACTAATGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGGTTGTCCCTTGGAATGA

Coding sequence (CDS)

ATGGCGAGCGCTGTAGATGCTGCAGGAGATCCAATTCCTACATCGGCGGTGCTAATGTCCTCCTCAAAGCACATTGCGATCAAGTGTCGGTCGGAGAATGTGGCATACCTCCAGTGCAAACAGAAGGATCCCAACCCGGAGAAATGCCTGGACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCGTATGTCGGGTGTATGTACTACCATACTAATGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGGTTGTCCCTTGGAATGA

Protein sequence

MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE*
Homology
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BLAST of CsaV3_1G037430 vs. NCBI nr
Match: XP_004135555.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus] >XP_008445083.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis melo] >KGN65934.1 hypothetical protein Csa_023175 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 1.9e-55
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106

[Close]
BLAST of CsaV3_1G037430 vs. NCBI nr
Match: XP_038893587.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Benincasa hispida])

HSP 1 Score: 217.2 bits (552), Expect = 6.7e-53
Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAV+AAGDPIPTSAVLMSSSKHIA KCRSENVAYLQCKQKDPNPEKCL+KGHQVTRCV
Sbjct: 1   MASAVNAAGDPIPTSAVLMSSSKHIANKCRSENVAYLQCKQKDPNPEKCLEKGHQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKACPLE 106

[Close]
BLAST of CsaV3_1G037430 vs. NCBI nr
Match: XP_038906805.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Benincasa hispida])

HSP 1 Score: 215.7 bits (548), Expect = 1.9e-52
Identity = 101/106 (95.28%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIA +CR ENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIANRCRLENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQE FEK CPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQETFEKACPLE 106

[Close]
BLAST of CsaV3_1G037430 vs. NCBI nr
Match: XP_022958837.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata] >XP_023006426.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita maxima] >XP_023548394.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita pepo subsp. pepo] >KAG7013612.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIA  CRSENVAYLQCK+KDPNPEKCLDKG QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTK+MDAYVGCMYY+TNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKDMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 106

[Close]
BLAST of CsaV3_1G037430 vs. NCBI nr
Match: XP_022930219.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata] >XP_022930220.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita moschata] >XP_023000580.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita maxima] >XP_023000581.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita maxima] >XP_023514408.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.5 bits (532), Expect = 1.4e-50
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIA  CRSENVAYLQCK+KDPNPEKCL+KG QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTKEMDAYVGCMYY+TNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 106

[Close]
BLAST of CsaV3_1G037430 vs. ExPASy Swiss-Prot
Match: Q8LGE7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis thaliana OX=3702 GN=At5g18800 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.1e-45
Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           M+SAVDA G+PIPTSAVL +S+KHI ++C  ENVA+L+CK+ DPNPEKCLDKG  VTRCV
Sbjct: 1   MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           L LLKDLHQ+C KEMD YVGCMYY+TNEFDLCRKEQEAFEK CPL+
Sbjct: 61  LGLLKDLHQKCQKEMDDYVGCMYYYTNEFDLCRKEQEAFEKVCPLK 106

[Close]
BLAST of CsaV3_1G037430 vs. ExPASy Swiss-Prot
Match: Q9SQT4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A OS=Arabidopsis thaliana OX=3702 GN=At3g06310 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 5.9e-44
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 3   SAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLS 62
           +AVD  G+PIPTSAVL +S+KHI I+C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL 
Sbjct: 5   AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63  LLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LLKDLHQRC KEMDAYVGCMYY+TNEF+LCRKEQEAFEK CPL+
Sbjct: 65  LLKDLHQRCPKEMDAYVGCMYYYTNEFELCRKEQEAFEKVCPLK 108

[Close]
BLAST of CsaV3_1G037430 vs. ExPASy TrEMBL
Match: A0A0A0LY30 (CHCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G538810 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 9.1e-56
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106

[Close]
BLAST of CsaV3_1G037430 vs. ExPASy TrEMBL
Match: A0A1S3BBD5 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Cucumis melo OX=3656 GN=LOC103488226 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 9.1e-56
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106

[Close]
BLAST of CsaV3_1G037430 vs. ExPASy TrEMBL
Match: A0A6J1KXR2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita maxima OX=3661 GN=LOC111499155 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.2e-51
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIA  CRSENVAYLQCK+KDPNPEKCLDKG QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTK+MDAYVGCMYY+TNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKDMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 106

[Close]
BLAST of CsaV3_1G037430 vs. ExPASy TrEMBL
Match: A0A6J1H2X4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita moschata OX=3662 GN=LOC111459990 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.2e-51
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIA  CRSENVAYLQCK+KDPNPEKCLDKG QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLDKGQQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTK+MDAYVGCMYY+TNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKDMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 106

[Close]
BLAST of CsaV3_1G037430 vs. ExPASy TrEMBL
Match: A0A6J1KIR7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita maxima OX=3661 GN=LOC111494823 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 6.8e-51
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIA  CRSENVAYLQCK+KDPNPEKCL+KG QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIANMCRSENVAYLQCKRKDPNPEKCLEKGQQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTKEMDAYVGCMYY+TNEFDLCRKEQEAFEK CPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQEAFEKACPLE 106

[Close]
BLAST of CsaV3_1G037430 vs. TAIR 10
Match: AT5G18800.1 (Cox19-like CHCH family protein )

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-46
Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           M+SAVDA G+PIPTSAVL +S+KHI ++C  ENVA+L+CK+ DPNPEKCLDKG  VTRCV
Sbjct: 1   MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           L LLKDLHQ+C KEMD YVGCMYY+TNEFDLCRKEQEAFEK CPL+
Sbjct: 61  LGLLKDLHQKCQKEMDDYVGCMYYYTNEFDLCRKEQEAFEKVCPLK 106

[Close]
BLAST of CsaV3_1G037430 vs. TAIR 10
Match: AT5G18800.2 (Cox19-like CHCH family protein )

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-46
Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 0 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           M+SAVDA G+PIPTSAVL +S+KHI ++C  ENVA+L+CK+ DPNPEKCLDKG  VTRCV
Sbjct: 1   MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           L LLKDLHQ+C KEMD YVGCMYY+TNEFDLCRKEQEAFEK CPL+
Sbjct: 61  LGLLKDLHQKCQKEMDDYVGCMYYYTNEFDLCRKEQEAFEKVCPLK 106

[Close]
BLAST of CsaV3_1G037430 vs. TAIR 10
Match: AT3G06310.1 (Cox19-like CHCH family protein )

HSP 1 Score: 177.9 bits (450), Expect = 4.2e-45
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 3   SAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLS 62
           +AVD  G+PIPTSAVL +S+KHI I+C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL 
Sbjct: 5   AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63  LLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LLKDLHQRC KEMDAYVGCMYY+TNEF+LCRKEQEAFEK CPL+
Sbjct: 65  LLKDLHQRCPKEMDAYVGCMYYYTNEFELCRKEQEAFEKVCPLK 108

[Close]
BLAST of CsaV3_1G037430 vs. TAIR 10
Match: AT3G06310.3 (Cox19-like CHCH family protein )

HSP 1 Score: 177.9 bits (450), Expect = 4.2e-45
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 3   SAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLS 62
           +AVD  G+PIPTSAVL +S+KHI I+C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL 
Sbjct: 5   AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63  LLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LLKDLHQRC KEMDAYVGCMYY+TNEF+LCRKEQEAFEK CPL+
Sbjct: 65  LLKDLHQRCPKEMDAYVGCMYYYTNEFELCRKEQEAFEKVCPLK 108

[Close]
BLAST of CsaV3_1G037430 vs. TAIR 10
Match: AT3G06310.2 (Cox19-like CHCH family protein )

HSP 1 Score: 92.0 bits (227), Expect = 3.0e-19
Identity = 41/61 (67.21%), Postives = 51/61 (83.61%), Query Frame = 0 

Query: 3  SAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLS 62
          +AVD  G+PIPTSAVL +S+KHI I+C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL 
Sbjct: 5  AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63 L 64
          L
Sbjct: 65 L 65

The following BLAST results are available for this feature:
BLAST of CsaV3_1G037430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004135555.11.9e-55100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Cucumis sativus]... [more]
XP_038893587.16.7e-5396.23NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Benincasa h... [more]
XP_038906805.11.9e-5295.28NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Benincasa hispid... [more]
XP_022958837.11.1e-5093.40NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita m... [more]
XP_022930219.11.4e-5093.40NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Cucurbita m... [more]
BLAST of CsaV3_1G037430 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LGE73.1e-4577.36NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis th... [more]
Q9SQT45.9e-4475.96NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A OS=Arabidopsis th... [more]
BLAST of CsaV3_1G037430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY309.1e-56100.00CHCH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G538810 PE=3 S... [more]
A0A1S3BBD59.1e-56100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Cucumis melo O... [more]
A0A6J1KXR25.2e-5193.40NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita... [more]
A0A6J1H2X45.2e-5193.40NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita... [more]
A0A6J1KIR76.8e-5193.40NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like OS=Cucurbita... [more]
BLAST of CsaV3_1G037430 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G18800.12.2e-4677.36Cox19-like CHCH family protein [more]
AT5G18800.22.2e-4677.36Cox19-like CHCH family protein [more]
AT3G06310.14.2e-4575.96Cox19-like CHCH family protein [more]
AT3G06310.34.2e-4575.96Cox19-like CHCH family protein [more]
AT3G06310.23.0e-1967.21Cox19-like CHCH family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010625CHCHPFAMPF06747CHCHcoord: 71..104
e-value: 1.7E-10
score: 40.7
IPR016680NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8PANTHERPTHR13344NADH-UBIQUINONE OXIDOREDUCTASEcoord: 1..105
NoneNo IPR availablePANTHERPTHR13344:SF2CHCH-RELATEDcoord: 1..105
NoneNo IPR availablePROSITEPS51808CHCHcoord: 68..106
score: 14.89208
NoneNo IPR availablePROSITEPS51808CHCHcoord: 26..67
score: 10.827829

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G037430.1CsaV3_1G037430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone