CsaV3_1G034400 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G034400
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 21556529 .. 21558136 (+)
RNA-Seq ExpressionCsaV3_1G034400
SyntenyCsaV3_1G034400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGGTGGTTTTAGTCACCGGTTATAGCCGGTAAACTAAGAGGCAAACTTACCGATAGGTCCGGTGAAGAGGGTCAATGGTATAAGATAGCTGGGGTTTAAGCATTATGTGTTTAGGTGGTTTTTCAAAGGGTTTTGGCGATCGGAATTTTTATTTTTACTGAGAGAAGAAGAAGAAGAAAAAAATAAAAGGAAAATAAATTTAGTTTTCAAACTTTGTTTTTGGTTTGGTGTTGGGAATTTTTATTTTTTCTTTTGGATTAAAGCGAAAAATTTAAAAAGAAAAAAAAGGAGATGGGATAGAAAACGAGAGAATGTGGTGAATCAATCAAAGCCAATCCTTGTTTTGTTCTTCGATTTCATTTCTAATTTTTTACAGATCTCTTTTTCGCTTGCATTTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAATTCGTTTTGTTTCAGGTGAGTCATCATAATCGTTTTTTTTTTTCACCCATTTTTGTGTTGATAGTTCTTTCTTTCGTCGTTTCTAATGGATGTGTTGGTGGGGTTTTTTTTTTCTTCAGAACAGTGCATTTGGATTTTAGACAAAAACCTTGGGATTAGGGACCTGAATTTGGAAGATTTAATCTCCAATTTCGTTTCAGTATTGTCGTTTGTTGAGAATTTTTGGTTTTTATTCTTTTTAATATCTGATGATGATCACACTCGAATGGGGTTTTTTATTGGGTTTCTGGGTATCCAATTTGTGCTCTGTGAGATTCGATCTCTGATTCTGCATCAATTTTCTTCTTTTTTTTTTATTTATAATTTTGTGGGTGATCGAAAATTTTCGATTTTTCTGTTACCAGTTCTTGAATTTCGATGAAATTTCAGCTGTTTGGTGATTCCTGCTTGGATGTGAGGAACCATCTCTTTCTCATGGATTTATGTTTTCTCTTCGTCTTCGATCATCTACTCAAGGGTTTTGTTGTGGTTTGTCATCAATTTATTAATTTATAGTTTTTTTCCGGTTAACGAGTAACAACATATCTTTCTTAATATTTTCTCTCTAAAATTCTTTCTGGGTTGGATTTTGAAATTTACTATTACTGCATGTCACTTTATTTCTGATGCTTGTGTAACTCTATTGCATGAGGTTTTACTTTTACCCTTTCTGGAACTCTTCGATTGCTTCATCCCGTCATCACTAAAGATTGTTGAAATTTGGGTTTTAGTTAGATCATCAGCCTCTCTTGAAATTTTAATTATGGGTCATTGCTCCTTATATTTGTTTGTGTGGGTGTGCGTGAATGAGTTTGGTTGGATTGAATAGAAGCATTGGACTTGTGATGTGAAGGCCTGGAATTGCCTCAGGACTTTTGTTTTGATTTGTCTTCCTCGAATGTCGAAGCATGATTCGTCTTTTCAATTTAATTTCTCTAGTTTGTGAGAAGAGATCCAGTTTGAGTTCAGGATACGGCATTCGATCCTTGCTAGTTTGTGTGATTTGATGTTCTTAACCAATAAACTAAATAAAATCTGATTCATTTCTTTTTCTTTTCAGGAATTAATCTGTATTTTGACATTGTGA

mRNA sequence

ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGATCTCTTTTTCGCTTGCATTTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAATTCGTTTTGTTTCAGGAATTAATCTGTATTTTGACATTGTGA

Coding sequence (CDS)

ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGATCTCTTTTTCGCTTGCATTTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAATTCGTTTTGTTTCAGGAATTAATCTGTATTTTGACATTGTGA

Protein sequence

MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL*
Homology
[Close]
BLAST of CsaV3_1G034400 vs. NCBI nr
Match: KGN65735.1 (hypothetical protein Csa_019789 [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 5.6e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL 50
          MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL
Sbjct: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL 49

[Close]
BLAST of CsaV3_1G034400 vs. ExPASy TrEMBL
Match: A0A0A0LUX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523100 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.7e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL 50
          MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL
Sbjct: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL 49

The following BLAST results are available for this feature:
BLAST of CsaV3_1G034400 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65735.15.6e-18100.00hypothetical protein Csa_019789 [Cucumis sativus][more]
BLAST of CsaV3_1G034400 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G034400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUX22.7e-18100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523100 PE=4 SV=1[more]
BLAST of CsaV3_1G034400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G034400.1CsaV3_1G034400.1mRNA