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CsaV3_1G032680 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGGTAGAAAATCGAAATCAATATTTTCTTCTTTAAGAAAAGAAAATTGATACAAAGACATTTATTTATTTATTGTCAAGATAATAATAAGAGAAGTGAATGACCAATAGTAACGTCATTGTAAAAACCAAATAAAAAGAAATGGGGTTCCCAATTACGCCCGAGCTGAGTACAAACTGCCAGCTGTACAACTTCAATTCACCAAAATCAGGAAACACCACCGCCTTATTAGAAACCGGACACACCCATTCTCCATTCCGCCAAGCTCCGTTCACCGTCGCTCCCAACTTTTCCGGTGAAATCGCAGAAGAAGATAACAGTGACGACGAGACCTTCGCCGTCGTCTTGATATTCAAGAAACCTTCTCTGATTCTTCTTCTGCAAACAATATGAGTGGCGACGGGAAAAGCAACGTGGTATTCGGCGATCCACATAGTCAATACCATTACGGTACGTTTCAGGGTGTTGCGAACTATTATACTTCTCCTCCACAACCGCAGCCGCAGCCCCAGCCCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCGCAACCCGTTGTTTCTGGTCATCAGCCATGCTACCATGGACATCTGGGTTACCAAGCCGTTCCTGGTAAATAGCTACCCTCGTTGGTGTTTTTTTTTCATCATGTTCGTGGATTTGGATGATTTTGTTATGTATGAATTCTGGCAAATGATGACGAATTTGGAATCTACAGATCAATATCGTGGTTCCTTCTAGGAGTTTGTGCAGAATTTTCGCTCAAATATTATTGTTTAATTGATTATGAATTGTTTGCTTTGTTTAGGGATTGAGTTTTATGGTGTTTCGTGTGGTCTTTGATAATGATCGTGATTATTTTTCTTTGTTACTTCTCTGCACATATTGGTATCCGTTGGTTTGATAATTATTAAATGGGTCTATGATGCTCATTGTGGTTTATAATTGATTTTCTGTATCTGTTGTTTCGGCTGTTATTGATTCACCAGTATGAATGTGTGAGTAATATCCCAATGTTTTTTTTTAATATCACCCCTAATAATGTTTAGGGCCGTGAGAAATAAGGTTAAAAATTATGTTAAGGATTAATAGGGGATGCTTTCTAGCCTACCAGTTGGGACTGTTGACATTATTTACCTGAAGAAGTAACGTAGTGCAGGTGAAATCGAATGCTTCAGGAGCTAACTTATTGAAATAATGACGAACTAGCCAGCTATAGGATATTATTTTGATTCTGAGTTTGTATCTGGCATGGGGACGTAACTATTTCCTTAAAAACAAGGAACATTCTCTTTTAGCATCAGCATGTGGATGTGCAAGAGAGGAGGAGATATATTGAGAATGATACCCTCTTTTTATGGTGATTGCGGAAATATATTTTCTGGTAGACTTAAATTTTAATAGGAGAACAATTGCTGAACTCTTTACTTCGAAATTACCTGTATCATCTGGGTTGCAAAACCTGGGTACTCTATTAAATATCTAAAACCTCTTCGAACTTAATTGGTCTAGAGGTCTTTTTCATTCCACATCTCAATTCTTACGTATTATAGATAGCTCATAGCATGAAATTCTTCTGAAGAATTTGGAAAACAATGGTCTCTTGAGCATGCACAATCATTTTTTTCTGTGTAGAAGGCATCTAGGAAAGTGTTTTAGGAGATAGAAAAGAGTCAGAGATTTCTGAAGAAAGTCTATTCTTGGATGTTGGCTTGAATCTAATTAATTGGCAGACAATGTCTTCAGCTGGAGGATAGTCTGGATGTTACTAAGCCGATTAATCGGGATGTATTGTTAAAGAGAACGGAGAAGTTTTTTTTAATTGAGGAAATAATTGTGGGAAAATTGTGTTTTTATTTCTTTCTTATGTAGTGACTTCCATAAGGTATTCTGGAACTATTCTCTTTACACGGTTGGTGCCAATGGTTGGTTCTGACTATTTAATTTTTTTTGCCTTTTGCTCATCACCCAATGAGATTGCAACAAAGATGTATCAAGTCCTTTTTTAAAGGACTGCTTAGAACTTGTTTATAATGAAAAAAAATCATCGCAATATTCCTTGGAAGACTGTAGTTGTGCAATGCTACCAGTGTACAAATTGGCACATCAAATTTTATCTTTGGTACAACTGGCTACTGAGATTAACAACTCTTTTCATCTTAAAAGTGAAAGGGGTATCACTCACCAGATGTTTCTGTCAACATGTCTTGCTATTTAGAAGTAGCACCTAGCATCTTGCCCAGTGCAAATATTCACCAAATCAACGACGATAAGATTCTGTAATTCACTTATCCATCATCCTACTTAATGCTTTTATTTCTTATAGTTCAAGGTTATGCTATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTAAGTTATATTTGTGAGACCCCATTTTTCTGCACTCATTCCCAGCATGCCGATGATTAAGAAAAATAATTGTTTTCCAGGTTTATGATTGGCTTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAGCTTTTATTGTACTCTTTGTACGGGTCGATTACCGAGAAAAGCCTGGATATGTTGCATGTGCAATTGCTGTAAGTATCTACTATATGAATATATTACCTATCCTCAGAAATGAGTTCTCACCTATCTCAATAATAATAGTGATGACATTACTCTAAGTGATACTCAAAATGAGGAAGATTTGGGATGTTTTAAGACATTCTCTGAAGTCTTAGGTTCAAGGAAAATTTATCGACTGTGTTTTATAGAGCTGAGCCAAGAATTATTGTAGGTGGGTAATGAGTACATAAGTGAGGAGTTGAGCACCCAACTCTTTGTTTCAAATTAGTAAGGGAAAACATCAATTTATACCCTTAATCTTTTGAGTTTGTATTAATTTAAACCATAGACTCATATTTATATCAATTTAAACTCGGTAGCTTTGCGGTGGTATCAATTTACGCCCTCCATAATATTTCGTTTGGAAAAGTCGCGTGTTACTAAAACTTATAATTGTATCAATTAGAATGCCTACACTCTTATAAATGAATCCATAATTTTCTTTTAAAATCATTTATTGACAATTTTGTTAAACCATATAAGACAATTTTTAGAATTAAAGCATAGTGAATGGATGATTTTCGTAAGGAAGAGTCTAAATTGATTGACTTTTGAAAATTTAGAAGTTTGATTATCTCAAATTATAAGTTTCACATAATACTGTTTTCAGAAGTTCAAGTCTCAATTTGATTGCCTGCTGTTTCAATTTCTTGGACTTGACTGTGTTGTATAGGATGTTATAATTTCCATCTACTCATTTTGAAACTGTGCTGTATTTTTGCTTTCTCAGTCAGTTCTTGCTGTCATAGCTATAACATTTGGTATCACCAACGGAGTTGAGCCCTGGTGAAGGAAACATATGAAGAACGGTCTGGTGTGATCGATACCGATGTCACCCTCCCCCTGTATTGACAAACAACTGGTGTGATACTGTAATTAGCTTTTGAATTGTTATTCTTTCCGTCTATATTTATCAACTTATTGGTTTCCTTTACCATATAGATATCTGAATCTTCCTGACTTGCCAAAATTTGAAATGAAATGTTAATAGATTGAAAGACAAAATTATTAGCTTTATTGGAAAGGTTTTTCTTTTTTATTATAATTATAAATTCTGGGATTAGTTTGCACAAGTCTCAGTTGTTTTCAAGAAACCTCATGTTTTGAACACTATTTCCTTTTAGGTAATTCATAAATTAACTCAAAT ATGAGTGGCGACGGGAAAAGCAACGTGGTATTCGGCGATCCACATAGTCAATACCATTACGGTACGTTTCAGGGTGTTGCGAACTATTATACTTCTCCTCCACAACCGCAGCCGCAGCCCCAGCCCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCGCAACCCGTTGTTTCTGGTCATCAGCCATGCTACCATGGACATCTGGGTTACCAAGCCGTTCCTGTTCAAGGTTATGCTATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTATGATTGGCTTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAGCTTTTATTGTACTCTTTGTACGGGTCGATTACCGAGAAAAGCCTGGATATGTTGCATGTGCAATTGCTTCAGTTCTTGCTGTCATAGCTATAACATTTGGTATCACCAACGGAGTTGAGCCCTGGTGA ATGAGTGGCGACGGGAAAAGCAACGTGGTATTCGGCGATCCACATAGTCAATACCATTACGGTACGTTTCAGGGTGTTGCGAACTATTATACTTCTCCTCCACAACCGCAGCCGCAGCCCCAGCCCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCGCAACCCGTTGTTTCTGGTCATCAGCCATGCTACCATGGACATCTGGGTTACCAAGCCGTTCCTGTTCAAGGTTATGCTATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTATGATTGGCTTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAGCTTTTATTGTACTCTTTGTACGGGTCGATTACCGAGAAAAGCCTGGATATGTTGCATGTGCAATTGCTTCAGTTCTTGCTGTCATAGCTATAACATTTGGTATCACCAACGGAGTTGAGCCCTGGTGA MSGDGKSNVVFGDPHSQYHYGTFQGVANYYTSPPQPQPQPQPQSVVGFPQPVAQPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVEPW* Homology
BLAST of CsaV3_1G032680 vs. NCBI nr
Match: XP_004147407.1 (60S ribosomal protein L18a-like protein [Cucumis sativus] >KGN65566.1 hypothetical protein Csa_019751 [Cucumis sativus]) HSP 1 Score: 337.0 bits (863), Expect = 8.7e-89 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. NCBI nr
Match: XP_008444018.1 (PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]) HSP 1 Score: 332.8 bits (852), Expect = 1.6e-87 Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. NCBI nr
Match: XP_038895475.1 (60S ribosomal protein L18a-like protein [Benincasa hispida]) HSP 1 Score: 291.2 bits (744), Expect = 5.5e-75 Identity = 140/159 (88.05%), Postives = 144/159 (90.57%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. NCBI nr
Match: XP_022140257.1 (60S ribosomal protein L18a-like protein [Momordica charantia]) HSP 1 Score: 287.7 bits (735), Expect = 6.0e-74 Identity = 135/159 (84.91%), Postives = 143/159 (89.94%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. NCBI nr
Match: XP_022927552.1 (60S ribosomal protein L18a-like protein [Cucurbita moschata] >KAG6583922.1 60S ribosomal protein L18a-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 281.6 bits (719), Expect = 4.3e-72 Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. ExPASy Swiss-Prot
Match: Q8L9S1 (60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g29970 PE=2 SV=2) HSP 1 Score: 139.8 bits (351), Expect = 2.7e-32 Identity = 73/143 (51.05%), Postives = 92/143 (64.34%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. ExPASy TrEMBL
Match: A0A0A0M051 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G448970 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 4.2e-89 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. ExPASy TrEMBL
Match: A0A1S3B9D9 (60S ribosomal protein L18a-like protein OS=Cucumis melo OX=3656 GN=LOC103487462 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 7.9e-88 Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. ExPASy TrEMBL
Match: A0A6J1CGC1 (60S ribosomal protein L18a-like protein OS=Momordica charantia OX=3673 GN=LOC111010965 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 2.9e-74 Identity = 135/159 (84.91%), Postives = 143/159 (89.94%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. ExPASy TrEMBL
Match: A0A6J1EHH7 (60S ribosomal protein L18a-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434348 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 2.1e-72 Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. ExPASy TrEMBL
Match: A0A6J1KIR0 (60S ribosomal protein L18a-like protein OS=Cucurbita maxima OX=3661 GN=LOC111495603 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 1.0e-71 Identity = 133/159 (83.65%), Postives = 141/159 (88.68%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. TAIR 10
Match: AT1G17080.1 (Ribosomal protein L18ae family ) HSP 1 Score: 162.5 bits (410), Expect = 2.7e-40 Identity = 85/158 (53.80%), Postives = 107/158 (67.72%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. TAIR 10
Match: AT1G53560.1 (Ribosomal protein L18ae family ) HSP 1 Score: 141.0 bits (354), Expect = 8.5e-34 Identity = 71/140 (50.71%), Postives = 88/140 (62.86%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. TAIR 10
Match: AT1G29970.1 (60S ribosomal protein L18A-1 ) HSP 1 Score: 139.8 bits (351), Expect = 1.9e-33 Identity = 73/143 (51.05%), Postives = 92/143 (64.34%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. TAIR 10
Match: AT1G29970.2 (60S ribosomal protein L18A-1 ) HSP 1 Score: 123.6 bits (309), Expect = 1.4e-28 Identity = 66/124 (53.23%), Postives = 80/124 (64.52%), Query Frame = 0
BLAST of CsaV3_1G032680 vs. TAIR 10
Match: AT1G29970.3 (60S ribosomal protein L18A-1 ) HSP 1 Score: 119.4 bits (298), Expect = 2.6e-27 Identity = 73/185 (39.46%), Postives = 92/185 (49.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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