CsaV3_1G033830 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCGTCTGCATATCCGAATGCGTCGACAACGCCTGCATCGTCTCTGCTGCCCGGCCGACGTACGTCAACCTGCAGCGGTGGTCGGAGGAGGAAAAGTGGTCTACAGAGCGCCGCCGTCCAAGGCCGAGAGCGGCTGACGGAATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGGACATCGTTGTCCCTGAGACTACAACTCAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCGGAAGCCAGCGACGATTCGCGGCGGTCGTAGGAGGAGCCGATGTTTGGCCATGGTGAAGGCCGCCGCCAGTCAGGTTTCTTCCGGCGCCTTGCTCTTCTTGTTCCGAAGGTTGCTTTGTTGCGTCGCGAAAGTCGACGGTCGTCGCTCACGGCCGTAAGTGTTTGTGAATTTTGTGAAATCAAAGGTTTCTTTTTTCTTTTTTTTGTCTTCTTTTCAATGAAATAGGCAAATATGAAATAAAGGTAAAGGAAACATAAAATTACAGTCCGTGGAGGGGCACCATGATCACCATCTAG ATGGCCTCCGTCTGCATATCCGAATGCGTCGACAACGCCTGCATCGTCTCTGCTGCCCGGCCGACGTACGTCAACCTGCAGCGGTGGTCGGAGGAGGAAAAGTGGTCTACAGAGCGCCGCCGTCCAAGGCCGAGAGCGGCTGACGGAATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGGACATCGTTGTCCCTGAGACTACAACTCAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCGGAAGCCAGCGACGATTCGCGGCGGTCGTAGGAGGAGCCGATGTTTGGCCATGGTGAAGGCCGCCGCCAGTCAGGTTTCTTCCGGCGCCTTGCTCTTCTTGTTCCGAAGGTTGCTTTGTTGCGTCGCGAAAGTCGACGGTCGTCGCTCACGGCCTCCGTGGAGGGGCACCATGATCACCATCTAG ATGGCCTCCGTCTGCATATCCGAATGCGTCGACAACGCCTGCATCGTCTCTGCTGCCCGGCCGACGTACGTCAACCTGCAGCGGTGGTCGGAGGAGGAAAAGTGGTCTACAGAGCGCCGCCGTCCAAGGCCGAGAGCGGCTGACGGAATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGGACATCGTTGTCCCTGAGACTACAACTCAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCGGAAGCCAGCGACGATTCGCGGCGGTCGTAGGAGGAGCCGATGTTTGGCCATGGTGAAGGCCGCCGCCAGTCAGGTTTCTTCCGGCGCCTTGCTCTTCTTGTTCCGAAGGTTGCTTTGTTGCGTCGCGAAAGTCGACGGTCGTCGCTCACGGCCTCCGTGGAGGGGCACCATGATCACCATCTAG MASVCISECVDNACIVSAARPTYVNLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDIVVPETTTQNCFGKIRRRRRKPATIRGGRRRSRCLAMVKAAASQVSSGALLFLFRRLLCCVAKVDGRRSRPPWRGTMITI* Homology
BLAST of CsaV3_1G033830 vs. NCBI nr
Match: KAE8653233.1 (hypothetical protein Csa_019953 [Cucumis sativus]) HSP 1 Score: 292.4 bits (747), Expect = 2.2e-75 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. NCBI nr
Match: XP_011648508.1 (uncharacterized protein LOC105434501 [Cucumis sativus]) HSP 1 Score: 271.2 bits (692), Expect = 5.4e-69 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. NCBI nr
Match: XP_008457578.1 (PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo] >KAA0033875.1 uncharacterized protein E6C27_scaffold43059G00600 [Cucumis melo var. makuwa] >TYK01259.1 uncharacterized protein E5676_scaffold49G00460 [Cucumis melo var. makuwa]) HSP 1 Score: 241.9 bits (616), Expect = 3.5e-60 Identity = 120/133 (90.23%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. NCBI nr
Match: XP_022970388.1 (uncharacterized protein LOC111469389 [Cucurbita maxima]) HSP 1 Score: 192.2 bits (487), Expect = 3.2e-45 Identity = 99/134 (73.88%), Postives = 113/134 (84.33%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. NCBI nr
Match: XP_023519361.1 (uncharacterized protein LOC111782795 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.8 bits (473), Expect = 1.3e-43 Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. ExPASy TrEMBL
Match: A0A0A0LXY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G497810 PE=4 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 2.6e-69 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. ExPASy TrEMBL
Match: A0A5A7SXG3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00460 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60 Identity = 120/133 (90.23%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. ExPASy TrEMBL
Match: A0A1S3C748 (uncharacterized protein LOC103497245 OS=Cucumis melo OX=3656 GN=LOC103497245 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60 Identity = 120/133 (90.23%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. ExPASy TrEMBL
Match: A0A6J1I3Q2 (uncharacterized protein LOC111469389 OS=Cucurbita maxima OX=3661 GN=LOC111469389 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.5e-45 Identity = 99/134 (73.88%), Postives = 113/134 (84.33%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. ExPASy TrEMBL
Match: A0A6J1HP59 (uncharacterized protein LOC111464745 OS=Cucurbita moschata OX=3662 GN=LOC111464745 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.1e-43 Identity = 97/134 (72.39%), Postives = 111/134 (82.84%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. TAIR 10
Match: AT5G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.6 bits (166), Expect = 4.9e-12 Identity = 58/156 (37.18%), Postives = 76/156 (48.72%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. TAIR 10
Match: AT3G46300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46310.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05 Identity = 47/139 (33.81%), Postives = 64/139 (46.04%), Query Frame = 0
BLAST of CsaV3_1G033830 vs. TAIR 10
Match: AT3G46310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 35 Blast hits to 35 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 2.9e-04 Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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