CsaV3_1G033400 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGGACGTTCTGTTGCTCATCCTTGCGGAGGGTAGGACGAAAATTTGAGAGTAACGGCGACGCTGCAACTTTTCTCAGGTGTGGCAAGTTTCTTAAGCTAAACCCAACAAGTAATTTCATTCTCGTCGTCCATGGAATCCCATTTTTTTTTTAATCTCACTGTTGAAAACAAATGAATGAATCGATGATTTGAATTTCGGTCCCAGGCTGAATTTTCCTCCGTTTCATTCTTTGTGAATCCGAATTTTGCGTAGTGAAATGTTAACATTGTTTCGGTGTTTTCTGGTTCTTGAAATTAGCAGAATAATTGGAGGAAGGGGAGAAGTCGCTCAAATGGTTTGTGTAGGAATTAGGACAGCGGACTTTCTTTTAACCTATAATCTATGATTGTTGATATTCTTTATCATCAAAAGCTTATTTGATCCTCATTGTTGTATAATCAGAGAAGCAATACTTATTTTCTTTCTTGTACTAGAATAAACTGTTGTGTTTAGTGTTGAACCTTGTAACAAAAAGTGATTTCAAATCCTATTATTGTAGTTAACTGTGAGTATTAACATCAACTATTTTAATTGGAAGCTTACCACTGAGTGGACCTTTATAGTCCACTGCCCCAAGTTGAAGTTGGGAGTCTAAACAATCCCCAAGTGCTGATGACTGAGGGTAAATGTATGCGTTTTCAGCCTCTGAGAAGGGAATCCAAATATAGAAAATCATTCCTTTTTTTGATAGCTTATTTTAGTTCAATAGGTGTAGGGGATTTGACCCACAAACATCATAGTCGCTCAATGTTAGTTGAGCTATGTGCACTTTAGCGGCTTACTTGTTTTTCGGGTGGAGGATGGAGAGGTGGGATTCTCTTGCTGTGAAGTTTTGTTTGGTGTGGGTGCTCAATGCTGTTAAGTATTGATATTTTTTAGGGGCAGTAGCTTTTGTAGATCATGATAATAGGCGTCCAATTTATCTCTCAACTTTTGAAAAATTTCTTTATATTCCAGCCGTGATTTGCTCTTGTTTGAATGTTTCAGTGACTTAGCATTATATTTTCACATCTTGTATTGTATAAATGTTTTGAGTTTGGAGTATTACCTATAATAGATTTTGAGGAAGGGAATAAGTATACAAGAAACAGACAACTGAGTACTGCCCCAGATGCAATCTTTCTTGCTGATTGCTCTTTAATCTGTTGTCTGGCAATGTTGCTGAAGTTCTATCTCCATGTTGCCATATCTTCCTATTCTTTTCTCCATTTATTTAACAAAATTTAATCCTTTACCAGTTTATCAGCCATCATTGTCAAGCTACAAACATGAGTGAAGAAAATAACTCAAGTTCAGAATCCGTCTCAAATCCTCAAGTTATGTATCGTTGTAAGAAGTGTCGTAGAATTGTTGCCACGCAGGAGAGTATCATTACCCACGAACGAGGAAAAGGTGAATCATGCTTCAAGTGGAATAAGAGAAGTGGTAATTCACAAGGAATAGAGAACAAGCCAGCTGATTGCACCTCCATATTTGTTGAACCAATGAAATGGATGGAAACCTGTAAGATTAAGCAAATCAAACCCCCTTTTCCTTTCGTCTTCTTTTCAATTAATCTTGCTCGATCGTCGTAAAAATCAACTCATTTCTTCTTTTTGATGAGCAGTGCAAGATGGGCATGTTGAAGAGAAACTTGTGTGTATTGGATGCAAAGCTCGTTTGGGTTCCTTCAACTGGGCTGGAATGCAGTGCAGCTGCGGAGCTTGGGTAAATCCTGCTTTTCAACTTCACAAAGGCAGATTAGATGAATGCCTCATGTGAATAAACTAGAGAGAAAATAAAGTTAACTTGCTAGTTGTTGGTATAGGTCTTGTAAAGGGCTCTTGCTTCTTTTCTTTTCCTAGAACTAGAAATCTAGCAAACTTGATTTAGCAGAATATTGAAAAGTTCAATATTTGATAATTTGAAAACAGAAACCGAAGTTTGGATTGTGGAATAGGGAATGCTGATCATGGGAAAGGAAATTTTGAATATAAGATATTTGAGAATTAACACGGATGCAGTTATTGTGCTGGAAGCCTTAGCCTACGGGGTTCAACCGATCATTCGGACATCAGCAAAGAAACAAGGTGGTTGACCTTTTATTTAAAAAGTTTAATTAAAAATATTATTTTTCCTATACTCAATCCAAACAGACCATTAAAACATCACATTTAGTATGATAAATGTGATGTGAAGATTTGAACAAGC ATGAGTGAAGAAAATAACTCAAGTTCAGAATCCGTCTCAAATCCTCAAGTTATGTATCGTTGTAAGAAGTGTCGTAGAATTGTTGCCACGCAGGAGAGTATCATTACCCACGAACGAGGAAAAGGTGAATCATGCTTCAAGTGGAATAAGAGAAGTGGTAATTCACAAGGAATAGAGAACAAGCCAGCTGATTGCACCTCCATATTTGTTGAACCAATGAAATGGATGGAAACCTTGCAAGATGGGCATGTTGAAGAGAAACTTGTGTGTATTGGATGCAAAGCTCGTTTGGGTTCCTTCAACTGGGCTGGAATGCAGTGCAGCTGCGGAGCTTGGAAACCGAAGTTTGGATTGTGGAATAGGGAATGCTGA ATGAGTGAAGAAAATAACTCAAGTTCAGAATCCGTCTCAAATCCTCAAGTTATGTATCGTTGTAAGAAGTGTCGTAGAATTGTTGCCACGCAGGAGAGTATCATTACCCACGAACGAGGAAAAGGTGAATCATGCTTCAAGTGGAATAAGAGAAGTGGTAATTCACAAGGAATAGAGAACAAGCCAGCTGATTGCACCTCCATATTTGTTGAACCAATGAAATGGATGGAAACCTTGCAAGATGGGCATGTTGAAGAGAAACTTGTGTGTATTGGATGCAAAGCTCGTTTGGGTTCCTTCAACTGGGCTGGAATGCAGTGCAGCTGCGGAGCTTGGAAACCGAAGTTTGGATTGTGGAATAGGGAATGCTGA MSEENNSSSESVSNPQVMYRCKKCRRIVATQESIITHERGKGESCFKWNKRSGNSQGIENKPADCTSIFVEPMKWMETLQDGHVEEKLVCIGCKARLGSFNWAGMQCSCGAWKPKFGLWNREC* Homology
BLAST of CsaV3_1G033400 vs. NCBI nr
Match: KAE8653219.1 (hypothetical protein Csa_019710 [Cucumis sativus]) HSP 1 Score: 269.2 bits (687), Expect = 1.7e-68 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. NCBI nr
Match: XP_011657797.1 (probable inactive dual specificity protein phosphatase-like At4g18593 [Cucumis sativus]) HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60 Identity = 115/119 (96.64%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. NCBI nr
Match: XP_008443127.1 (PREDICTED: probable inactive dual specificity protein phosphatase-like At4g18593 [Cucumis melo] >KAA0057032.1 putative inactive dual specificity protein phosphatase-like [Cucumis melo var. makuwa]) HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58 Identity = 111/119 (93.28%), Postives = 113/119 (94.96%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. NCBI nr
Match: XP_038893904.1 (probable inactive dual specificity protein phosphatase-like At4g18593 [Benincasa hispida]) HSP 1 Score: 231.1 bits (588), Expect = 5.2e-57 Identity = 107/119 (89.92%), Postives = 113/119 (94.96%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. NCBI nr
Match: XP_022139849.1 (probable inactive dual specificity protein phosphatase-like At4g18593 [Momordica charantia]) HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53 Identity = 102/119 (85.71%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. ExPASy Swiss-Prot
Match: Q570P7 (Probable inactive dual specificity protein phosphatase-like At4g18593 OS=Arabidopsis thaliana OX=3702 GN=At4g18593 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 4.1e-41 Identity = 77/117 (65.81%), Postives = 90/117 (76.92%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. ExPASy Swiss-Prot
Match: Q9UNI6 (Dual specificity protein phosphatase 12 OS=Homo sapiens OX=9606 GN=DUSP12 PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20 Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. ExPASy Swiss-Prot
Match: Q9D0T2 (Dual specificity protein phosphatase 12 OS=Mus musculus OX=10090 GN=Dusp12 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 6.9e-20 Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. ExPASy Swiss-Prot
Match: Q9JIM4 (Dual specificity protein phosphatase 12 OS=Rattus norvegicus OX=10116 GN=Dusp12 PE=1 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 9.0e-20 Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. ExPASy Swiss-Prot
Match: Q54T76 (Probable dual specificity protein phosphatase DDB_G0281963 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0281963 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.0e-15 Identity = 42/122 (34.43%), Postives = 67/122 (54.92%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. ExPASy TrEMBL
Match: A0A0A0LV56 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G477530 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. ExPASy TrEMBL
Match: A0A5A7UMF2 (Putative inactive dual specificity protein phosphatase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002180 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 6.0e-59 Identity = 111/119 (93.28%), Postives = 113/119 (94.96%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. ExPASy TrEMBL
Match: A0A1S3B7A6 (probable inactive dual specificity protein phosphatase-like At4g18593 OS=Cucumis melo OX=3656 GN=LOC103486809 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 6.0e-59 Identity = 111/119 (93.28%), Postives = 113/119 (94.96%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. ExPASy TrEMBL
Match: A0A6J1CE42 (probable inactive dual specificity protein phosphatase-like At4g18593 OS=Momordica charantia OX=3673 GN=LOC111010661 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 5.8e-54 Identity = 102/119 (85.71%), Postives = 109/119 (91.60%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. ExPASy TrEMBL
Match: A0A6J1GSH2 (probable inactive dual specificity protein phosphatase-like At4g18593 OS=Cucurbita moschata OX=3662 GN=LOC111457110 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52 Identity = 101/119 (84.87%), Postives = 108/119 (90.76%), Query Frame = 0
BLAST of CsaV3_1G033400 vs. TAIR 10
Match: AT4G18593.1 (dual specificity protein phosphatase-related ) HSP 1 Score: 168.7 bits (426), Expect = 2.9e-42 Identity = 77/117 (65.81%), Postives = 90/117 (76.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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