CsaV3_1G034630 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGTCGTTCCACGGCGGCGATCCACCTCCACCAGAATCCACATCCTCGCCCTCGACGGCATCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTTGGCGTGGCGTGGTACCCCACCGCCAACCCGGCTGCCAATCTCCTCCCGGACGACGACGACGGTCCTTGCGCTGCTGCCGATTCTGTCGCCGAAAATCTCATAGCCTGCCATGTATACTCTTTCAGCTGCTTCTTGTTCTCCAGCCTAATCGCGTCGGCGCTGAAGCAAGCAATCAGACTCATCACAGGCGGTGATGGTGGGCAGGGTGAGACCCACGCACCGGCGCTGAGGGTGGGGATGATGGCGTCTGCGGTTGGGTCGGTTCTCGGGTGTGGGTTTTTGGTGGCGGCGTTGCTGAATTTGATTCAGATAAAACTGGGGGTTTTCGGTTGCCGGAGGTGGGAGACGGTGGCGGCCGCCGTGCCGTTGGTGAGCTTGGTTCCTTTGGCGCTTTTCATTTACATCGCGCTTGTTATTCACGCCTTCACGCGCTAGCATTCATTTTTTCATTTTTTTACATTAATGTTTACTTTTTTTAAAAAAAAATAATTTAGTTAAATGCTTCATTGTGGTTACAAGAATACGTCTGTGTGTGTATGTAACTTATAAAAGCTTTTAAGTTGTAAATTCATGTGTAAAAATGTGACAGCTTCTGCGACCTTAGTTTCGTATTAGTTTATGATTCAATTTTCAAGTCGGTAAGAAATCGTAGAAAATCATTGTGTGTTCAAATGTTGATCTCAACTATAAATATGAAACATCATAATTTAAGAGCGTAAATATGTTCAACTAATAAATTATATAATTTTCTCACTTTATGAGGGTATGAATTGAGGTGGTTACACGTCAAATGGAGTATCTTTTTTATAGATTGGTGAGATCAAGACTATAAATTAATTAAAACATCAAAACTTATCTGAGTAGATAGTAGATACACAATGAATAACTTCCTTTCTACTTTTTAAACTCTAAATTTGTCATTCACTTCAAAATAACTTCCTTTCTACTTTTTAAACTCTAAATTTGTCATTCACTTCAAATGGTTATAATTATAACCAAGTTATATATATATATATGTGTATATATATATATATATATATATATATTTTTGACAGTATTCATGGTTGAATTTTAACCATTTGAATTAAGTGGAATTCTTTAGAAGGATTATTTATGAGAAACTTTTCACCAAAGACAGCAAAACATAAGAGAAACAGCAAAGCTTTCTTCTTTTTTTTTTTCTTTTTTAATATAAGAGAAATCAGAGAAAAGAAAATACAGAGAACTCCACACCATTTTCAAATGTAAGTAAAAACCAAACAGGAAATTTGAAATGGTATACACAATATGTAATGTAAAACAAATACCCAACTTCAAAGCTTCATCTGTGCTCTGCTGCTTTTTATGAATTCCTGCATTGAAAAAAACTAAGCCATTTCAAGGATACCACAAATACAAAATGTGTTGAACAGAAATGTAAGCCGATAGAGGAACAGAGTAAAACAGACCAAACCAACCACAAAAATAAAATGTGTTGCATAATACAAATTGTCCCATTGCCCACACAGCTCGCTTCACCCTCAAACCATCGCATCGCATCCCATAATTAAAGAGCCTACTACCTCAAACCAACAAACGGCCCAACCCATGATTTCAAGTTGGAGGAATCTCTTTACAAGAAGGGGTCCCAGCTATACGAAATAGTACCTATAGAATAACTGCAAAGAAAAAAACTATGGAAAACATCTCACAAGGGACCGTAACTCTCTAGAATCCCTCCTCTCAATACCCCTAAAAACCCGATTGTTCAAGATTAAAGCTAAATAGGGAGTGTTCAATTCTAGCCACCTACCTAAATCTAATATCCAATAAATTTCTTTGACGCTAAAATGTCGTAGAATCAAGAGGTTTGTCCTGTGCAAGCTAGCTCGAACACTTACAAATTTCGAACAAAAATGGAACGTCTCAAGCTAAAAGACAGAAAATTTTACTGCCATCTAAGCTTTTTTCTTACATCTGTTGTACATTTTGGAAGTAATAAGAAATGATATGATATAGTGTTAGACATGTCTCGAAAAGTTGAAAAACATGAAAAGAATTCTACCTTTTTCCGTGAGATCTATTTATAATTGTAGAAACATTATTAAAACATAAGAATTGGATCATCTTTTAATCCTTTTTCCTTATACCATGAGGAGTTCGGTATCTCTCATATAAATGTGTTCAAATGGAAATATGGTTCAAATGCTTTGCATCCATCCTTTAAAGCAAAAGGAAAAGATTCTATTGGTCAATGCTATTAAACCAAACACTAAAGAATATATGGATGGAAAGAAATGATAGATTTTCTTTTTCCCACAAAGCCAAGAAATAGGTAGTGGGAGTAGGAGGAATGGGCAAAATTCAACGATTCTCTTGGATATTAAGGCAAACAAAGAGTCTTTGTATCTATCTTTTTTTTTTTTTTTTTCCTCTTCTCTAAGTTTAACTATTGCAGACTTGAAAGATCCAACCATCAACCAAGGATAGTCATTAATTCCGAATCCCCTAAGCTATACTCGGGTTATGAAGAGTCTTGTATTTGTACACCATCCAATATCGACGCGCAAATCAGGGAAGAAAGTTTGAGGTACAGTTTTTTGAGAAATAGTTTTATATTTTATGCATCTGTTTATAATTTTTCACATTCAATAGGAAAACCTTGTTTCTCATGATCTAAAAGAGAGCAAAAATAAAACAAGAAACATCATTAAATTACGTATATCTAAAACATCAAAAATAAGAAACAACTTTACCAAACAACTCCTATACCTTCGCACAACAGTGACATAGAAAAGTCATGGGATTTAATAAATTAAATCATAGATTAGATGATAATTTGACTAAATGTCTGAAATTTCCTATTTATTTGGTATATTAGTGGGGCTACAAGGAAGCAGGTTTTAAGCTTTCACATTATATCAAGTGGGTGAAAACTGAATACAAGGGCGATGGAAGTTTAACAACGTTGGTCCCAGTTGATTCTCTATGCTTAAAATAA ATGTCCGTCGTTCCACGGCGGCGATCCACCTCCACCAGAATCCACATCCTCGCCCTCGACGGCATCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTTGGCGTGGCGTGGTACCCCACCGCCAACCCGGCTGCCAATCTCCTCCCGGACGACGACGACGGTCCTTGCGCTGCTGCCGATTCTGTCGCCGAAAATCTCATAGCCTGCCATGTATACTCTTTCAGCTGCTTCTTGTTCTCCAGCCTAATCGCGTCGGCGCTGAAGCAAGCAATCAGACTCATCACAGGCGGTGATGGTGGGCAGGGTGAGACCCACGCACCGGCGCTGAGGGTGGGGATGATGGCGTCTGCGGTTGGGTCGGTTCTCGGGTGTGGGTTTTTGGTGGCGGCGTTGCTGAATTTGATTCAGATAAAACTGGGGGTTTTCGGTTGCCGGAGGTGGGAGACGGTGGCGGCCGCCGTGCCGTTGGTGAGCTTGGTTCCTTTGGCGCTTTTCATTTACATCGCGCTTTGGGGCTACAAGGAAGCAGGTTTTAAGCTTTCACATTATATCAAGTGGGTGAAAACTGAATACAAGGGCGATGGAAGTTTAACAACGTTGGTCCCAGTTGATTCTCTATGCTTAAAATAA ATGTCCGTCGTTCCACGGCGGCGATCCACCTCCACCAGAATCCACATCCTCGCCCTCGACGGCATCGTTAACGTCAACTCCCTCTTCACCTTCGCCGTTTTCCTTGGCGTGGCGTGGTACCCCACCGCCAACCCGGCTGCCAATCTCCTCCCGGACGACGACGACGGTCCTTGCGCTGCTGCCGATTCTGTCGCCGAAAATCTCATAGCCTGCCATGTATACTCTTTCAGCTGCTTCTTGTTCTCCAGCCTAATCGCGTCGGCGCTGAAGCAAGCAATCAGACTCATCACAGGCGGTGATGGTGGGCAGGGTGAGACCCACGCACCGGCGCTGAGGGTGGGGATGATGGCGTCTGCGGTTGGGTCGGTTCTCGGGTGTGGGTTTTTGGTGGCGGCGTTGCTGAATTTGATTCAGATAAAACTGGGGGTTTTCGGTTGCCGGAGGTGGGAGACGGTGGCGGCCGCCGTGCCGTTGGTGAGCTTGGTTCCTTTGGCGCTTTTCATTTACATCGCGCTTTGGGGCTACAAGGAAGCAGGTTTTAAGCTTTCACATTATATCAAGTGGGTGAAAACTGAATACAAGGGCGATGGAAGTTTAACAACGTTGGTCCCAGTTGATTCTCTATGCTTAAAATAA MSVVPRRRSTSTRIHILALDGIVNVNSLFTFAVFLGVAWYPTANPAANLLPDDDDGPCAAADSVAENLIACHVYSFSCFLFSSLIASALKQAIRLITGGDGGQGETHAPALRVGMMASAVGSVLGCGFLVAALLNLIQIKLGVFGCRRWETVAAAVPLVSLVPLALFIYIALWGYKEAGFKLSHYIKWVKTEYKGDGSLTTLVPVDSLCLK* Homology
BLAST of CsaV3_1G034630 vs. NCBI nr
Match: KAE8653265.1 (hypothetical protein Csa_020061 [Cucumis sativus] >KAE8653271.1 hypothetical protein Csa_023219 [Cucumis sativus]) HSP 1 Score: 417.2 bits (1071), Expect = 8.7e-113 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. NCBI nr
Match: XP_011658339.1 (uncharacterized protein LOC101206623 [Cucumis sativus] >XP_031741170.1 uncharacterized protein LOC116403759 [Cucumis sativus]) HSP 1 Score: 332.0 bits (850), Expect = 3.7e-87 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. NCBI nr
Match: XP_008457431.1 (PREDICTED: uncharacterized protein LOC103497122 [Cucumis melo] >TYJ97365.1 uncharacterized protein E5676_scaffold194G001760 [Cucumis melo var. makuwa]) HSP 1 Score: 322.8 bits (826), Expect = 2.2e-84 Identity = 165/172 (95.93%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. NCBI nr
Match: KAA0031767.1 (uncharacterized protein E6C27_scaffold848G00060 [Cucumis melo var. makuwa]) HSP 1 Score: 318.9 bits (816), Expect = 3.2e-83 Identity = 163/172 (94.77%), Postives = 168/172 (97.67%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. NCBI nr
Match: XP_022970573.1 (uncharacterized protein LOC111469508 [Cucurbita maxima]) HSP 1 Score: 290.0 bits (741), Expect = 1.6e-74 Identity = 144/172 (83.72%), Postives = 158/172 (91.86%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. ExPASy TrEMBL
Match: A0A0A0LV03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G525310 PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 1.8e-87 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. ExPASy TrEMBL
Match: A0A5D3BFZ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001760 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84 Identity = 165/172 (95.93%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. ExPASy TrEMBL
Match: A0A1S3C532 (uncharacterized protein LOC103497122 OS=Cucumis melo OX=3656 GN=LOC103497122 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 1.1e-84 Identity = 165/172 (95.93%), Postives = 170/172 (98.84%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. ExPASy TrEMBL
Match: A0A5A7SQP6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00060 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83 Identity = 163/172 (94.77%), Postives = 168/172 (97.67%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. ExPASy TrEMBL
Match: A0A6J1I4A7 (uncharacterized protein LOC111469508 OS=Cucurbita maxima OX=3661 GN=LOC111469508 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 7.8e-75 Identity = 144/172 (83.72%), Postives = 158/172 (91.86%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 ) HSP 1 Score: 152.9 bits (385), Expect = 2.9e-37 Identity = 96/174 (55.17%), Postives = 116/174 (66.67%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 136.0 bits (341), Expect = 3.6e-32 Identity = 90/188 (47.87%), Postives = 119/188 (63.30%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27 Identity = 79/174 (45.40%), Postives = 105/174 (60.34%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27 Identity = 79/174 (45.40%), Postives = 105/174 (60.34%), Query Frame = 0
BLAST of CsaV3_1G034630 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 100.9 bits (250), Expect = 1.3e-21 Identity = 62/165 (37.58%), Postives = 100/165 (60.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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