CsaV3_1G035810 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G035810
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	17.5 kDa class I heat shock protein-like
Location	chr1: 21892088 .. 21894018 (-)
RNA-Seq Expression	CsaV3_1G035810
Synteny	CsaV3_1G035810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATAATTCCAATCACCGGTCAAGACGGCCGTATTTCCAACCCTTTCCCTTCAAACAGCCTCAATCGTTTCCCAAATTTCCCCTTCCCTCTAGATCTATGGCACGATTTCCCTCTCCCTTCCTCATTCTCCGGTCCCTTCTCTTGGGGAGCCACCGTCAACACTCACCTCGATTGGACTGAGACCCCTAACGCTCATGTCCTCAGAGCTTCCCTTCCCGGGTTCGGCAGTGAAGACGTGCTCGTCGAGCTTCAGGATGATCGGATGCTTCAGATCAGCACTGAAAGCGGTGGTTTCCTTAGTAGATTCAAGATTCCGGAGAGTGGGAAAATTGAGGAGTTGAGTGCGTTTATGGATTTTGGGGTTCTTACTGTGTTTGTTCCTAAAGAAGAAGATGATCGGAGTGGACGCGATGTGCGGGTGGTGGAGATCACTGGGGAGTAAAGTTCGCCATTGTAGACAAGTAAGACTCTGAATTTGAATGTTGTGTTTAGGATGAGAATCTGCTTGTGATTTTATGTGTACTGTACTTTGAAGTTGGATTGCTCACCATGTGTTTGATAAAATGTTTCTGTGGCTGTGGTAGTGTAAATGTGTGGGTTTTCTGTTTATCTTAGAATGTAGATGTATATCAATATAAAATTTGTGACGGTTTTCTACTTAGATTCCAATTTTCACAAAAAGAAAATAAATATTGTTAGTTTAAAGGTTAAATTTGTATTTATTTTTTGGAATAGGATGCTCCCAAGGACCTAAATTATTTACCTATTTGCTATCTTTACATTTACATTATTTATGATCCTGGCCTTAGTTGTAGAGACTTCTCTCTCAAATAAAATTGTTGTTAGTGGAGTAAGTTTGAGTTAATCACGTAAAATTTCATACGTTTTTTATTATTTGGAGTAGTGTATCTGGTCTTTGGACTATCACTTTACTAATGATTCCTAGATATCAAAAAGCATACATTGGTCATGTTGATAAAAAAAAAATCTGATGCACCGACTCTAAATTTGTATTTTTTTTGGAGAGTAAACTGTTGAGTCAAATCCACCTTGATTGTTCACAGCTTGAAATGATGTAAATGAGCCTTAATCCATTGGTAGGTGGCATGACAAGTAAAGTTGTCCACGTATGTATGTAAGTAGTGGCAGATCTAAAAATTTTATTGATAGAGGCATTGATAGAGGCTTCGAGTTAGTCCCCTGAATCTATACTAAGTAATGTAGTTGGTGTTGTTTGGCCATGGGCAAGTATATATGTGAGCAGTTAGGTTTTATAGATTAGTAAAAAATAAAACTTAGGTCTATTACCACGAAATTCATACTGTATTAATTAATTTTATATATATATGTAATTGATATTATATTTATATATATAATATAAAGAATATAAAGTTGAGCTCGAGTCTAGGCTTATACTAAATTCGCGTATGTGAGCAGTAAGCACTAAAAGTAATTATATTTGAAGGGAGGGTTAATTAATTGCACATTGGAGGTCTATCCAAGAGTTGAGCCTATTGAAGGCACTGTGGTTAACAGTTAAAATAAAAAAATCAGTAGTAGTGGAGGGAATGTATTGTTCAAGCTACTCAAATACAAATTTTAAACACTAAGAAGGAGAAGGAGTTTGGCGTGCAGGTTCAGGTTCAAAATCAAATGTTTGGAAATGATGTCTGATTAATGCCTGCATTTGAGGGCAGGAATTGAGTGCATGAATGGGTAATATGTTTTTTTTTGTCAATGGTACCA

mRNA sequence

ATGTCCATAATTCCAATCACCGGTCAAGACGGCCGTATTTCCAACCCTTTCCCTTCAAACAGCCTCAATCGTTTCCCAAATTTCCCCTTCCCTCTAGATCTATGGCACGATTTCCCTCTCCCTTCCTCATTCTCCGGTCCCTTCTCTTGGGGAGCCACCGTCAACACTCACCTCGATTGGACTGAGACCCCTAACGCTCATGTCCTCAGAGCTTCCCTTCCCGGGTTCGGCAGTGAAGACGTGCTCGTCGAGCTTCAGGATGATCGGATGCTTCAGATCAGCACTGAAAGCGGTGGTTTCCTTAGTAGATTCAAGATTCCGGAGAGTGGGAAAATTGAGGAGTTGAGTGCGTTTATGGATTTTGGGGTTCTTACTGTGTTTGTTCCTAAAGAAGAAGATGATCGGAGTGGACGCGATGTGCGGGTGGTGGAGATCACTGGGGAGTAA

Coding sequence (CDS)

ATGTCCATAATTCCAATCACCGGTCAAGACGGCCGTATTTCCAACCCTTTCCCTTCAAACAGCCTCAATCGTTTCCCAAATTTCCCCTTCCCTCTAGATCTATGGCACGATTTCCCTCTCCCTTCCTCATTCTCCGGTCCCTTCTCTTGGGGAGCCACCGTCAACACTCACCTCGATTGGACTGAGACCCCTAACGCTCATGTCCTCAGAGCTTCCCTTCCCGGGTTCGGCAGTGAAGACGTGCTCGTCGAGCTTCAGGATGATCGGATGCTTCAGATCAGCACTGAAAGCGGTGGTTTCCTTAGTAGATTCAAGATTCCGGAGAGTGGGAAAATTGAGGAGTTGAGTGCGTTTATGGATTTTGGGGTTCTTACTGTGTTTGTTCCTAAAGAAGAAGATGATCGGAGTGGACGCGATGTGCGGGTGGTGGAGATCACTGGGGAGTAA

Protein sequence

MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDWTETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMDFGVLTVFVPKEEDDRSGRDVRVVEITGE*

Homology

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BLAST of CsaV3_1G035810 vs. NCBI nr
Match: XP_004153731.1 (17.5 kDa class I heat shock protein [Cucumis sativus] >KGN65769.1 hypothetical protein Csa_023246 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 6.2e-81
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60
           MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW
Sbjct: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60

Query: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120
           TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD
Sbjct: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120

Query: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 149
           FGVLTVFVPKEEDDRSGRDVRVVEITGE
Sbjct: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 148

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BLAST of CsaV3_1G035810 vs. NCBI nr
Match: XP_008457423.1 (PREDICTED: 17.5 kDa class I heat shock protein-like [Cucumis melo] >TYJ97356.1 17.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 293.1 bits (749), Expect = 1.3e-75
Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60
           MSIIPITGQDGR+SNP PSN LNRFPNFPFPLDLWHDFP PSS S PFSWGATVNT LDW
Sbjct: 1   MSIIPITGQDGRVSNPSPSNILNRFPNFPFPLDLWHDFPFPSSISDPFSWGATVNTRLDW 60

Query: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120
           TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGF+SRFKIPESGKIEELSAFMD
Sbjct: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFVSRFKIPESGKIEELSAFMD 120

Query: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 149
           FGVLTVFVPK+EDDRSGRDVRVVEITGE
Sbjct: 121 FGVLTVFVPKDEDDRSGRDVRVVEITGE 148

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BLAST of CsaV3_1G035810 vs. NCBI nr
Match: KAA0031776.1 (17.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 292.0 bits (746), Expect = 3.0e-75
Identity = 138/148 (93.24%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60
           MSIIPITGQDGR+SNP PSN LNRFPNFPFPLDLWHDFP PSS S PFSWGATVNT LDW
Sbjct: 1   MSIIPITGQDGRVSNPSPSNILNRFPNFPFPLDLWHDFPFPSSISDPFSWGATVNTRLDW 60

Query: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120
           TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGF+SRFKIPESGKIEELSAFMD
Sbjct: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFVSRFKIPESGKIEELSAFMD 120

Query: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 149
           FGVLTVFVPK+EDDRSGRDVRVVEITG+
Sbjct: 121 FGVLTVFVPKDEDDRSGRDVRVVEITGD 148

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BLAST of CsaV3_1G035810 vs. NCBI nr
Match: XP_038894363.1 (17.5 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 133/148 (89.86%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60
           MSIIPI GQDGRIS+  PSN LNRFPNFPFPLDLWH FP PSS S PFSWG  VNTHLDW
Sbjct: 1   MSIIPIAGQDGRISSTSPSNILNRFPNFPFPLDLWHGFPFPSSISDPFSWGGNVNTHLDW 60

Query: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120
           TETPNAHV+RASLPGFGSEDVLVELQDDRMLQISTESGGF+SRFKIPESGKIEELSAFMD
Sbjct: 61  TETPNAHVVRASLPGFGSEDVLVELQDDRMLQISTESGGFVSRFKIPESGKIEELSAFMD 120

Query: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 149
           FG+LTVFVPKEEDDRS RDVRVVEITGE
Sbjct: 121 FGILTVFVPKEEDDRSRRDVRVVEITGE 148

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BLAST of CsaV3_1G035810 vs. NCBI nr
Match: ADU55785.1 (HSP16.5 [Citrullus lanatus])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 133/148 (89.86%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60
           MSIIPI GQDGRISN  PSN LNRFPNFPFPLDLWHDFP PSS S PFSWG TVNT LDW
Sbjct: 1   MSIIPIGGQDGRISNTSPSNILNRFPNFPFPLDLWHDFPFPSSISDPFSWGGTVNTRLDW 60

Query: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120
           TETPNAHVLRASLPGFG EDVLVELQDDRMLQISTESGGF+SRFKIPE+GKIEELSAFMD
Sbjct: 61  TETPNAHVLRASLPGFGGEDVLVELQDDRMLQISTESGGFVSRFKIPETGKIEELSAFMD 120

Query: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 149
           FG+LTVFVPKE+DDRS RDVRVVEITGE
Sbjct: 121 FGILTVFVPKEDDDRSRRDVRVVEITGE 148

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BLAST of CsaV3_1G035810 vs. ExPASy Swiss-Prot
Match: P04793 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.0e-25
Identity = 74/169 (43.79%), Postives = 96/169 (56.80%), Query Frame = 0


Query: 1   MSIIP-ITGQDGRISNPFPSNSLNRFPNFPFPLDLW---HDFPLPSSFSGPFSWGATVNT 60
           MS+IP I G  GR SN F           PF LD+W    DF  P+S S   S  A VNT
Sbjct: 1   MSLIPSIFG--GRRSNVFD----------PFSLDVWDPFKDFHFPTSLSAENS--AFVNT 60

Query: 61  HLDWTETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTE------------------SG 120
            +DW ETP AHV  A +PG   E+V V+++DDR+LQIS E                  SG
Sbjct: 61  RVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSG 120

Query: 121 GFLSRFKIPESGKIEELSAFMDFGVLTVFVPKEEDDRSGRDVRVVEITG 148
            F+ RF++PE+ K+E++ A M+ GVLTV VPKEE  +   DV+ +EI+G
Sbjct: 121 NFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKP--DVKAIEISG 153

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BLAST of CsaV3_1G035810 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-23
Identity = 71/170 (41.76%), Postives = 95/170 (55.88%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLW---HDFPLPSSFSGPF--SWGATVN 60
           MSIIP +   GR SN F           PF LD+W    DFPL +S +  F     A VN
Sbjct: 1   MSIIP-SFFGGRRSNVFD----------PFSLDVWDPFKDFPLVTSSASEFGKETAAFVN 60

Query: 61  THLDWTETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTE------------------S 120
           TH+DW ETP AHV +A LPG   E+V VEL++ ++LQIS E                  S
Sbjct: 61  THIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSS 120

Query: 121 GGFLSRFKIPESGKIEELSAFMDFGVLTVFVPKEEDDRSGRDVRVVEITG 148
           G FL RF++PE+ K++E+ A M  GV+TV VPK E  +   +V+ ++I+G
Sbjct: 121 GKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKP--EVKAIDISG 157

[Close]

BLAST of CsaV3_1G035810 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.1e-23
Identity = 69/170 (40.59%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 1   MSIIP--ITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGP-FSW--GATVN 60
           MS+IP    G+   + +PF  +  + F +FPFP  L       SS S P FS    A V+
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTL-------SSASFPEFSRENSAFVS 60

Query: 61  THLDWTETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTE------------------S 120
           T +DW ETP AHV +A +PG   E+V V+++DD++LQIS E                  S
Sbjct: 61  TRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSS 120

Query: 121 GGFLSRFKIPESGKIEELSAFMDFGVLTVFVPKEEDDRSGRDVRVVEITG 148
           G F+ RF++PE+ K+E++ A M+ GVLTV VPKEE  +   DV+ +EI+G
Sbjct: 121 GKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKP--DVKAIEISG 161

[Close]

BLAST of CsaV3_1G035810 vs. ExPASy Swiss-Prot
Match: P04795 (17.6 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.6-L PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.7e-23
Identity = 62/140 (44.29%), Postives = 86/140 (61.43%), Query Frame = 0


Query: 29  PFPLDLW---HDFPLPSSFSGPFSWGATVNTHLDWTETPNAHVLRASLPGFGSEDVLVEL 88
           PF LD+W    DF +P+S S      A VNT +DW ET  AHVL+A +PG   E+V V++
Sbjct: 18  PFSLDMWDPFKDFHVPTS-SVSAENSAFVNTRVDWKETQEAHVLKADIPGLKKEEVKVQI 77

Query: 89  QDDRMLQISTE------------------SGGFLSRFKIPESGKIEELSAFMDFGVLTVF 148
           +DDR+LQIS E                  SG F+ RF++PE+ K+E++ A M+ GVLTV 
Sbjct: 78  EDDRVLQISGERNVEKEDKNDTWHRVDRSSGKFMRRFRLPENAKVEQVKACMENGVLTVT 137

[Close]

BLAST of CsaV3_1G035810 vs. ExPASy Swiss-Prot
Match: P19243 (18.1 kDa class I heat shock protein OS=Pisum sativum OX=3888 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-23
Identity = 72/171 (42.11%), Postives = 97/171 (56.73%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLW---HDFPLPS---SFSGPFSWGATV 60
           MS+IP +   GR SN F           PF LD+W    DFP  +   S S P    A V
Sbjct: 1   MSLIP-SFFSGRRSNVFD----------PFSLDVWDPLKDFPFSNSSPSASFPRENPAFV 60

Query: 61  NTHLDWTETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTE------------------ 120
           +T +DW ETP AHV +A LPG   E+V VE++DDR+LQIS E                  
Sbjct: 61  STRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERS 120

Query: 121 SGGFLSRFKIPESGKIEELSAFMDFGVLTVFVPKEEDDRSGRDVRVVEITG 148
           SG FL RF++PE+ K++++ A M+ GVLTV VPKEE  ++  +V+ +EI+G
Sbjct: 121 SGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKA--EVKSIEISG 158

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BLAST of CsaV3_1G035810 vs. ExPASy TrEMBL
Match: A0A0A0LXH9 (Low molecular weight heat-shock protein OS=Cucumis sativus OX=3659 GN=Csa_1G527860 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.0e-81
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60
           MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW
Sbjct: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60

Query: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120
           TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD
Sbjct: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120

Query: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 149
           FGVLTVFVPKEEDDRSGRDVRVVEITGE
Sbjct: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 148

[Close]

BLAST of CsaV3_1G035810 vs. ExPASy TrEMBL
Match: A0A5D3BEA9 (17.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001660 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.5e-76
Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60
           MSIIPITGQDGR+SNP PSN LNRFPNFPFPLDLWHDFP PSS S PFSWGATVNT LDW
Sbjct: 1   MSIIPITGQDGRVSNPSPSNILNRFPNFPFPLDLWHDFPFPSSISDPFSWGATVNTRLDW 60

Query: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120
           TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGF+SRFKIPESGKIEELSAFMD
Sbjct: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFVSRFKIPESGKIEELSAFMD 120

Query: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 149
           FGVLTVFVPK+EDDRSGRDVRVVEITGE
Sbjct: 121 FGVLTVFVPKDEDDRSGRDVRVVEITGE 148

[Close]

BLAST of CsaV3_1G035810 vs. ExPASy TrEMBL
Match: A0A1S3C660 (17.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497114 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.5e-76
Identity = 139/148 (93.92%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60
           MSIIPITGQDGR+SNP PSN LNRFPNFPFPLDLWHDFP PSS S PFSWGATVNT LDW
Sbjct: 1   MSIIPITGQDGRVSNPSPSNILNRFPNFPFPLDLWHDFPFPSSISDPFSWGATVNTRLDW 60

Query: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120
           TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGF+SRFKIPESGKIEELSAFMD
Sbjct: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFVSRFKIPESGKIEELSAFMD 120

Query: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 149
           FGVLTVFVPK+EDDRSGRDVRVVEITGE
Sbjct: 121 FGVLTVFVPKDEDDRSGRDVRVVEITGE 148

[Close]

BLAST of CsaV3_1G035810 vs. ExPASy TrEMBL
Match: A0A5A7SP59 (17.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00160 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.4e-75
Identity = 138/148 (93.24%), Postives = 142/148 (95.95%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60
           MSIIPITGQDGR+SNP PSN LNRFPNFPFPLDLWHDFP PSS S PFSWGATVNT LDW
Sbjct: 1   MSIIPITGQDGRVSNPSPSNILNRFPNFPFPLDLWHDFPFPSSISDPFSWGATVNTRLDW 60

Query: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120
           TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGF+SRFKIPESGKIEELSAFMD
Sbjct: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFVSRFKIPESGKIEELSAFMD 120

Query: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 149
           FGVLTVFVPK+EDDRSGRDVRVVEITG+
Sbjct: 121 FGVLTVFVPKDEDDRSGRDVRVVEITGD 148

[Close]

BLAST of CsaV3_1G035810 vs. ExPASy TrEMBL
Match: H6TB38 (HSP16.5 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.7e-72
Identity = 133/148 (89.86%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60
           MSIIPI GQDGRISN  PSN LNRFPNFPFPLDLWHDFP PSS S PFSWG TVNT LDW
Sbjct: 1   MSIIPIGGQDGRISNTSPSNILNRFPNFPFPLDLWHDFPFPSSISDPFSWGGTVNTRLDW 60

Query: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEELSAFMD 120
           TETPNAHVLRASLPGFG EDVLVELQDDRMLQISTESGGF+SRFKIPE+GKIEELSAFMD
Sbjct: 61  TETPNAHVLRASLPGFGGEDVLVELQDDRMLQISTESGGFVSRFKIPETGKIEELSAFMD 120

Query: 121 FGVLTVFVPKEEDDRSGRDVRVVEITGE 149
           FG+LTVFVPKE+DDRS RDVRVVEITGE
Sbjct: 121 FGILTVFVPKEDDDRSRRDVRVVEITGE 148

[Close]

BLAST of CsaV3_1G035810 vs. TAIR 10
Match: AT2G19310.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 9.7e-24
Identity = 65/162 (40.12%), Postives = 92/162 (56.79%), Query Frame = 0


Query: 1   MSIIPITGQ-----DGRISNPFPSNSLNRFPNFPFP-LDLWHDFPLPSSFSGPFSWGATV 60
           MS+IPI+ +       RI  PF    +N F +FP P L L H FP  S    P +  +TV
Sbjct: 1   MSMIPISNRRRLSPGDRIWEPF--ELMNTFLDFPSPALFLSHHFPSLSREIFPQTSSSTV 60

Query: 61  NTHLDWTETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTESGGFLSRFKIPESGKIEE 120
           NT L+WTETP AHV +A LPG   ++V+  + ++  LQI T    F+SRFK+P +   ++
Sbjct: 61  NTQLNWTETPTAHVFKAYLPGVDQDEVIAFVDEEGYLQICTGDNKFMSRFKLPNNALTDQ 120

Query: 121 LSAFMDFGVLTVFVPKEEDD--------RSGRDVRVVEITGE 149
           ++A+M+   L VFV K+              R+VRVVEITG+
Sbjct: 121 VTAWMEDEFLVVFVEKDASSSPPQLPEIEENRNVRVVEITGD 160

[Close]

BLAST of CsaV3_1G035810 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.1e-22
Identity = 64/168 (38.10%), Postives = 88/168 (52.38%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDF---PLPSSFSGPFSWGATVNTH 60
           MS+IP    + R SN             PF LD+W  F     PSS SG  S  A  N  
Sbjct: 1   MSLIPSFFGNNRRSNSIFD---------PFSLDVWDPFKELQFPSSLSGETS--AITNAR 60

Query: 61  LDWTETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTE------------------SGG 120
           +DW ET  AHV +A LPG   E+V VE++DD +L+IS E                  SG 
Sbjct: 61  VDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQ 120

Query: 121 FLSRFKIPESGKIEELSAFMDFGVLTVFVPKEEDDRSGRDVRVVEITG 148
           F  +FK+PE+ K++++ A M+ GVLTV VPK E+ +    V+ ++I+G
Sbjct: 121 FSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of CsaV3_1G035810 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 3.1e-22
Identity = 63/165 (38.18%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 1   MSIIPITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFPLPSSFSGPFSWGATVNTHLDW 60
           MS+IP    + R SN F           PF LD+W  F   +S S      A VN  +DW
Sbjct: 1   MSMIPSFFNNNRRSNIFD----------PFSLDVWDPFKELTSSSLSRENSAIVNARVDW 60

Query: 61  TETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTE------------------SGGFLS 120
            ETP AHV +A LPG   E+V VE+++D +L+IS E                  SG F  
Sbjct: 61  RETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTR 120

Query: 121 RFKIPESGKIEELSAFMDFGVLTVFVPKEEDDRSGRDVRVVEITG 148
           RF++PE+ K++++ A M+ GVLTV VPK E  ++  DV+ ++I+G
Sbjct: 121 RFRLPENVKMDQVKAAMENGVLTVTVPKAETKKA--DVKSIQISG 153

[Close]

BLAST of CsaV3_1G035810 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 4.1e-22
Identity = 65/169 (38.46%), Postives = 91/169 (53.85%), Query Frame = 0


Query: 1   MSIIP-ITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDF---PLPSSFSGPFSWGATVNT 60
           MS+IP   G + RI+N       N F   PF LD+W  F     PSS S      A  N 
Sbjct: 1   MSLIPSFFGNNRRINN-------NIFD--PFSLDVWDPFKELQFPSSSS-----SAIANA 60

Query: 61  HLDWTETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTE------------------SG 120
            +DW ET  AHV +A LPG   E+V VE++DD +L+IS E                  SG
Sbjct: 61  RVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSG 120

Query: 121 GFLSRFKIPESGKIEELSAFMDFGVLTVFVPKEEDDRSGRDVRVVEITG 148
           GF  +F++PE+ K++++ A M+ GVLTV VPK E ++    V+ ++I+G
Sbjct: 121 GFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSIDISG 155

[Close]

BLAST of CsaV3_1G035810 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 95.5 bits (236), Expect = 3.8e-20
Identity = 68/173 (39.31%), Postives = 88/173 (50.87%), Query Frame = 0


Query: 1   MSIIP-ITGQDGRISNPFPSNSLNRFPNFPFPLDLWHDFP---LPSSFSGPFSW----GA 60
           MS+IP I G  GR SN F           PF  DLW  F     PSS     S      A
Sbjct: 1   MSLIPSIFG--GRRSNVFD----------PFSQDLWDPFEGFFTPSSALANASTARDVAA 60

Query: 61  TVNTHLDWTETPNAHVLRASLPGFGSEDVLVELQDDRMLQISTE---------------- 120
             N  +DW ETP AHV +A LPG   E+V VE++D  +LQIS E                
Sbjct: 61  FTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVE 120

Query: 121 --SGGFLSRFKIPESGKIEELSAFMDFGVLTVFVPKEEDDRSGRDVRVVEITG 148
             SG F+ RF++PE+ K+EE+ A M+ GVLTV VPK  + +    V+ ++I+G
Sbjct: 121 RASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKP--QVKSIDISG 159

The following BLAST results are available for this feature:

BLAST of CsaV3_1G035810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153731.1	6.2e-81	100.00	17.5 kDa class I heat shock protein [Cucumis sativus] >KGN65769.1 hypothetical p...	[more]
XP_008457423.1	1.3e-75	93.92	PREDICTED: 17.5 kDa class I heat shock protein-like [Cucumis melo] >TYJ97356.1 1...	[more]
KAA0031776.1	3.0e-75	93.24	17.5 kDa class I heat shock protein-like [Cucumis melo var. makuwa]	[more]
XP_038894363.1	1.2e-71	89.86	17.5 kDa class I heat shock protein-like [Benincasa hispida]	[more]
ADU55785.1	1.2e-71	89.86	HSP16.5 [Citrullus lanatus]	[more]

BLAST of CsaV3_1G035810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04793	5.0e-25	43.79	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=...	[more]
P27396	2.1e-23	41.76	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P05478	2.1e-23	40.59	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P04795	2.7e-23	44.29	17.6 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.6-L PE=3 SV=...	[more]
P19243	3.6e-23	42.11	18.1 kDa class I heat shock protein OS=Pisum sativum OX=3888 GN=HSP18.1 PE=1 SV=...	[more]

BLAST of CsaV3_1G035810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXH9	3.0e-81	100.00	Low molecular weight heat-shock protein OS=Cucumis sativus OX=3659 GN=Csa_1G5278...	[more]
A0A5D3BEA9	6.5e-76	93.92	17.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3C660	6.5e-76	93.92	17.5 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103497114...	[more]
A0A5A7SP59	1.4e-75	93.24	17.5 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
H6TB38	5.7e-72	89.86	HSP16.5 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]

BLAST of CsaV3_1G035810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19310.1	9.7e-24	40.12	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	3.1e-22	38.10	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	3.1e-22	38.18	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	4.1e-22	38.46	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	3.8e-20	39.31	heat shock protein 18.2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 59..145 e-value: 1.2E-7 score: 31.8
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 49..146 score: 13.743686
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 29..146 e-value: 4.5E-16 score: 60.9
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 26..135
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..147
None	No IPR available	PANTHER	PTHR11527:SF320	17.5 KDA CLASS I HEAT SHOCK PROTEIN	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G035810.1	CsaV3_1G035810.1	mRNA