CsaV3_1G033080 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G033080
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 20106029 .. 20106265 (+)
RNA-Seq ExpressionCsaV3_1G033080
SyntenyCsaV3_1G033080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATCCCTACACTGCCTGCGCCTAAACCATCTGAGACGGAAGAGCAGTCAACAGAGGTTGCATTTGCCAGAGGGTGGAAGAAGGGCTACCAGAGTTTAAGGATTAGAGCCGATTTCATAGCAATTGATTTGGGTACAAATATAATGGATGTGATTTTAGGAATGCAGGAGGACCAATGCGTTTTGATCCAATTTCAAAATTTAGAAACTGAGGAGAGAGATAGATTTGGAGAATGA

mRNA sequence

GAAATCCCTACACTGCCTGCGCCTAAACCATCTGAGACGGAAGAGCAGTCAACAGAGGTTGCATTTGCCAGAGGGTGGAAGAAGGGCTACCAGAGTTTAAGGATTAGAGCCGATTTCATAGCAATTGATTTGGGTACAAATATAATGGATGTGATTTTAGGAATGCAGGAGGACCAATGCGTTTTGATCCAATTTCAAAATTTAGAAACTGAGGAGAGAGATAGATTTGGAGAATGA

Coding sequence (CDS)

GAAATCCCTACACTGCCTGCGCCTAAACCATCTGAGACGGAAGAGCAGTCAACAGAGGTTGCATTTGCCAGAGGGTGGAAGAAGGGCTACCAGAGTTTAAGGATTAGAGCCGATTTCATAGCAATTGATTTGGGTACAAATATAATGGATGTGATTTTAGGAATGCAGGAGGACCAATGCGTTTTGATCCAATTTCAAAATTTAGAAACTGAGGAGAGAGATAGATTTGGAGAATGA

Protein sequence

EIPTLPAPKPSETEEQSTEVAFARGWKKGYQSLRIRADFIAIDLGTNIMDVILGMQEDQCVLIQFQNLETEERDRFGE*
Homology
[Close]
BLAST of CsaV3_1G033080 vs. NCBI nr
Match: KAE8653209.1 (hypothetical protein Csa_019587, partial [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 3.6e-35
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 

Query: 1  EIPTLPAPKPSETEEQSTEVAFARGWKKGYQSLRIRADFIAIDLGTNIMDVILGMQEDQC 60
          EIPTLPAPKPSETEEQSTEVAFARGWKKGYQSLRIRADFIAIDLGTNIMDVILGMQEDQC
Sbjct: 1  EIPTLPAPKPSETEEQSTEVAFARGWKKGYQSLRIRADFIAIDLGTNIMDVILGMQEDQC 60

Query: 61 VLIQFQNLETEERDRFGE 79
          VLIQFQNLETEERDRFGE
Sbjct: 61 VLIQFQNLETEERDRFGE 78

The following BLAST results are available for this feature:
BLAST of CsaV3_1G033080 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8653209.13.6e-35100.00hypothetical protein Csa_019587, partial [Cucumis sativus][more]
BLAST of CsaV3_1G033080 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G033080 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G033080 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G033080.1CsaV3_1G033080.1mRNA