CsaV3_1G033170 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G033170
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein DOT4
Locationchr1: 20203982 .. 20205051 (-)
RNA-Seq ExpressionCsaV3_1G033170
SyntenyCsaV3_1G033170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTACTGGCAGCAAAAGCCCCTATAACCTTTTGGCTATCTCCGGCCGGGAACGATCATCGTGGCTCCGTGAACTTGAAATTCCGGCAATCTTTTCTTTTTGTCATACCCAGTTCGAAACTTTCCTTTTCAAGTTTGGCTTATGCCCCAGCATTGGAAACGAAAAGCTATATGGATGTTGAACTGGATAGTTCCCGCAAAATTGTCGAGTTTTGTGAAGTGGGGGATCTCAAAAACGCCATGGAGCTTCTTTGCAGTTCCCAAAATTCCAACTTTGACTTGGGTGCTTATTGCTCCATCTTGCAGCTATGTGCTGAACGAAAATCTATACGAGATGGAAGAAGGGTTCGTTCAATAATAGAATCTAGTGGGGTTATGATAGATGGAATCTTGGGGGTGAAACTAGTTTTTATGTATGTTAAATGTGGGGATCTAAAAGAAGGGAGGATGGTTTTTGATAAACTTTCTGAAAGTAAGATTTTTCTCTGGAACCTTATGATCAGTGAGTATTCAGGAAGTGGTAACTATGGAGAGAGTATAAATTTGTTCAAGCAAATGCTGGAGTTGGGAATAAAACCTAATTCATATACATTTTCTAGTATTTTGAAGTGTTTCGCAGCAGTTGCACGTGTAGAAGAGGGTAGGCAGGTTCATGGGTTGATCTGTAAATTGGGTTTTAATTCTTATAACACAGTCGTTAATTCATTAATTTCTTTCTACTTTGTTGGTAGAAAGGTTAGATGTGCACAGAAGCTGTTCGATGAATTGACTGACCGAGATGTCATTTCATGGAACTCTATGATCAGTGGCTATGTTAAGAATGGTTTAGATGACAGAGGAATTGAGATTTTCATAAAGATGTTGGTTTTCGGTGTTGATATTGATTTGGCTACAATGGTTAATGTGTTTGTAGCTTGTGCAAATATAGGCACTCTTTTGTTGGGTAAGGTACTTCATTCTTATTCAATAAAGGCTGCTACTCTTGACAGAGAAGTTAGGTTCAATAATACTTTATTGGACATGTACTCAAAATGTGGGGATTTGAACAGTGCCATCCGGGTTTTTGA

mRNA sequence

ATGATGTTACTGGCAGCAAAAGCCCCTATAACCTTTTGGCTATCTCCGGCCGGGAACGATCATCGTGGCTCCGTGAACTTGAAATTCCGGCAATCTTTTCTTTTTGTCATACCCAGTTCGAAACTTTCCTTTTCAAGTTTGGCTTATGCCCCAGCATTGGAAACGAAAAGCTATATGGATGTTGAACTGGATAGTTCCCGCAAAATTGTCGAGTTTTGTGAAGTGGGGGATCTCAAAAACGCCATGGAGCTTCTTTGCAGTTCCCAAAATTCCAACTTTGACTTGGGTGCTTATTGCTCCATCTTGCAGCTATGTGCTGAACGAAAATCTATACGAGATGGAAGAAGGGTTCGTTCAATAATAGAATCTAGTGGGGTTATGATAGATGGAATCTTGGGGGTGAAACTAGTTTTTATGTATGTTAAATGTGGGGATCTAAAAGAAGGGAGGATGGTTTTTGATAAACTTTCTGAAAGTAAGATTTTTCTCTGGAACCTTATGATCAGTGAGTATTCAGGAAGTGGTAACTATGGAGAGAGTATAAATTTGTTCAAGCAAATGCTGGAGTTGGGAATAAAACCTAATTCATATACATTTTCTAGTATTTTGAAGTGTTTCGCAGCAGTTGCACGTGTAGAAGAGGGTAGGCAGGTTCATGGGTTGATCTGTAAATTGGGTTTTAATTCTTATAACACAGTCGTTAATTCATTAATTTCTTTCTACTTTGTTGGTAGAAAGGTTAGATGTGCACAGAAGCTGTTCGATGAATTGACTGACCGAGATGTCATTTCATGGAACTCTATGATCAGTGGCTATGTTAAGAATGGTTTAGATGACAGAGGAATTGAGATTTTCATAAAGATGTTGGTTTTCGGTGTTGATATTGATTTGGCTACAATGGTTAATGTGTTTGTAGCTTGTGCAAATATAGGCACTCTTTTGTTGGGTAAGTGCCATCCGGGTTTTTGA

Coding sequence (CDS)

ATGATGTTACTGGCAGCAAAAGCCCCTATAACCTTTTGGCTATCTCCGGCCGGGAACGATCATCGTGGCTCCGTGAACTTGAAATTCCGGCAATCTTTTCTTTTTGTCATACCCAGTTCGAAACTTTCCTTTTCAAGTTTGGCTTATGCCCCAGCATTGGAAACGAAAAGCTATATGGATGTTGAACTGGATAGTTCCCGCAAAATTGTCGAGTTTTGTGAAGTGGGGGATCTCAAAAACGCCATGGAGCTTCTTTGCAGTTCCCAAAATTCCAACTTTGACTTGGGTGCTTATTGCTCCATCTTGCAGCTATGTGCTGAACGAAAATCTATACGAGATGGAAGAAGGGTTCGTTCAATAATAGAATCTAGTGGGGTTATGATAGATGGAATCTTGGGGGTGAAACTAGTTTTTATGTATGTTAAATGTGGGGATCTAAAAGAAGGGAGGATGGTTTTTGATAAACTTTCTGAAAGTAAGATTTTTCTCTGGAACCTTATGATCAGTGAGTATTCAGGAAGTGGTAACTATGGAGAGAGTATAAATTTGTTCAAGCAAATGCTGGAGTTGGGAATAAAACCTAATTCATATACATTTTCTAGTATTTTGAAGTGTTTCGCAGCAGTTGCACGTGTAGAAGAGGGTAGGCAGGTTCATGGGTTGATCTGTAAATTGGGTTTTAATTCTTATAACACAGTCGTTAATTCATTAATTTCTTTCTACTTTGTTGGTAGAAAGGTTAGATGTGCACAGAAGCTGTTCGATGAATTGACTGACCGAGATGTCATTTCATGGAACTCTATGATCAGTGGCTATGTTAAGAATGGTTTAGATGACAGAGGAATTGAGATTTTCATAAAGATGTTGGTTTTCGGTGTTGATATTGATTTGGCTACAATGGTTAATGTGTTTGTAGCTTGTGCAAATATAGGCACTCTTTTGTTGGGTAAGTGCCATCCGGGTTTTTGA

Protein sequence

MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKCHPGF*
Homology
BLAST of CsaV3_1G033170 vs. NCBI nr
Match: KGN65968.2 (hypothetical protein Csa_019583 [Cucumis sativus])

HSP 1 Score: 643.3 bits (1658), Expect = 1.1e-180
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0

Query: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD 60
           MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD
Sbjct: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD 60

Query: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI 120
           VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI
Sbjct: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI 120

Query: 121 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 180
           IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES
Sbjct: 121 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 180

Query: 181 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 240
           INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF
Sbjct: 181 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 240

Query: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 300
           YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
Sbjct: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 300

Query: 301 VNVFVACANIGTLLLGKCHPGF 323
           VNVFVACANIGTLLLGKCHPGF
Sbjct: 301 VNVFVACANIGTLLLGKCHPGF 322

BLAST of CsaV3_1G033170 vs. NCBI nr
Match: XP_011657608.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic [Cucumis sativus])

HSP 1 Score: 629.0 bits (1621), Expect = 2.2e-176
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0

Query: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD 60
           MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD
Sbjct: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD 60

Query: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI 120
           VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI
Sbjct: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI 120

Query: 121 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 180
           IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES
Sbjct: 121 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 180

Query: 181 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 240
           INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF
Sbjct: 181 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 240

Query: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 300
           YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
Sbjct: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 300

Query: 301 VNVFVACANIGTLLLGK 318
           VNVFVACANIGTLLLGK
Sbjct: 301 VNVFVACANIGTLLLGK 317

BLAST of CsaV3_1G033170 vs. NCBI nr
Match: KAA0057054.1 (pentatricopeptide repeat-containing protein DOT4 [Cucumis melo var. makuwa])

HSP 1 Score: 590.9 bits (1522), Expect = 6.7e-165
Identity = 293/317 (92.43%), Postives = 306/317 (96.53%), Query Frame = 0

Query: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD 60
           MMLL AKAP+TFWLSPAG+DHRGSVNLKFRQSFLF  P+SKLSFSSLAYAPA+ETKSYMD
Sbjct: 1   MMLLTAKAPVTFWLSPAGHDHRGSVNLKFRQSFLFAKPNSKLSFSSLAYAPAMETKSYMD 60

Query: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI 120
           VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDL A+CSILQLCAERKSIRDGRRV SI
Sbjct: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLDAFCSILQLCAERKSIRDGRRVHSI 120

Query: 121 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 180
           IESSGV+IDGILGVKLVFMYVKCGDLKEGRM+FDKLSESK+F+WNLMISEY G+GNYGES
Sbjct: 121 IESSGVIIDGILGVKLVFMYVKCGDLKEGRMIFDKLSESKVFIWNLMISEYLGNGNYGES 180

Query: 181 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 240
           INLFKQMLELGIKPNSYTFSS+LKCFAAVA VEEGRQVHGLI KLG+NSYNTVVNSLISF
Sbjct: 181 INLFKQMLELGIKPNSYTFSSVLKCFAAVASVEEGRQVHGLIYKLGYNSYNTVVNSLISF 240

Query: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 300
           YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV+IDLATM
Sbjct: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVEIDLATM 300

Query: 301 VNVFVACANIGTLLLGK 318
           VNV VACAN GTLL GK
Sbjct: 301 VNVLVACANTGTLLFGK 317

BLAST of CsaV3_1G033170 vs. NCBI nr
Match: XP_008443463.1 (PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic [Cucumis melo])

HSP 1 Score: 590.9 bits (1522), Expect = 6.7e-165
Identity = 293/317 (92.43%), Postives = 306/317 (96.53%), Query Frame = 0

Query: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD 60
           MMLL AKAP+TFWLSPAG+DHRGSVNLKFRQSFLF  P+SKLSFSSLAYAPA+ETKSYMD
Sbjct: 1   MMLLTAKAPVTFWLSPAGHDHRGSVNLKFRQSFLFAKPNSKLSFSSLAYAPAMETKSYMD 60

Query: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI 120
           VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDL A+CSILQLCAERKSIRDGRRV SI
Sbjct: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLDAFCSILQLCAERKSIRDGRRVHSI 120

Query: 121 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 180
           IESSGV+IDGILGVKLVFMYVKCGDLKEGRM+FDKLSESK+F+WNLMISEY G+GNYGES
Sbjct: 121 IESSGVIIDGILGVKLVFMYVKCGDLKEGRMIFDKLSESKVFIWNLMISEYLGNGNYGES 180

Query: 181 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 240
           INLFKQMLELGIKPNSYTFSS+LKCFAAVA VEEGRQVHGLI KLG+NSYNTVVNSLISF
Sbjct: 181 INLFKQMLELGIKPNSYTFSSVLKCFAAVASVEEGRQVHGLIYKLGYNSYNTVVNSLISF 240

Query: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 300
           YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV+IDLATM
Sbjct: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVEIDLATM 300

Query: 301 VNVFVACANIGTLLLGK 318
           VNV VACAN GTLL GK
Sbjct: 301 VNVLVACANTGTLLFGK 317

BLAST of CsaV3_1G033170 vs. NCBI nr
Match: XP_038893908.1 (pentatricopeptide repeat-containing protein DOT4, chloroplastic [Benincasa hispida])

HSP 1 Score: 543.1 bits (1398), Expect = 1.6e-150
Identity = 273/324 (84.26%), Postives = 293/324 (90.43%), Query Frame = 0

Query: 2   MLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLA------YAPALET 61
           MLL AK P TFWLSP G DHRG ++LKFRQSF+FV P+SK SFS+ A      Y PALET
Sbjct: 1   MLLVAKPPTTFWLSPVGYDHRGLLSLKFRQSFVFVKPNSKFSFSNSAHACTEGYTPALET 60

Query: 62  --KSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRD 121
             KSY+DVELD+S KIVEFCE+GDLKNAMELLC SQNS FDL  YCSILQLCAE+KSIRD
Sbjct: 61  KRKSYIDVELDNSHKIVEFCEMGDLKNAMELLCGSQNSYFDLDTYCSILQLCAEQKSIRD 120

Query: 122 GRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSG 181
           GRRV SIIES+GVMIDGILGVKLVFMYVKCGDLKEGR++FDKLSE+K+FLWNLMISEYSG
Sbjct: 121 GRRVHSIIESNGVMIDGILGVKLVFMYVKCGDLKEGRVIFDKLSENKVFLWNLMISEYSG 180

Query: 182 SGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTV 241
           +GNYGESINLFKQMLELGIKPNSYTFSS+LKC AAVARVEEGRQVHGLICKLGFNSYNTV
Sbjct: 181 NGNYGESINLFKQMLELGIKPNSYTFSSVLKCLAAVARVEEGRQVHGLICKLGFNSYNTV 240

Query: 242 VNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV 301
           VNSLISFYFV RKVR AQKLFDELTDRDVISWNSMISGYVKNGL+D+GIEIFIKML F +
Sbjct: 241 VNSLISFYFVSRKVRDAQKLFDELTDRDVISWNSMISGYVKNGLEDKGIEIFIKMLAFSI 300

Query: 302 DIDLATMVNVFVACANIGTLLLGK 318
           D DLATMVNV VACAN+GTLLLGK
Sbjct: 301 DFDLATMVNVLVACANMGTLLLGK 324

BLAST of CsaV3_1G033170 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 7.9e-68
Identity = 120/254 (47.24%), Postives = 180/254 (70.87%), Query Frame = 0

Query: 64  DSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIES 123
           D++ ++  FCE G+L+NA++LLC S   + D    CS+LQLCA+ KS++DG+ V + I  
Sbjct: 63  DANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122

Query: 124 SGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINL 183
           +G +ID  LG KL  MY  CGDLKE   VFD++   K   WN++++E + SG++  SI L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182

Query: 184 FKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFV 243
           FK+M+  G++ +SYTFS + K F+++  V  G Q+HG I K GF   N+V NSL++FY  
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242

Query: 244 GRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNV 303
            ++V  A+K+FDE+T+RDVISWNS+I+GYV NGL ++G+ +F++MLV G++IDLAT+V+V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302

Query: 304 FVACANIGTLLLGK 318
           F  CA+   + LG+
Sbjct: 303 FAGCADSRLISLGR 316

BLAST of CsaV3_1G033170 vs. ExPASy Swiss-Prot
Match: Q9M9E2 (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.8e-38
Identity = 89/256 (34.77%), Postives = 148/256 (57.81%), Query Frame = 0

Query: 65  SSRKIVEFCEVGDLKNAMELLCSSQNSN--FDLGAYCSILQLCAERKSIRDGRRVRSIIE 124
           S+ ++   C  G L+ AM+LL S Q      D   + ++++LC  +++  +G +V SI  
Sbjct: 62  SNSQLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL 121

Query: 125 SSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESIN 184
           SS   +   LG   + M+V+ G+L +   VF K+SE  +F WN+++  Y+  G + E++ 
Sbjct: 122 SSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMC 181

Query: 185 LFKQMLEL-GIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFY 244
           L+ +ML + G+KP+ YTF  +L+    +  +  G++VH  + + G+     VVN+LI+ Y
Sbjct: 182 LYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241

Query: 245 FVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMV 304
                V+ A+ LFD +  RD+ISWN+MISGY +NG+   G+E+F  M    VD DL T+ 
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301

Query: 305 NVFVACANIGTLLLGK 318
           +V  AC  +G   LG+
Sbjct: 302 SVISACELLGDRRLGR 317

BLAST of CsaV3_1G033170 vs. ExPASy Swiss-Prot
Match: Q9LIC3 (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.2e-32
Identity = 75/254 (29.53%), Postives = 142/254 (55.91%), Query Frame = 0

Query: 69  IVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMI 128
           I + C  G L+ A+ L  +          Y ++L  C +++++RDG+RV + +  +  + 
Sbjct: 27  ISQLCSNGRLQEAL-LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLP 86

Query: 129 DGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQML 188
              L  +L+  Y KC  L++ R V D++ E  +  W  MIS YS +G+  E++ +F +M+
Sbjct: 87  ATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMM 146

Query: 189 ELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVR 248
               KPN +TF+++L      + +  G+Q+HGLI K  ++S+  V +SL+  Y    +++
Sbjct: 147 RSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIK 206

Query: 249 CAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACA 308
            A+++F+ L +RDV+S  ++I+GY + GLD+  +E+F ++   G+  +  T  ++  A +
Sbjct: 207 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 266

Query: 309 NIGTLLLGK---CH 320
            +  L  GK   CH
Sbjct: 267 GLALLDHGKQAHCH 279

BLAST of CsaV3_1G033170 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.0e-32
Identity = 74/248 (29.84%), Postives = 130/248 (52.42%), Query Frame = 0

Query: 72  FCEVGDLKNAMELLCSSQNSNFDLGAY--CSILQLCAERKSIRDGRRVRSIIESSGVMID 131
           F +V DL  A++     +  + +   Y    +L++C +   +R G+ +  ++  SG  +D
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD 169

Query: 132 GILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLE 191
                 L  MY KC  + E R VFD++ E  +  WN +++ YS +G    ++ + K M E
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229

Query: 192 LGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRC 251
             +KP+  T  S+L   +A+  +  G+++HG   + GF+S   +  +L+  Y     +  
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET 289

Query: 252 AQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACAN 311
           A++LFD + +R+V+SWNSMI  YV+N      + IF KML  GV     +++    ACA+
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349

Query: 312 IGTLLLGK 318
           +G L  G+
Sbjct: 350 LGDLERGR 357

BLAST of CsaV3_1G033170 vs. ExPASy Swiss-Prot
Match: Q9ZQ74 (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.6e-31
Identity = 71/219 (32.42%), Postives = 127/219 (57.99%), Query Frame = 0

Query: 98  YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 157
           Y +++  C +  ++  G+     +  SG+ +   L   L+ MYVKCGD+   R VF++ S
Sbjct: 245 YGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS 304

Query: 158 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQ 217
              + +W  MI  Y+ +G+  E+++LF++M  + IKPN  T +S+L     +  +E GR 
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364

Query: 218 VHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGL 277
           VHGL  K+G    N V N+L+  Y    + R A+ +F+  +++D+++WNS+ISG+ +NG 
Sbjct: 365 VHGLSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS 424

Query: 278 DDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLG 317
               + +F +M    V  +  T+ ++F ACA++G+L +G
Sbjct: 425 IHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462

BLAST of CsaV3_1G033170 vs. ExPASy TrEMBL
Match: A0A0A0LV30 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G470290 PE=3 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 1.1e-176
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0

Query: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD 60
           MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD
Sbjct: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD 60

Query: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI 120
           VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI
Sbjct: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI 120

Query: 121 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 180
           IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES
Sbjct: 121 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 180

Query: 181 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 240
           INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF
Sbjct: 181 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 240

Query: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 300
           YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM
Sbjct: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 300

Query: 301 VNVFVACANIGTLLLGK 318
           VNVFVACANIGTLLLGK
Sbjct: 301 VNVFVACANIGTLLLGK 317

BLAST of CsaV3_1G033170 vs. ExPASy TrEMBL
Match: A0A5A7UPC9 (Pentatricopeptide repeat-containing protein DOT4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002420 PE=3 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.3e-165
Identity = 293/317 (92.43%), Postives = 306/317 (96.53%), Query Frame = 0

Query: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD 60
           MMLL AKAP+TFWLSPAG+DHRGSVNLKFRQSFLF  P+SKLSFSSLAYAPA+ETKSYMD
Sbjct: 1   MMLLTAKAPVTFWLSPAGHDHRGSVNLKFRQSFLFAKPNSKLSFSSLAYAPAMETKSYMD 60

Query: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI 120
           VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDL A+CSILQLCAERKSIRDGRRV SI
Sbjct: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLDAFCSILQLCAERKSIRDGRRVHSI 120

Query: 121 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 180
           IESSGV+IDGILGVKLVFMYVKCGDLKEGRM+FDKLSESK+F+WNLMISEY G+GNYGES
Sbjct: 121 IESSGVIIDGILGVKLVFMYVKCGDLKEGRMIFDKLSESKVFIWNLMISEYLGNGNYGES 180

Query: 181 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 240
           INLFKQMLELGIKPNSYTFSS+LKCFAAVA VEEGRQVHGLI KLG+NSYNTVVNSLISF
Sbjct: 181 INLFKQMLELGIKPNSYTFSSVLKCFAAVASVEEGRQVHGLIYKLGYNSYNTVVNSLISF 240

Query: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 300
           YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV+IDLATM
Sbjct: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVEIDLATM 300

Query: 301 VNVFVACANIGTLLLGK 318
           VNV VACAN GTLL GK
Sbjct: 301 VNVLVACANTGTLLFGK 317

BLAST of CsaV3_1G033170 vs. ExPASy TrEMBL
Match: A0A1S3B857 (pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487046 PE=3 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.3e-165
Identity = 293/317 (92.43%), Postives = 306/317 (96.53%), Query Frame = 0

Query: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYAPALETKSYMD 60
           MMLL AKAP+TFWLSPAG+DHRGSVNLKFRQSFLF  P+SKLSFSSLAYAPA+ETKSYMD
Sbjct: 1   MMLLTAKAPVTFWLSPAGHDHRGSVNLKFRQSFLFAKPNSKLSFSSLAYAPAMETKSYMD 60

Query: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSI 120
           VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDL A+CSILQLCAERKSIRDGRRV SI
Sbjct: 61  VELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLDAFCSILQLCAERKSIRDGRRVHSI 120

Query: 121 IESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGES 180
           IESSGV+IDGILGVKLVFMYVKCGDLKEGRM+FDKLSESK+F+WNLMISEY G+GNYGES
Sbjct: 121 IESSGVIIDGILGVKLVFMYVKCGDLKEGRMIFDKLSESKVFIWNLMISEYLGNGNYGES 180

Query: 181 INLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISF 240
           INLFKQMLELGIKPNSYTFSS+LKCFAAVA VEEGRQVHGLI KLG+NSYNTVVNSLISF
Sbjct: 181 INLFKQMLELGIKPNSYTFSSVLKCFAAVASVEEGRQVHGLIYKLGYNSYNTVVNSLISF 240

Query: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATM 300
           YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV+IDLATM
Sbjct: 241 YFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVEIDLATM 300

Query: 301 VNVFVACANIGTLLLGK 318
           VNV VACAN GTLL GK
Sbjct: 301 VNVLVACANTGTLLFGK 317

BLAST of CsaV3_1G033170 vs. ExPASy TrEMBL
Match: A0A6J1KNK7 (pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495126 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 6.4e-145
Identity = 262/324 (80.86%), Postives = 287/324 (88.58%), Query Frame = 0

Query: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYA-------PAL 60
           M LL AKAP TFWLS AG DHRG VNLKFRQS  FV P+S+ SFS+ AYA        AL
Sbjct: 1   MFLLVAKAPPTFWLSSAGYDHRGLVNLKFRQSSAFVKPNSQSSFSNSAYASTESYTPAAL 60

Query: 61  ETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRD 120
           E K+Y+D EL++SRKIV+FCEVGDLKNA+ELLCSSQNSN DL  YC ILQLCAE+KSIRD
Sbjct: 61  EAKNYIDAELNNSRKIVKFCEVGDLKNAIELLCSSQNSNLDLDTYCIILQLCAEQKSIRD 120

Query: 121 GRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSG 180
           GRRV SIIES+ V+IDGILG KLVFMYVKCGDL+EGRM+FDKLSE K+FLWNLMISEYSG
Sbjct: 121 GRRVHSIIESNEVVIDGILGAKLVFMYVKCGDLREGRMIFDKLSEKKVFLWNLMISEYSG 180

Query: 181 SGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTV 240
           SGNYGESINLFK+MLELGI PNSYTFSS+LKCFAAV RVEEGRQVHGLICKLGF SYN V
Sbjct: 181 SGNYGESINLFKRMLELGINPNSYTFSSVLKCFAAVVRVEEGRQVHGLICKLGFTSYNAV 240

Query: 241 VNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV 300
           VNSLISFYFVGRKVR A+KLFDE++DRDVISWNSMISGYVKNGL+DRGIEIF++MLVF V
Sbjct: 241 VNSLISFYFVGRKVRSARKLFDEMSDRDVISWNSMISGYVKNGLEDRGIEIFLRMLVFSV 300

Query: 301 DIDLATMVNVFVACANIGTLLLGK 318
           D+DLATMVNV VACAN+GTL LGK
Sbjct: 301 DVDLATMVNVLVACANMGTLSLGK 324

BLAST of CsaV3_1G033170 vs. ExPASy TrEMBL
Match: A0A6J1EHU9 (pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434304 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.4e-144
Identity = 262/324 (80.86%), Postives = 288/324 (88.89%), Query Frame = 0

Query: 1   MMLLAAKAPITFWLSPAGNDHRGSVNLKFRQSFLFVIPSSKLSFSSLAYA-------PAL 60
           M LL AKAP TFWLS AG DHRG VNLKFRQS  FV P+S+ SFS+ A+A        AL
Sbjct: 1   MFLLVAKAPPTFWLSSAGYDHRGLVNLKFRQSSAFVKPNSQSSFSNSAHASTESYTPTAL 60

Query: 61  ETKSYMDVELDSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRD 120
           E K+Y+DVEL++SRKIV+FCEVGDLKNA+ELLCSSQNSN DL  YC ILQLCAE+KSIRD
Sbjct: 61  EAKNYIDVELNNSRKIVKFCEVGDLKNAIELLCSSQNSNLDLDTYCVILQLCAEQKSIRD 120

Query: 121 GRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSG 180
           GRRV SIIES+ V+IDGILG KLVFMYVKCGDL+EGRM+FDKLSE K+FLWNLMISEYSG
Sbjct: 121 GRRVHSIIESNEVVIDGILGAKLVFMYVKCGDLREGRMIFDKLSEKKVFLWNLMISEYSG 180

Query: 181 SGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTV 240
           SGNYGESINLFK+MLELGI PNSYTFSS+LKCFAAVARVEEG QVHGLICKLGF SYN V
Sbjct: 181 SGNYGESINLFKRMLELGINPNSYTFSSVLKCFAAVARVEEGMQVHGLICKLGFTSYNAV 240

Query: 241 VNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV 300
           VNSLISFYFVGRKVR A+KLFDE++DRDVISWNSMISGYVKNGL+DRGIEIF++MLVF V
Sbjct: 241 VNSLISFYFVGRKVRSARKLFDEMSDRDVISWNSMISGYVKNGLEDRGIEIFLRMLVFSV 300

Query: 301 DIDLATMVNVFVACANIGTLLLGK 318
           D+DLATMVNV VACAN+GTL LGK
Sbjct: 301 DVDLATMVNVLVACANMGTLSLGK 324

BLAST of CsaV3_1G033170 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 258.8 bits (660), Expect = 5.6e-69
Identity = 120/254 (47.24%), Postives = 180/254 (70.87%), Query Frame = 0

Query: 64  DSSRKIVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIES 123
           D++ ++  FCE G+L+NA++LLC S   + D    CS+LQLCA+ KS++DG+ V + I  
Sbjct: 63  DANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122

Query: 124 SGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINL 183
           +G +ID  LG KL  MY  CGDLKE   VFD++   K   WN++++E + SG++  SI L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182

Query: 184 FKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFV 243
           FK+M+  G++ +SYTFS + K F+++  V  G Q+HG I K GF   N+V NSL++FY  
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242

Query: 244 GRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNV 303
            ++V  A+K+FDE+T+RDVISWNS+I+GYV NGL ++G+ +F++MLV G++IDLAT+V+V
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302

Query: 304 FVACANIGTLLLGK 318
           F  CA+   + LG+
Sbjct: 303 FAGCADSRLISLGR 316

BLAST of CsaV3_1G033170 vs. TAIR 10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 2.7e-39
Identity = 89/256 (34.77%), Postives = 148/256 (57.81%), Query Frame = 0

Query: 65  SSRKIVEFCEVGDLKNAMELLCSSQNSN--FDLGAYCSILQLCAERKSIRDGRRVRSIIE 124
           S+ ++   C  G L+ AM+LL S Q      D   + ++++LC  +++  +G +V SI  
Sbjct: 62  SNSQLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL 121

Query: 125 SSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESIN 184
           SS   +   LG   + M+V+ G+L +   VF K+SE  +F WN+++  Y+  G + E++ 
Sbjct: 122 SSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMC 181

Query: 185 LFKQMLEL-GIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFY 244
           L+ +ML + G+KP+ YTF  +L+    +  +  G++VH  + + G+     VVN+LI+ Y
Sbjct: 182 LYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241

Query: 245 FVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMV 304
                V+ A+ LFD +  RD+ISWN+MISGY +NG+   G+E+F  M    VD DL T+ 
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLT 301

Query: 305 NVFVACANIGTLLLGK 318
           +V  AC  +G   LG+
Sbjct: 302 SVISACELLGDRRLGR 317

BLAST of CsaV3_1G033170 vs. TAIR 10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 2.2e-33
Identity = 75/254 (29.53%), Postives = 142/254 (55.91%), Query Frame = 0

Query: 69  IVEFCEVGDLKNAMELLCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMI 128
           I + C  G L+ A+ L  +          Y ++L  C +++++RDG+RV + +  +  + 
Sbjct: 27  ISQLCSNGRLQEAL-LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLP 86

Query: 129 DGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQML 188
              L  +L+  Y KC  L++ R V D++ E  +  W  MIS YS +G+  E++ +F +M+
Sbjct: 87  ATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMM 146

Query: 189 ELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVR 248
               KPN +TF+++L      + +  G+Q+HGLI K  ++S+  V +SL+  Y    +++
Sbjct: 147 RSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIK 206

Query: 249 CAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACA 308
            A+++F+ L +RDV+S  ++I+GY + GLD+  +E+F ++   G+  +  T  ++  A +
Sbjct: 207 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 266

Query: 309 NIGTLLLGK---CH 320
            +  L  GK   CH
Sbjct: 267 GLALLDHGKQAHCH 279

BLAST of CsaV3_1G033170 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 5.0e-33
Identity = 74/248 (29.84%), Postives = 130/248 (52.42%), Query Frame = 0

Query: 72  FCEVGDLKNAMELLCSSQNSNFDLGAY--CSILQLCAERKSIRDGRRVRSIIESSGVMID 131
           F +V DL  A++     +  + +   Y    +L++C +   +R G+ +  ++  SG  +D
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD 169

Query: 132 GILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLE 191
                 L  MY KC  + E R VFD++ E  +  WN +++ YS +G    ++ + K M E
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229

Query: 192 LGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRC 251
             +KP+  T  S+L   +A+  +  G+++HG   + GF+S   +  +L+  Y     +  
Sbjct: 230 ENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLET 289

Query: 252 AQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACAN 311
           A++LFD + +R+V+SWNSMI  YV+N      + IF KML  GV     +++    ACA+
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349

Query: 312 IGTLLLGK 318
           +G L  G+
Sbjct: 350 LGDLERGR 357

BLAST of CsaV3_1G033170 vs. TAIR 10
Match: AT2G03380.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 1.1e-32
Identity = 71/219 (32.42%), Postives = 127/219 (57.99%), Query Frame = 0

Query: 98  YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 157
           Y +++  C +  ++  G+     +  SG+ +   L   L+ MYVKCGD+   R VF++ S
Sbjct: 245 YGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS 304

Query: 158 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQ 217
              + +W  MI  Y+ +G+  E+++LF++M  + IKPN  T +S+L     +  +E GR 
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364

Query: 218 VHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGL 277
           VHGL  K+G    N V N+L+  Y    + R A+ +F+  +++D+++WNS+ISG+ +NG 
Sbjct: 365 VHGLSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS 424

Query: 278 DDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLG 317
               + +F +M    V  +  T+ ++F ACA++G+L +G
Sbjct: 425 IHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN65968.21.1e-180100.00hypothetical protein Csa_019583 [Cucumis sativus][more]
XP_011657608.12.2e-176100.00pentatricopeptide repeat-containing protein DOT4, chloroplastic [Cucumis sativus... [more]
KAA0057054.16.7e-16592.43pentatricopeptide repeat-containing protein DOT4 [Cucumis melo var. makuwa][more]
XP_008443463.16.7e-16592.43PREDICTED: pentatricopeptide repeat-containing protein DOT4, chloroplastic [Cucu... [more]
XP_038893908.11.6e-15084.26pentatricopeptide repeat-containing protein DOT4, chloroplastic [Benincasa hispi... [more]
Match NameE-valueIdentityDescription
Q9SN397.9e-6847.24Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Q9M9E23.8e-3834.77Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop... [more]
Q9LIC33.2e-3229.53Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS... [more]
Q3E6Q17.0e-3229.84Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9ZQ741.6e-3132.42Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LV301.1e-176100.00DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G4702... [more]
A0A5A7UPC93.3e-16592.43Pentatricopeptide repeat-containing protein DOT4 OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3B8573.3e-16592.43pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Cucumis melo ... [more]
A0A6J1KNK76.4e-14580.86pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Cucurbita max... [more]
A0A6J1EHU91.4e-14480.86pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Cucurbita mos... [more]
Match NameE-valueIdentityDescription
AT4G18750.15.6e-6947.24Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G15510.12.7e-3934.77Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G13770.12.2e-3329.53Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G11290.15.0e-3329.84Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G03380.11.1e-3232.42Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 62..223
e-value: 3.1E-23
score: 84.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 224..313
e-value: 2.1E-5
score: 26.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 161..207
e-value: 6.3E-11
score: 42.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 263..296
e-value: 3.5E-5
score: 21.7
coord: 163..196
e-value: 5.3E-6
score: 24.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 138..160
e-value: 1.2
score: 9.5
coord: 263..293
e-value: 1.9E-7
score: 30.9
coord: 234..261
e-value: 0.56
score: 10.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 261..295
score: 10.720209
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 160..194
score: 11.180584
NoneNo IPR availablePANTHERPTHR24015:SF739OS03G0644100 PROTEINcoord: 132..317
coord: 81..242
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 132..317
coord: 81..242

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G033170.1CsaV3_1G033170.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding