![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CsaV3_1G032700 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCTATTTATTCTTTTTTTAGAACAAGAAATAGGAATGTGTTTGATAATTATTTTTGTTTATTGTTTTTTGAAAAAAAGAAAAACATAAATAAAATGTGTTTGATAACTGTTTCTTATTTCTTTGATTTTTAAAATTTTATTTTTTATTTTATTCACATTTACTTCAATTGAACATCAAACAAAAATATTTATCCTCCATTAAACATTAAAAAAAATCAAACCTTAATAGGAAAAGACGGGGATTGAGATCTAAAGAATAGAGCCGATGAGAGGAAGACAAAAACCTACAACGAAAAGAGGAGGACTGAAACTCATGGCAAAGAGGAAGACAAAAACTCAGCTAAAACCACAGATCTTACAAAAACCCACAAATTTGGAGAAAATCTACAACGAAAACACAATTCACGCAAAAAGGAAGAGAGAAACACAGATCCAACGAATAGGAAGACGTCGCGTAGAGGAAGACGATGAGAGGCAAAGAGAAAGACAGTGAAGATGATGAGAGGAAGAGAAAGATGATGGTTATTTGAAAAAGACGATGAAGATAAGAGGAAAATAAAGAAAACCACGTGAATAGTGGTTATTTGGAAAAGAATATGGAAATGAGACGAAGAAAAAGAAAATCATAACAGAAAAATGAAATAGAAAAAGAATTGAAAAGAAGGAAAATGAATGCAATAGAAAGAATTGAGAAAAAGAAAAGAAAATCAATAAAAAAAATTGAAAAAAAAGAAAAGAAAATCAATAAAAACAATTGAAAAAATAAAGAAACCAGTAGAAAAATTGAAAAATGAAAACCGGAAAAATTACTTTTTTTTTTCTATAATTACTTATAAAATGATAAATGTTTCTATTTTTTTTAGAATTATAAAATGATAAATGTTTCTATTTTTTTTAGAATGAGAAACATGAAACGTTAACAAACACCTCCGTTTCTTAGAAAATGAAAACGTTAACAAAGGGACATTTACGAAAAATAAAAGAATAAAAAAATAAAATTATAAAGTGGACCATAACATAAATATTTAACGAAGCGTGGTCACAGTTTAATTATGGAAAAGTAAGGGTCTCGTTTTAAATTTGAGTTAACTTTGGGGACCGGCCGGAGTCGACGAAGTATTTGGACAGAGTCTCCTTTTTTCGATTTTCGTTCTCTTGTTTCTCAATAACGCGAGAGAGATCCGACGGCGTTCGAATTCCCGAAGAATATATTCCCGGGAAATTTTTTCACAAATCTAATGGTCAGTTTAGTTCTTCTTTGTCAACTGATGATTTCTTCGTTCCTAACTTCAATTACTTATTCGTCGGATTCAGCAATTAGACTTGTTTTCTAGTAACTACCTATGGATTTTCGGTGATGAACATTGCTATTAGGATTATGGAGTTGTTAGTTATGTTCGAAATTTTTTGACATTTAATTGGTTGATGCCTTAGTAGATCTGAGTCCTGAGCTCATTTTAGCAATGTGTTCGTAAGCACAGATCGATCTCTGAACTTACTAAGTTGATTCGAATTTTGTTAATTTCTTCGGAAGATTTGGATTGCATTTTATTTCGATTCAATACTTTAGTGGAAATGCTTGAAGCAGGTAGGAAGATCTTCATTACTTCCTTCGTATGGAGTTTGTGATTTGTCTACGAATCTAGCCGATGACTCGAAGATTTTTATCTTTCGTATGGACAAATCTTAAATTAAAATTAATCGCGCGTGATGAGATTTTTCTTCTCAGTTCATTTTATTTCGATTCAAGACTTTAGTGGAAATGCTTGAAGCTGGTAGGAAGAACTTGATTTTTATAGCATCTGCTCTATAAGAATCTGTGTGAAGCTTTTTCAGTAGGCTACTTAATTTAGAAATTCGATGTACCTTAATCTGCTAGTTTCTGAATGTGCTTCGTGTCTTAGCTTTGTATGTTTCTCAGACAAGATTGATGTGACAACAATTATATAGGGAAAAAAACCATCCGGTTCACCAAAAAGGTCGTCTACCTCCTTAATCCAAACATGTTTGCTTTATTATATGCAGGAATCTTGCCCTGCCATTAAAAGCATTCTTCTTTTGGATTCTGAAGGGAAGCGTGTAGCTGTCAAGTATTATTCTGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAATCCGTTTTCATCAAAACTCAGAAGACTAATGCTCGAACAGAGGGTAGATACCTTTTCATATATTGGGTTTTAACTGTTTTCTGTGAAATTGTGCATCCTTAATCGTGTTAGCTTCTCCTACTTAAGTCAATTTCAATGTCCTTTTAGTCACTGTTAAGAAATTATTAGTTGGTTTATCCATGATCGTTGTCCTTTGCCATGAGACTAAGAATTATTTTTTCAATCTCATTCTCATGGCTATCAGTAGCTGGGTTAGTCATTATCTGTTTCGATCTCTGCATTCTTCTATTGGACCATCTCCCAATCTAACACCATTTTGTTGAATTCAACACTTTGTTTCTTTATGCCTTACATGGTCGGTGAGTTTCTTCTCTACGTTCTAACATTCAATTCACTTTAACAGCGGAGATAGCAATGTTTGAGAGCAATATAGTGGTTTACAAGTTTGCTCAAGACCTTCATTTTTTTGTCACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGTTTTTTTGATGCTGTGGGCATTCTTCTTAGGTCTTGATACTATTTATATATTAATTTTGGATCCTTATGCACTGGCTTGATATTAGTGTTCTCGATGGATATTTATTTTTGTTTCTTGTACTCCAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTGTGTCTCGATGAAATTATCGACGGAGGGTATATCTCATATGCTCTTTCCTTATTACCCATTCTATGCATTTCAATTGTGTGACTTGTTTTTCCATTTCCTTCTATTGATAATTGATCTCTGTATCTTGATTGTGCCACTCTTTTTACTCACCCTCTCTAAGTTGATGCCTGTGTCCATTCTTGCTAGACAAATTGTGAACATGAAAATTGAAGTATGAGTTGTGGATGATTATATATCAAGAATCCAAGGTTGTAGTAATGTCATTACTCGTCAGGAAAGTAGTTGTAGTTTCATGAATTTATGTGGAAAATAAGTTGTTGACTAATGAGTAATATGCTTTCATTGTAGTTGCATAATTCCTATAGAATAGTCTAAGTTATTCTCTCCTGTTCAAGTACTGGCTATTTTGTAGTTTGTGGTTTGTTGCTCGATAACAGATTTGGTTGTCCCACATCTTCATTTCGATATGTCACTATTGTTTACATAAATTGATGGACACACTACATCCGATTATGTTGAAAGTGGAGATGACATTGTGTAACGTGAGGCATAGATTTGAATAAGCTAGAACTGTAGAGCATTGCTATAATTTGTTTTTGATGGAAAGACTACAAACCATTTAAATTTGATTGATTTATTTTCTCCCAAGATTGTTCAGAAATAAATTTATTTTCATCTGAATATTCAAGGTTTGATGTTTTCATTGCCTCATGTGTGGGATTATTGTCATTATGCTTTTCTGAAATTGCAATTTAGCAGTTCTTAACCTTTTCATAAACCATCTTGGCATCCCATACCTTTAGCTATTTAACTGTTTGTGTATTTTTCAGCATTGTTCTCGAGACGGATGCAAATGTCATAGCAGGGAAGGTCGCAAGTCACAGTATTGACAGTAACGCTCCTTTGTCTGAGCAGGTACAGTACAATATTTCTATAGCTTGTTTTGTTTGGTTGGCAATATGAATTATGTTTGTTGTTGGTTCACTGCCTTCTAAAATTTCTGAACATAACATCGTCTAATGCACCTAAATTTTGAATTTTAAAATTTTAAAATGCAAAATTATATTTTAAAAAATGATTAGGAATATAGTATTTCACATTATAAACTCAGTTCATTCTTTTAACTAAATATGTCTTATAACATGTAATATAAATTATATAAGATTACAAAATAATAGTGTTTATATTGGTTAATTTTATGGTTTAAATACATATTTGTATATATTATCTACACGGTAAAAAACAATTGTTTAAATTAGAATCTAATTTCTGAACCTATGACCAAAAACATATTGGAAAGCGTATGAAGTACAATTATGAACCCTATTTTTATTGAATCTCCTAATTCTGATTTTTTGTTTTATGAAGCATGCCTTTTATCTTTTTACTTCTTCTCCCTTTCGTTTTTCCAGTATTTTGAAAGATGTTTTTATCTCTCTTGCAGACAATAAGTCAAGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTCAAGTAATATGTTCTATTGATACAAGTGAGTGGCAAGAACTATCCCCCACACCAAAAAAAAGAAAAAAGAGAAGAAAATTCAGGTCGAGTTGGGGTGGTGTTTTTGGTAAGAGATTGATTGATCTCATGTTTGTATATTCAGCTCATACTATGCTGCCTTACCTTTTGGTAAAACCTGATTTTGGATCTGAGCAGATGTGGTTCATTGCGGGACTGGTGCTAAGTGTTATTATATGTGCCTCTGGAGTTGCAATCTATATTTTCTTTTTAGGCCATTCGATTTTTGTGGTCGTTGGCTAAAGAAAAATTATTTTAGATTACAATGCAAACATATTTTCAAAATATAGTCAAATATCGCCATCTATTTGTTGGTAGGCCACGATAGATTGCTATTTTGGTTTATTTTGCTTATAAAAAAATAGTCAATAGCTAGAAGAGGATCTAGTAGGTTGAGTTCGAATGCCATTATTTTGGGTGTGCATTTAACTATTTAAGAATTAGGAAATGGTTTTGTTGTTAAATGGTGTAGTCTGCTTGTTAGGGAATAAGGCACCAATTCTCATGATACATTTTCAATTAATAAAAGAAGCTAAAGATATAAGCAAAGTGAAATCAAGAGAATTTGACGATTTTTCATTGCGTGGTGGTTCTGTTTTTTGATAACTGTTTTTCGTTTTTTGTTCTAAAATTTGAGGAAGATTTACTAAGAGCTTTTGGTGTATTGGTA ATGGAATCTTGCCCTGCCATTAAAAGCATTCTTCTTTTGGATTCTGAAGGGAAGCGTGTAGCTGTCAAGTATTATTCTGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAATCCGTTTTCATCAAAACTCAGAAGACTAATGCTCGAACAGAGGCGGAGATAGCAATGTTTGAGAGCAATATAGTGGTTTACAAGTTTGCTCAAGACCTTCATTTTTTTGTCACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGTTTTTTTGATGCTGTGGGCATTCTTCTTAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTGTGTCTCGATGAAATTATCGACGGAGGCATTGTTCTCGAGACGGATGCAAATGTCATAGCAGGGAAGGTCGCAAGTCACAGTATTGACAGTAACGCTCCTTTGTCTGAGCAGACAATAAGTCAAGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTCAAGTAA ATGGAATCTTGCCCTGCCATTAAAAGCATTCTTCTTTTGGATTCTGAAGGGAAGCGTGTAGCTGTCAAGTATTATTCTGATGACTGGCCTACAAATAGTGCAAAGGAAGCTTTTGAGAAATCCGTTTTCATCAAAACTCAGAAGACTAATGCTCGAACAGAGGCGGAGATAGCAATGTTTGAGAGCAATATAGTGGTTTACAAGTTTGCTCAAGACCTTCATTTTTTTGTCACGGGTGGAGAAGATGAAAATGAGCTCATTTTAGCATCCGTTCTTCAGGGTTTTTTTGATGCTGTGGGCATTCTTCTTAGGGGTAATGTAGAAAAGAAGGAGGCACTTGAGAACTTGGACCTCATTTTACTGTGTCTCGATGAAATTATCGACGGAGGCATTGTTCTCGAGACGGATGCAAATGTCATAGCAGGGAAGGTCGCAAGTCACAGTATTGACAGTAACGCTCCTTTGTCTGAGCAGACAATAAGTCAAGCATTGGCCACAGCTCGCGAACATCTAGCAAGATCTCTTCTCAAGTAA MESCPAIKSILLLDSEGKRVAVKYYSDDWPTNSAKEAFEKSVFIKTQKTNARTEAEIAMFESNIVVYKFAQDLHFFVTGGEDENELILASVLQGFFDAVGILLRGNVEKKEALENLDLILLCLDEIIDGGIVLETDANVIAGKVASHSIDSNAPLSEQTISQALATAREHLARSLLK* Homology
BLAST of CsaV3_1G032700 vs. NCBI nr
Match: XP_011657415.1 (coatomer subunit zeta-1 [Cucumis sativus] >KGN65568.1 hypothetical protein Csa_019631 [Cucumis sativus]) HSP 1 Score: 339.3 bits (869), Expect = 1.9e-89 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. NCBI nr
Match: XP_008443986.1 (PREDICTED: coatomer subunit zeta-1-like [Cucumis melo]) HSP 1 Score: 332.8 bits (852), Expect = 1.8e-87 Identity = 171/177 (96.61%), Postives = 176/177 (99.44%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. NCBI nr
Match: XP_038895636.1 (coatomer subunit zeta-1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 332.0 bits (850), Expect = 3.1e-87 Identity = 171/177 (96.61%), Postives = 176/177 (99.44%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. NCBI nr
Match: KAA0057104.1 (coatomer subunit zeta-1-like [Cucumis melo var. makuwa] >TYK20639.1 coatomer subunit zeta-1-like [Cucumis melo var. makuwa]) HSP 1 Score: 330.9 bits (847), Expect = 6.9e-87 Identity = 170/176 (96.59%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. NCBI nr
Match: XP_038895635.1 (coatomer subunit zeta-2-like isoform X1 [Benincasa hispida]) HSP 1 Score: 330.1 bits (845), Expect = 1.2e-86 Identity = 170/176 (96.59%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. ExPASy Swiss-Prot
Match: Q940S5 (Coatomer subunit zeta-1 OS=Arabidopsis thaliana OX=3702 GN=At1g60970 PE=2 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 4.1e-74 Identity = 143/177 (80.79%), Postives = 156/177 (88.14%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. ExPASy Swiss-Prot
Match: Q6Z844 (Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ2 PE=2 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 9.1e-74 Identity = 137/176 (77.84%), Postives = 162/176 (92.05%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. ExPASy Swiss-Prot
Match: Q84LG4 (Coatomer subunit zeta-2 OS=Arabidopsis thaliana OX=3702 GN=At3g09800 PE=2 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 2.6e-73 Identity = 139/175 (79.43%), Postives = 157/175 (89.71%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. ExPASy Swiss-Prot
Match: Q8H1F4 (Coatomer subunit zeta-3 OS=Arabidopsis thaliana OX=3702 GN=At4g08520 PE=2 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 1.0e-72 Identity = 139/175 (79.43%), Postives = 157/175 (89.71%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. ExPASy Swiss-Prot
Match: Q9MAX5 (Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPZ1 PE=2 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 1.4e-69 Identity = 134/176 (76.14%), Postives = 153/176 (86.93%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. ExPASy TrEMBL
Match: A0A0A0LUZ4 (Coatomer subunit zeta OS=Cucumis sativus OX=3659 GN=Csa_1G448990 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 9.4e-90 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. ExPASy TrEMBL
Match: A0A1S3B9E0 (Coatomer subunit zeta OS=Cucumis melo OX=3656 GN=LOC103487438 PE=3 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 8.8e-88 Identity = 171/177 (96.61%), Postives = 176/177 (99.44%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. ExPASy TrEMBL
Match: A0A5D3DB03 (Coatomer subunit zeta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00210 PE=3 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 3.3e-87 Identity = 170/176 (96.59%), Postives = 175/176 (99.43%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. ExPASy TrEMBL
Match: A0A6J1EPA3 (Coatomer subunit zeta OS=Cucurbita moschata OX=3662 GN=LOC111434347 PE=3 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 2.2e-86 Identity = 169/177 (95.48%), Postives = 174/177 (98.31%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. ExPASy TrEMBL
Match: A0A6J1CEY0 (Coatomer subunit zeta OS=Momordica charantia OX=3673 GN=LOC111010622 PE=3 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 3.7e-86 Identity = 168/177 (94.92%), Postives = 174/177 (98.31%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. TAIR 10
Match: AT1G60970.1 (SNARE-like superfamily protein ) HSP 1 Score: 278.9 bits (712), Expect = 2.9e-75 Identity = 143/177 (80.79%), Postives = 156/177 (88.14%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. TAIR 10
Match: AT3G09800.1 (SNARE-like superfamily protein ) HSP 1 Score: 275.8 bits (704), Expect = 2.5e-74 Identity = 139/175 (79.43%), Postives = 156/175 (89.14%), Query Frame = 0
BLAST of CsaV3_1G032700 vs. TAIR 10
Match: AT4G08520.1 (SNARE-like superfamily protein ) HSP 1 Score: 274.2 bits (700), Expect = 7.2e-74 Identity = 139/175 (79.43%), Postives = 157/175 (89.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|