CsaV3_1G036390 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G036390
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein CHUP1, chloroplastic isoform X1
Location	chr1: 22315548 .. 22318805 (+)
RNA-Seq Expression	CsaV3_1G036390
Synteny	CsaV3_1G036390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAATAAATTAAATGAGCCCAAAAAATAAAGCAAACTACAACAGTTTGGCTTCTCCATTAGCCCATTTATTAAAAATTAACTAAAAAAACAAAGGAGAATGCCAAAGGAAGAAGATGAAGTATTAGCTATGGAGATCAATTGCTTGAAAAAAGAATTGGAAATTTCTCTACAAAAATCAATTTTTCTCGAAAAAGAAAATCAAGAACTCAGACAGGAACTGAATCGATTGCGATCCCAAATTCAGTCATTCAAAGCTCAAAACAATGAGAGAAAATCCATTCTCTGGAAGAAATTTCATAGCTCCATCGACATTTCCGTAGCCGGAGCTGACTCGCCGCCGCTAAGCCCTGCCACGGTGGCGGGTGATAAACGGGAGTCGACCAAATCGCCGAAACAGAGTAGTTGGGATGATGTGAAAGAGAGTCATAGAATGACGGGGGTACCGGCATCGCCACCGCCACCGCCACCGCCGCCACTTCCGACGAAACTGCTCGGAGGATCAAAGGCAGTGCGGCGTGTTCCGGAAGTGTTGGAGTTGTATCGTACACTGACGAAAAGAGATGCACAGAAGGAAAATAAAGTGGCACACGGCGGAGCTCCGGCTGTGGCGTTCACTAAAAACATGATCGGCGAAATTGAAAACCGATCTGCCTATCTCTCGGCGGTATGTATTTATAATTAACAGATTTTTATGGGGTGGTGGCGTTCAAAAACTTTAAAAATAAAATTTAAAATGTTACTAAATTGAATTTTATATTCGACAGAGTTCTAAACCTTTTAATTTACTCTGTTAATAGAAATGAAATTTTATAACCTTTCCAGGTTGAACTCAAATTTAAATATTTTATAAGTTTACACTTCAAATTTAAGAGTTTTTCGATTTTTCTTATAGTATGTGTGGATAGAAGAATTAAATTATAATATCCAAATTGATATTACATAACATCCATTAAGCTAGGTTTATCTTAATTCAAATTCACTCGAGTTAGAGACTTTAGAATTTTTCTCTAAGGTAATCACTTTTTTCTTTTAAATTACGTGTTTGTTCGATTATACTACAAATAATTAAAATTTTGTTGAATATATAAAATTGAGAGGAAAGCTAATTAAATTAAATTAAAAAGTTCAAAAACCTCTCTTAGTTTGATGGTACTAGATTTAAAATCATCGAGGCAAAAAAGAAAAACTATGGTTTCACAGACATAAACTTGAATCTATGAAACTTAGGTAGAAGTCATACAAGGTAATGAAAGTTAGTCTCTTTGATTAGTTACTCCCATGTTAGTAACTCTAAAAAAACCTTCGAATTAGAAGACTCAGTTGAAATATTTTCATTTAAAATTTTAAAAGATAAAAAATCAAAGGTTGGATTGTCTAAAAAACTAGAGATGGAACACATGGCAGATAAAATCCGAGGTAGAAACACATGGAGATTTTGTGAATTGGTTGATCAAAGAAGTAGAAACGATAGCACCAAGAGACATATCAGAGGTGGAAAGGTTCGTGAAGTGGCTTGATGGGAAGTTGGCATCATTGGTGGACGAGAGAGCAGTGCTAAAGTACTTCCCACGGTGGCCAGAGGCAAAAGCAGATGCACTACGGGAGGCAGCATTCAGCTACCGAGACCTGAAGGGCTTAGAGAGCAAAGTGTGTATGTTTAGAGACAATCCAAAGGAAGAGATGAATGTTGTGTTGAAGAGAGCTCAAGCATTGCAAGACAGGCGAGAATGTACAATCAATTTGTTGTTTGTTGTGCAATGTTTCTGTTTTGGTAAGTTGATTTGAATGATGAACTTATGAGAATTTTGTTGTTTTAAAATGTGCAGGGTGGAGCAGAGTGTGAGTAATATGGAGAGGACGAGGGAGTTCAATTGTAGGAAGTATCAAGCTTTTCAAATTCCCTGCCAATGGATGTTCGATTCCGCTTTGCCTACTCAGGTATCCAACATTAACACATTATATAACACTAATTATCATTTCATTGGATCGAAATCGATTTTCTAACATCTTACAATCTATGCTTGCAGTACTAAACGTAAATTCTATGAGATGTACAAGTCAAATCTATATATAATTAATCAATTAATTTAAAATTTTGAACCTACAAAGCTCAGCAATCTAGACATCAAGTTAAGGGGAAAACGAATTTCAGGGTTATAATCTTAAAACAGATTCGGCGAAACATTTTACAAAACTTTTTTAAGATTAAGAAACACAAATGAAATTGAAATCAATTTTCAATCGACTGTGTCTCAGGACAAGAACCAGGTTGATAGTGAGTTTTAACCACAAAAACTAGTTGAATTTTCTTGGATTATAATCTAATAGTCAAGTTTCAGAATCACATTAAAATAACTAATAATAATATGCTTAGACAAAAATAACTACAAACTATACGTGAACATTCATTGCACACACCAAAAGGAAAACCAAAACATCTTGAATCATCAAGAAAATGAGAAGAATAAAAAGCCCTAACTCAGTCTCTTGGATTGCAGATAAAGATGAGCACATTGAGGCTGGCGAAGGAATACATGATAAGGATAACAAGAGAACTACAATCAACCGAGACCCCACAAAGAGAAAACCTTTTCCTCCAAGGGGCTCGATTTGCGTACAGGGTTCATCAGGTAAACCAGAACGATTCACTAATACAAACACATTGCTTTGACAATGACTAACCAATCATAATCCTTTTTAGTATGCAGGTGGTTTCGATTCAGAGACTATAGAGGCTTTTGAAGGACTGAAGAAAGCTGGGCTGAGTAGTCAAAGAAAATAGGCTCGAACGTAAATTATAGGGAATGAATATTGTCGTCTGTTGCCAACTCAAATGCAGAGTACATTCAACTAGATGATGTAACACAACTGCTTGAACGGAATTTTATATATATAATCAAATCCTATTGCATCTTGTACAACCCATAGCAAGAAAATGGCATATCAGCATAACTTGACTTTGTTCTATTAAAATTTAGTAATTAACTAGATATAACACCAGGAGGAACGTCCTAAGAATATATGAAGGGCGAAGCTTTCAATAAAACAATGTTTCTTGATTGGACGACGTTAGAGAACTTATCCCAACAGTCTAAAACCCCATATTCCACCACTAAGATTTCTAATTGGGCAAGGTTTCCTTTCTCAAAAAAGAAGCAAAACTAGAAAGAGTCAACTCGATGTTCCAACAAAATCACAAAAGAAAATAGAACACTCATGAACAAGAACAGTGTTATAATCAAAATGCAGAGCAATGC

mRNA sequence

ATGCCAAAGGAAGAAGATGAAGTATTAGCTATGGAGATCAATTGCTTGAAAAAAGAATTGGAAATTTCTCTACAAAAATCAATTTTTCTCGAAAAAGAAAATCAAGAACTCAGACAGGAACTGAATCGATTGCGATCCCAAATTCAGTCATTCAAAGCTCAAAACAATGAGAGAAAATCCATTCTCTGGAAGAAATTTCATAGCTCCATCGACATTTCCGTAGCCGGAGCTGACTCGCCGCCGCTAAGCCCTGCCACGGTGGCGGGTGATAAACGGGAGTCGACCAAATCGCCGAAACAGAGTAGTTGGGATGATGTGAAAGAGAGTCATAGAATGACGGGGGTACCGGCATCGCCACCGCCACCGCCACCGCCGCCACTTCCGACGAAACTGCTCGGAGGATCAAAGGCAGTGCGGCGTGTTCCGGAAGTGTTGGAGTTGTATCGTACACTGACGAAAAGAGATGCACAGAAGGAAAATAAAGTGGCACACGGCGGAGCTCCGGCTGTGGCGTTCACTAAAAACATGATCGGCGAAATTGAAAACCGATCTGCCTATCTCTCGGCGATAAAATCCGAGGTAGAAACACATGGAGATTTTGTGAATTGGTTGATCAAAGAAGTAGAAACGATAGCACCAAGAGACATATCAGAGGTGGAAAGGTTCGTGAAGTGGCTTGATGGGAAGTTGGCATCATTGGTGGACGAGAGAGCAGTGCTAAAGTACTTCCCACGGTGGCCAGAGGCAAAAGCAGATGCACTACGGGAGGCAGCATTCAGCTACCGAGACCTGAAGGGCTTAGAGAGCAAAGTGTGTATGTTTAGAGACAATCCAAAGGAAGAGATGAATGTTGTGTTGAAGAGAGCTCAAGCATTGCAAGACAGGGTGGAGCAGAGTGTGAGTAATATGGAGAGGACGAGGGAGTTCAATTGTAGGAAGTATCAAGCTTTTCAAATTCCCTGCCAATGGATGTTCGATTCCGCTTTGCCTACTCAGATAAAGATGAGCACATTGAGGCTGGCGAAGGAATACATGATAAGGATAACAAGAGAACTACAATCAACCGAGACCCCACAAAGAGAAAACCTTTTCCTCCAAGGGGCTCGATTTGCGTACAGGGTTCATCAGTATGCAGGTGGTTTCGATTCAGAGACTATAGAGGCTTTTGAAGGACTGAAGAAAGCTGGGCTGAGTAGTCAAAGAAAATAG

Coding sequence (CDS)

ATGCCAAAGGAAGAAGATGAAGTATTAGCTATGGAGATCAATTGCTTGAAAAAAGAATTGGAAATTTCTCTACAAAAATCAATTTTTCTCGAAAAAGAAAATCAAGAACTCAGACAGGAACTGAATCGATTGCGATCCCAAATTCAGTCATTCAAAGCTCAAAACAATGAGAGAAAATCCATTCTCTGGAAGAAATTTCATAGCTCCATCGACATTTCCGTAGCCGGAGCTGACTCGCCGCCGCTAAGCCCTGCCACGGTGGCGGGTGATAAACGGGAGTCGACCAAATCGCCGAAACAGAGTAGTTGGGATGATGTGAAAGAGAGTCATAGAATGACGGGGGTACCGGCATCGCCACCGCCACCGCCACCGCCGCCACTTCCGACGAAACTGCTCGGAGGATCAAAGGCAGTGCGGCGTGTTCCGGAAGTGTTGGAGTTGTATCGTACACTGACGAAAAGAGATGCACAGAAGGAAAATAAAGTGGCACACGGCGGAGCTCCGGCTGTGGCGTTCACTAAAAACATGATCGGCGAAATTGAAAACCGATCTGCCTATCTCTCGGCGATAAAATCCGAGGTAGAAACACATGGAGATTTTGTGAATTGGTTGATCAAAGAAGTAGAAACGATAGCACCAAGAGACATATCAGAGGTGGAAAGGTTCGTGAAGTGGCTTGATGGGAAGTTGGCATCATTGGTGGACGAGAGAGCAGTGCTAAAGTACTTCCCACGGTGGCCAGAGGCAAAAGCAGATGCACTACGGGAGGCAGCATTCAGCTACCGAGACCTGAAGGGCTTAGAGAGCAAAGTGTGTATGTTTAGAGACAATCCAAAGGAAGAGATGAATGTTGTGTTGAAGAGAGCTCAAGCATTGCAAGACAGGGTGGAGCAGAGTGTGAGTAATATGGAGAGGACGAGGGAGTTCAATTGTAGGAAGTATCAAGCTTTTCAAATTCCCTGCCAATGGATGTTCGATTCCGCTTTGCCTACTCAGATAAAGATGAGCACATTGAGGCTGGCGAAGGAATACATGATAAGGATAACAAGAGAACTACAATCAACCGAGACCCCACAAAGAGAAAACCTTTTCCTCCAAGGGGCTCGATTTGCGTACAGGGTTCATCAGTATGCAGGTGGTTTCGATTCAGAGACTATAGAGGCTTTTGAAGGACTGAAGAAAGCTGGGCTGAGTAGTCAAAGAAAATAG

Protein sequence

MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKSILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPPPPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEIENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVLKYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSVSNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQRENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK*

Homology

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BLAST of CsaV3_1G036390 vs. NCBI nr
Match: XP_011658693.1 (protein CHUP1, chloroplastic isoform X1 [Cucumis sativus] >KGN65828.1 hypothetical protein Csa_023225 [Cucumis sativus])

HSP 1 Score: 780.8 bits (2015), Expect = 5.7e-222
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0


Query: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60
           MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS
Sbjct: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60

Query: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120
           ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP
Sbjct: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180
           PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240

Query: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300
           KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV
Sbjct: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300

Query: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360
           SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR
Sbjct: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360

Query: 361 ENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK 403
           ENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK
Sbjct: 361 ENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK 402

[Close]

BLAST of CsaV3_1G036390 vs. NCBI nr
Match: XP_011658695.1 (protein CHUP1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 730.3 bits (1884), Expect = 8.9e-207
Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0


Query: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60
           MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS
Sbjct: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60

Query: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120
           ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP
Sbjct: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180
           PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240

Query: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300
           KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV
Sbjct: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300

Query: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360
           SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR
Sbjct: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360

Query: 361 ENLFLQGARFAYRVHQ 377
           ENLFLQGARFAYRVHQ
Sbjct: 361 ENLFLQGARFAYRVHQ 376

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BLAST of CsaV3_1G036390 vs. NCBI nr
Match: XP_008457349.1 (PREDICTED: protein CHUP1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 712.6 bits (1838), Expect = 1.9e-201
Identity = 366/402 (91.04%), Postives = 382/402 (95.02%), Query Frame = 0


Query: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60
           MPKE+DE LAMEI+CLKK+LEISLQKSIFLE+ENQELR ELNRL+SQIQS KA NNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120
           ILWKKFHSS+D++VAGADSPPL+PAT AGDKRE TK PKQSSWDDVKES RMT VPAS P
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYRTLTKRDAQKENKVAHGGAP VAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE IAPRDISE E+FVKWLD KLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300
           K+FPRWPEAKADALREAAFSYRDLK LESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300

Query: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360
           SNMERTREFNC+KYQAFQIPCQWMFDSALPTQIK+STLRLAKEYMIRITREL+STET Q 
Sbjct: 301 SNMERTREFNCKKYQAFQIPCQWMFDSALPTQIKLSTLRLAKEYMIRITRELRSTETSQA 360

Query: 361 ENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK 403
           ENLFLQG RFAYRVHQYAGGFDSE IEAFEGLKKAGLSSQRK
Sbjct: 361 ENLFLQGVRFAYRVHQYAGGFDSEAIEAFEGLKKAGLSSQRK 402

[Close]

BLAST of CsaV3_1G036390 vs. NCBI nr
Match: XP_008457350.1 (PREDICTED: protein CHUP1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 664.1 bits (1712), Expect = 7.8e-187
Identity = 341/376 (90.69%), Postives = 357/376 (94.95%), Query Frame = 0


Query: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60
           MPKE+DE LAMEI+CLKK+LEISLQKSIFLE+ENQELR ELNRL+SQIQS KA NNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120
           ILWKKFHSS+D++VAGADSPPL+PAT AGDKRE TK PKQSSWDDVKES RMT VPAS P
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYRTLTKRDAQKENKVAHGGAP VAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE IAPRDISE E+FVKWLD KLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300
           K+FPRWPEAKADALREAAFSYRDLK LESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300

Query: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360
           SNMERTREFNC+KYQAFQIPCQWMFDSALPTQIK+STLRLAKEYMIRITREL+STET Q 
Sbjct: 301 SNMERTREFNCKKYQAFQIPCQWMFDSALPTQIKLSTLRLAKEYMIRITRELRSTETSQA 360

Query: 361 ENLFLQGARFAYRVHQ 377
           ENLFLQG RFAYRVHQ
Sbjct: 361 ENLFLQGVRFAYRVHQ 376

[Close]

BLAST of CsaV3_1G036390 vs. NCBI nr
Match: XP_038896069.1 (protein CHUP1, chloroplastic [Benincasa hispida])

HSP 1 Score: 641.7 bits (1654), Expect = 4.1e-180
Identity = 335/402 (83.33%), Postives = 358/402 (89.05%), Query Frame = 0


Query: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60
           MPKEEDE LAMEIN LKKELEISLQKS FLE ENQELRQEL RL+SQIQS KA NNERKS
Sbjct: 1   MPKEEDEELAMEINYLKKELEISLQKSNFLENENQELRQELGRLKSQIQSLKAHNNERKS 60

Query: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120
           ILWKKFHSS+D++VAGADS P SPA  AG+KRE+TKS KQSSW DVKE+ RM   PA   
Sbjct: 61  ILWKKFHSSMDVAVAGADSRPPSPAAAAGEKRETTKSQKQSSWGDVKENQRMMVAPAL-A 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180
           PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENK  HGG P VAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKATHGGVPTVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE  APRDISEVERFVKW+D KL SLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEAAAPRDISEVERFVKWVDVKLGSLVDERAVL 240

Query: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300
           K+FPRWPEAKADALREAAFSYRDLK LE++VCMFRDN KEE+NVVLKRAQALQDRVEQSV
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKRLENEVCMFRDNAKEEVNVVLKRAQALQDRVEQSV 300

Query: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360
           SN+E+TREFN +KYQ FQIP QWMFDSALP Q+K+S+LRL KE M+RITRE++S ETPQ 
Sbjct: 301 SNLEKTREFNSKKYQRFQIPSQWMFDSALPAQMKLSSLRLGKECMLRITREIRSIETPQA 360

Query: 361 ENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK 403
           ENLFLQG RFAYRVHQ+AGGFDSE    FE LKKAGLSSQRK
Sbjct: 361 ENLFLQGVRFAYRVHQFAGGFDSEATVVFEELKKAGLSSQRK 401

[Close]

BLAST of CsaV3_1G036390 vs. ExPASy Swiss-Prot
Match: Q9LI74 (Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.7e-65
Identity = 143/293 (48.81%), Postives = 192/293 (65.53%), Query Frame = 0


Query: 114 GVPASPP---PPPPPPLPTKL---LGGSKAVRRVPEVLELYRTLTKRDAQKE---NKVAH 173
           G P  PP   PPPPPP P  L    GG   V R PE++E Y++L KR+++KE   + ++ 
Sbjct: 688 GGPPPPPGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISS 747

Query: 174 GGAPAVAFTKNMIGEIENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVK 233
           G   + A   NMIGEIENRS +L A+K++VET GDFV  L  EV   +  DI ++  FV 
Sbjct: 748 GTGNSSAARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVS 807

Query: 234 WLDGKLASLVDERAVLKYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNV 293
           WLD +L+ LVDERAVLK+F  WPE KADALREAAF Y+DL  LE +V  F D+P      
Sbjct: 808 WLDEELSFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEP 867

Query: 294 VLKRAQALQDRVEQSVSNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEY 353
            LK+   L ++VEQSV  + RTR+    +Y+ F IP  W+ D+ +  +IK+S+++LAK+Y
Sbjct: 868 ALKKMYKLLEKVEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQLAKKY 927

Query: 354 MIRITRELQST----ETPQRENLFLQGARFAYRVHQYAGGFDSETIEAFEGLK 394
           M R+  EL S     + P RE L LQG RFA+RVHQ+AGGFD+E+++AFE L+
Sbjct: 928 MKRVAYELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 979

[Close]

BLAST of CsaV3_1G036390 vs. ExPASy TrEMBL
Match: A0A0A0LVK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532360 PE=4 SV=1)

HSP 1 Score: 780.8 bits (2015), Expect = 2.8e-222
Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0


Query: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60
           MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS
Sbjct: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60

Query: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120
           ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP
Sbjct: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180
           PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI
Sbjct: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240

Query: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300
           KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV
Sbjct: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300

Query: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360
           SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR
Sbjct: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360

Query: 361 ENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK 403
           ENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK
Sbjct: 361 ENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK 402

[Close]

BLAST of CsaV3_1G036390 vs. ExPASy TrEMBL
Match: A0A1S3C4V9 (protein CHUP1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497059 PE=4 SV=1)

HSP 1 Score: 712.6 bits (1838), Expect = 9.3e-202
Identity = 366/402 (91.04%), Postives = 382/402 (95.02%), Query Frame = 0


Query: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60
           MPKE+DE LAMEI+CLKK+LEISLQKSIFLE+ENQELR ELNRL+SQIQS KA NNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120
           ILWKKFHSS+D++VAGADSPPL+PAT AGDKRE TK PKQSSWDDVKES RMT VPAS P
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYRTLTKRDAQKENKVAHGGAP VAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE IAPRDISE E+FVKWLD KLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300
           K+FPRWPEAKADALREAAFSYRDLK LESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300

Query: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360
           SNMERTREFNC+KYQAFQIPCQWMFDSALPTQIK+STLRLAKEYMIRITREL+STET Q 
Sbjct: 301 SNMERTREFNCKKYQAFQIPCQWMFDSALPTQIKLSTLRLAKEYMIRITRELRSTETSQA 360

Query: 361 ENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK 403
           ENLFLQG RFAYRVHQYAGGFDSE IEAFEGLKKAGLSSQRK
Sbjct: 361 ENLFLQGVRFAYRVHQYAGGFDSEAIEAFEGLKKAGLSSQRK 402

[Close]

BLAST of CsaV3_1G036390 vs. ExPASy TrEMBL
Match: A0A1S3C5E9 (protein CHUP1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497059 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 3.8e-187
Identity = 341/376 (90.69%), Postives = 357/376 (94.95%), Query Frame = 0


Query: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60
           MPKE+DE LAMEI+CLKK+LEISLQKSIFLE+ENQELR ELNRL+SQIQS KA NNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120
           ILWKKFHSS+D++VAGADSPPL+PAT AGDKRE TK PKQSSWDDVKES RMT VPAS P
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYRTLTKRDAQKENKVAHGGAP VAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE IAPRDISE E+FVKWLD KLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300
           K+FPRWPEAKADALREAAFSYRDLK LESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300

Query: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360
           SNMERTREFNC+KYQAFQIPCQWMFDSALPTQIK+STLRLAKEYMIRITREL+STET Q 
Sbjct: 301 SNMERTREFNCKKYQAFQIPCQWMFDSALPTQIKLSTLRLAKEYMIRITRELRSTETSQA 360

Query: 361 ENLFLQGARFAYRVHQ 377
           ENLFLQG RFAYRVHQ
Sbjct: 361 ENLFLQGVRFAYRVHQ 376

[Close]

BLAST of CsaV3_1G036390 vs. ExPASy TrEMBL
Match: A0A5D3BE56 (Protein CHUP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00800 PE=4 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 2.5e-175
Identity = 336/419 (80.19%), Postives = 357/419 (85.20%), Query Frame = 0


Query: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60
           MPKE+DE LAMEI+CLKK+LEISLQKSIFLE+ENQELR ELNRL+SQIQS KA NNERKS
Sbjct: 1   MPKEKDEELAMEIDCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120
           ILWKKFHSS+D++VAGADSPPL+PAT AGDKRE TK PKQSSWDDVKES RMT VPAS P
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATAAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYRTLTKRDAQKENKVAHGGAP VAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE IAPRDISE E+FVKWLD KLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISEAEKFVKWLDVKLASLVDERAVL 240

Query: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300
           K+FPRWPEAKADALREAAFSYRDLK LESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300

Query: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQI----------KMSTLRLAK------EY 360
           SNMERTREFNC+KYQAFQIPCQWMFDSALPTQ           K+  +   K        
Sbjct: 301 SNMERTREFNCKKYQAFQIPCQWMFDSALPTQTVPQDNNQVDNKVEHIEAGKGIHDKDNK 360

Query: 361 MIRITRELQSTET-PQRENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQRK 403
              I R L S +  P R +L +QG+         +GGFDSE IEAFEGLKKAGLSSQRK
Sbjct: 361 RTTINRNLTSRKPFPPRGSLCIQGS---------SGGFDSEAIEAFEGLKKAGLSSQRK 410

[Close]

BLAST of CsaV3_1G036390 vs. ExPASy TrEMBL
Match: A0A5A7V2M1 (Protein CHUP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00750 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 9.6e-175
Identity = 338/421 (80.29%), Postives = 359/421 (85.27%), Query Frame = 0


Query: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60
           MPKE+DE LAMEINCLKK+LEISLQKSIFLE+ENQELR ELNRL+SQIQS KA NNERKS
Sbjct: 1   MPKEKDEELAMEINCLKKDLEISLQKSIFLERENQELRLELNRLKSQIQSLKALNNERKS 60

Query: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120
           ILWKKFHSS+D++VAGADSPPL+PATVAGDKRE TK PKQSSWDDVKES RMT VPAS P
Sbjct: 61  ILWKKFHSSMDMAVAGADSPPLNPATVAGDKREVTKFPKQSSWDDVKESQRMTAVPASAP 120

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180
           PPPPPPLP KLLGGSKAVRRVPEVL+LYRTLTKRDAQKENKVAHGGAP VAFTKNMIGEI
Sbjct: 121 PPPPPPLPKKLLGGSKAVRRVPEVLDLYRTLTKRDAQKENKVAHGGAPVVAFTKNMIGEI 180

Query: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240
           ENRSAYLSAIKSEVETHG+FVNWLIKEVE IAPRDIS+VE+FVKWLD KLASLVDERAVL
Sbjct: 181 ENRSAYLSAIKSEVETHGEFVNWLIKEVEMIAPRDISDVEKFVKWLDVKLASLVDERAVL 240

Query: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDR----- 300
           K+FPRWPEAKADALREAAFSYRDLK LESKVCMFRDNPKEEMNVVLKRAQALQDR     
Sbjct: 241 KHFPRWPEAKADALREAAFSYRDLKSLESKVCMFRDNPKEEMNVVLKRAQALQDRRECTI 300

Query: 301 --VEQSVSNMERTREFNCRKYQAFQIPCQWMFDSALPTQ-----IKMSTLRLAK------ 360
             VEQSVSNMERTREFNC+KYQAFQIPCQWMFDSALPTQ      K+  +   K      
Sbjct: 301 NSVEQSVSNMERTREFNCKKYQAFQIPCQWMFDSALPTQNSHTKHKVEHIEAGKGIHDKD 360

Query: 361 EYMIRITRELQSTET-PQRENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKKAGLSSQR 403
                I R L S +  P R +L +QG+         +GGFDSE IEAFEGLKKAGLSSQR
Sbjct: 361 NKRTTINRNLTSRKPFPPRGSLCIQGS---------SGGFDSEAIEAFEGLKKAGLSSQR 412

[Close]

BLAST of CsaV3_1G036390 vs. TAIR 10
Match: AT1G07120.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: inflorescence meristem, petal, leaf whorl, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G18570.1); Has 288 Blast hits to 260 proteins in 50 species: Archae - 0; Bacteria - 8; Metazoa - 27; Fungi - 15; Plants - 163; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). )

HSP 1 Score: 348.2 bits (892), Expect = 8.8e-96
Identity = 190/394 (48.22%), Postives = 261/394 (66.24%), Query Frame = 0


Query: 1   MPKEEDEVLAMEINCLKKELEISLQKSIFLEKENQELRQELNRLRSQIQSFKAQNNERKS 60
           +P  ED+    ++  L KEL+  L ++  LEKEN ELRQE+ RLR+Q+ + K+  NERKS
Sbjct: 2   LPNGEDD---SDLLRLVKELQAYLVRNDKLEKENHELRQEVARLRAQVSNLKSHENERKS 61

Query: 61  ILWKKFHSSIDISVAGADSPPLSPATVAGDKRESTKSPKQSSWDDVKESHRMTGVPASPP 120
           +LWKK  SS D S     +     +  +  K +  ++P             + G   +  
Sbjct: 62  MLWKKLQSSYDGSNTDGSNLKAPESVKSNTKGQEVRNPNPKP--------TIQGQSTATK 121

Query: 121 PPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKRDAQKENKVAHGGAPAVAFTKNMIGEI 180
           PPPPPPLP+K   G ++VRR PEV+E YR LTKR++   NK+   G  + AF +NMIGEI
Sbjct: 122 PPPPPPLPSKRTLGKRSVRRAPEVVEFYRALTKRESHMGNKINQNGVLSPAFNRNMIGEI 181

Query: 181 ENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVKWLDGKLASLVDERAVL 240
           ENRS YLS IKS+ + H D ++ LI +VE     DISEVE FVKW+D +L+SLVDERAVL
Sbjct: 182 ENRSKYLSDIKSDTDRHRDHIHILISKVEAATFTDISEVETFVKWIDEELSSLVDERAVL 241

Query: 241 KYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSV 300
           K+FP+WPE K D+LREAA +Y+  K L +++  F+DNPK+ +   L+R Q+LQDR+E+SV
Sbjct: 242 KHFPKWPERKVDSLREAACNYKRPKNLGNEILSFKDNPKDSLTQALQRIQSLQDRLEESV 301

Query: 301 SNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEYMIRITRELQSTETPQR 360
           +N E+ R+   ++Y+ FQIP +WM D+ L  Q+K S+LRLA+EYM RI +EL+S  + + 
Sbjct: 302 NNTEKMRDSTGKRYKDFQIPWEWMLDTGLIGQLKYSSLRLAQEYMKRIAKELESNGSGKE 361

Query: 361 ENLFLQGARFAYRVHQYAGGFDSETIEAFEGLKK 395
            NL LQG RFAY +HQ+AGGFD ET+  F  LKK
Sbjct: 362 GNLMLQGVRFAYTIHQFAGGFDGETLSIFHELKK 384

[Close]

BLAST of CsaV3_1G036390 vs. TAIR 10
Match: AT4G18570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 271.9 bits (694), Expect = 8.0e-73
Identity = 160/368 (43.48%), Postives = 228/368 (61.96%), Query Frame = 0


Query: 45  RSQIQSFKAQNNERKSILWKKFHSSIDISVAGADSPPLSPATVAGDKRES-TKSPKQSSW 104
           + +I+S+   +N  + +      S++   V     PP   +   GD  E+    P Q S 
Sbjct: 251 KDEIESYSRSSNS-EELTESSSLSTVRSRVPRVPKPPPKRSISLGDSTENRADPPPQKSI 310

Query: 105 DD---------VKESHRMTGVPASPPPPPPPPLPTKLLGGSKAVRRVPEVLELYRTLTKR 164
                      +++      V  +PPPPPPPP P  L   S  VRRVPEV+E Y +L +R
Sbjct: 311 PPPPPPPPPPLLQQPPPPPSVSKAPPPPPPPPPPKSLSIASAKVRRVPEVVEFYHSLMRR 370

Query: 165 DAQKENKVAHGGAPAVA-------FTKNMIGEIENRSAYLSAIKSEVETHGDFVNWLIKE 224
           D+    + + GG  A A         ++MIGEIENRS YL AIK++VET GDF+ +LIKE
Sbjct: 371 DSTNSRRDSTGGGNAAAEAILANSNARDMIGEIENRSVYLLAIKTDVETQGDFIRFLIKE 430

Query: 225 VETIAPRDISEVERFVKWLDGKLASLVDERAVLKYFPRWPEAKADALREAAFSYRDLKGL 284
           V   A  DI +V  FVKWLD +L+ LVDERAVLK+F  WPE KADALREAAF Y DLK L
Sbjct: 431 VGNAAFSDIEDVVPFVKWLDDELSYLVDERAVLKHF-EWPEQKADALREAAFCYFDLKKL 490

Query: 285 ESKVCMFRDNPKEEMNVVLKRAQALQDRVEQSVSNMERTREFNCRKYQAFQIPCQWMFDS 344
            S+   FR++P++  +  LK+ QAL +++E  V ++ R RE    K+++FQIP  WM ++
Sbjct: 491 ISEASRFREDPRQSSSSALKKMQALFEKLEHGVYSLSRMRESAATKFKSFQIPVDWMLET 550

Query: 345 ALPTQIKMSTLRLAKEYMIRITRELQSTE--TPQRENLFLQGARFAYRVHQYAGGFDSET 394
            + +QIK+++++LA +YM R++ EL++ E   P+ E L +QG RFA+RVHQ+AGGFD+ET
Sbjct: 551 GITSQIKLASVKLAMKYMKRVSAELEAIEGGGPEEEELIVQGVRFAFRVHQFAGGFDAET 610

[Close]

BLAST of CsaV3_1G036390 vs. TAIR 10
Match: AT3G25690.1 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 250.8 bits (639), Expect = 1.9e-66
Identity = 143/293 (48.81%), Postives = 192/293 (65.53%), Query Frame = 0


Query: 114 GVPASPP---PPPPPPLPTKL---LGGSKAVRRVPEVLELYRTLTKRDAQKE---NKVAH 173
           G P  PP   PPPPPP P  L    GG   V R PE++E Y++L KR+++KE   + ++ 
Sbjct: 688 GGPPPPPGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISS 747

Query: 174 GGAPAVAFTKNMIGEIENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVK 233
           G   + A   NMIGEIENRS +L A+K++VET GDFV  L  EV   +  DI ++  FV 
Sbjct: 748 GTGNSSAARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVS 807

Query: 234 WLDGKLASLVDERAVLKYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNV 293
           WLD +L+ LVDERAVLK+F  WPE KADALREAAF Y+DL  LE +V  F D+P      
Sbjct: 808 WLDEELSFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEP 867

Query: 294 VLKRAQALQDRVEQSVSNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEY 353
            LK+   L ++VEQSV  + RTR+    +Y+ F IP  W+ D+ +  +IK+S+++LAK+Y
Sbjct: 868 ALKKMYKLLEKVEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQLAKKY 927

Query: 354 MIRITRELQST----ETPQRENLFLQGARFAYRVHQYAGGFDSETIEAFEGLK 394
           M R+  EL S     + P RE L LQG RFA+RVHQ+AGGFD+E+++AFE L+
Sbjct: 928 MKRVAYELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 979

[Close]

BLAST of CsaV3_1G036390 vs. TAIR 10
Match: AT3G25690.2 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 250.8 bits (639), Expect = 1.9e-66
Identity = 143/293 (48.81%), Postives = 192/293 (65.53%), Query Frame = 0


Query: 114 GVPASPP---PPPPPPLPTKL---LGGSKAVRRVPEVLELYRTLTKRDAQKE---NKVAH 173
           G P  PP   PPPPPP P  L    GG   V R PE++E Y++L KR+++KE   + ++ 
Sbjct: 688 GGPPPPPGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISS 747

Query: 174 GGAPAVAFTKNMIGEIENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVK 233
           G   + A   NMIGEIENRS +L A+K++VET GDFV  L  EV   +  DI ++  FV 
Sbjct: 748 GTGNSSAARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVS 807

Query: 234 WLDGKLASLVDERAVLKYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNV 293
           WLD +L+ LVDERAVLK+F  WPE KADALREAAF Y+DL  LE +V  F D+P      
Sbjct: 808 WLDEELSFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEP 867

Query: 294 VLKRAQALQDRVEQSVSNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEY 353
            LK+   L ++VEQSV  + RTR+    +Y+ F IP  W+ D+ +  +IK+S+++LAK+Y
Sbjct: 868 ALKKMYKLLEKVEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQLAKKY 927

Query: 354 MIRITRELQST----ETPQRENLFLQGARFAYRVHQYAGGFDSETIEAFEGLK 394
           M R+  EL S     + P RE L LQG RFA+RVHQ+AGGFD+E+++AFE L+
Sbjct: 928 MKRVAYELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 979

[Close]

BLAST of CsaV3_1G036390 vs. TAIR 10
Match: AT3G25690.3 (Hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 250.8 bits (639), Expect = 1.9e-66
Identity = 143/293 (48.81%), Postives = 192/293 (65.53%), Query Frame = 0


Query: 114 GVPASPP---PPPPPPLPTKL---LGGSKAVRRVPEVLELYRTLTKRDAQKE---NKVAH 173
           G P  PP   PPPPPP P  L    GG   V R PE++E Y++L KR+++KE   + ++ 
Sbjct: 547 GGPPPPPGGGPPPPPPPPGALGRGAGGGNKVHRAPELVEFYQSLMKRESKKEGAPSLISS 606

Query: 174 GGAPAVAFTKNMIGEIENRSAYLSAIKSEVETHGDFVNWLIKEVETIAPRDISEVERFVK 233
           G   + A   NMIGEIENRS +L A+K++VET GDFV  L  EV   +  DI ++  FV 
Sbjct: 607 GTGNSSAARNNMIGEIENRSTFLLAVKADVETQGDFVQSLATEVRASSFTDIEDLLAFVS 666

Query: 234 WLDGKLASLVDERAVLKYFPRWPEAKADALREAAFSYRDLKGLESKVCMFRDNPKEEMNV 293
           WLD +L+ LVDERAVLK+F  WPE KADALREAAF Y+DL  LE +V  F D+P      
Sbjct: 667 WLDEELSFLVDERAVLKHFD-WPEGKADALREAAFEYQDLMKLEKQVTSFVDDPNLSCEP 726

Query: 294 VLKRAQALQDRVEQSVSNMERTREFNCRKYQAFQIPCQWMFDSALPTQIKMSTLRLAKEY 353
            LK+   L ++VEQSV  + RTR+    +Y+ F IP  W+ D+ +  +IK+S+++LAK+Y
Sbjct: 727 ALKKMYKLLEKVEQSVYALLRTRDMAISRYKEFGIPVDWLSDTGVVGKIKLSSVQLAKKY 786

Query: 354 MIRITRELQST----ETPQRENLFLQGARFAYRVHQYAGGFDSETIEAFEGLK 394
           M R+  EL S     + P RE L LQG RFA+RVHQ+AGGFD+E+++AFE L+
Sbjct: 787 MKRVAYELDSVSGSDKDPNREFLLLQGVRFAFRVHQFAGGFDAESMKAFEELR 838

The following BLAST results are available for this feature:

BLAST of CsaV3_1G036390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658693.1	5.7e-222	100.00	protein CHUP1, chloroplastic isoform X1 [Cucumis sativus] >KGN65828.1 hypothetic...	[more]
XP_011658695.1	8.9e-207	100.00	protein CHUP1, chloroplastic isoform X2 [Cucumis sativus]	[more]
XP_008457349.1	1.9e-201	91.04	PREDICTED: protein CHUP1, chloroplastic isoform X1 [Cucumis melo]	[more]
XP_008457350.1	7.8e-187	90.69	PREDICTED: protein CHUP1, chloroplastic isoform X2 [Cucumis melo]	[more]
XP_038896069.1	4.1e-180	83.33	protein CHUP1, chloroplastic [Benincasa hispida]	[more]

BLAST of CsaV3_1G036390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LI74	2.7e-65	48.81	Protein CHUP1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CHUP1 PE=1 SV=1	[more]

BLAST of CsaV3_1G036390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVK7	2.8e-222	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G532360 PE=4 SV=1	[more]
A0A1S3C4V9	9.3e-202	91.04	protein CHUP1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497059 ...	[more]
A0A1S3C5E9	3.8e-187	90.69	protein CHUP1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497059 ...	[more]
A0A5D3BE56	2.5e-175	80.19	Protein CHUP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00800 ...	[more]
A0A5A7V2M1	9.6e-175	80.29	Protein CHUP1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00750 ...	[more]

BLAST of CsaV3_1G036390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07120.1	8.8e-96	48.22	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT4G18570.1	8.0e-73	43.48	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G25690.1	1.9e-66	48.81	Hydroxyproline-rich glycoprotein family protein	[more]
AT3G25690.2	1.9e-66	48.81	Hydroxyproline-rich glycoprotein family protein	[more]
AT3G25690.3	1.9e-66	48.81	Hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 20..54
None	No IPR available	COILS	Coil	Coil	coord: 286..306
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..128
None	No IPR available	PANTHER	PTHR31342:SF48	CHUP1-LIKE PROTEIN	coord: 6..396
IPR040265	Protein CHUP1-like	PANTHER	PTHR31342	PROTEIN CHUP1, CHLOROPLASTIC	coord: 6..396

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G036390.1	CsaV3_1G036390.1	mRNA