CsaV3_1G032520 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G032520
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr1: 19551427 .. 19553243 (+)
RNA-Seq Expression	CsaV3_1G032520
Synteny	CsaV3_1G032520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCTGCCGGCACCGCCGTGTTTATCTCTTCACTCCAATTTCTTTTCCTCTCTTAAGCAGGTAAATCCCAATTTCAATTCCATTTCCCCTGTTTTTCTCCCTCGTTTTCCTTCAATTGATTCACAACACAGGTCGAAAAGCGCCTCAAATTAGATCATTCATCGCAACGAGACGTTCTTCATCCACCACCGCCATTGCCAGTACGAACCAATTCTTCTTCAACTGAAGAAGACTCACTGAGCACTCCCATGTACCTTCATTTCCCCCAAACCAACACAAGCTCCACCCTACAAGAAAGCAGCCAAGCGCCACTCGAATTCCTCTCAAGTTCCTCCCAATCTCCACCATCTCATCCGAAATCAGAATCGAATCCTCCAAAACCCATCGATCGTGGTCAAAATCGGGATGTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTCGGAGCTAAGAATGGCTGTAATGGCTGTGAGGGATGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTAGAGAGGCTAAATGGATGGATTGAGTTCTTTAGTAATGGTGGTGATGAAGAAGACAGGTTAGAGCCTCTTAGACTGGCGTATTTGCTGTTGGGGAAAGCTGTTTTTGCTTCTAATGACGATGATGGATGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATTATAGGTAATAATTCCACTTCAGTTATCTCTTTTGTTTTGTACATATTTATTTTTTATTTCATAAGCATGAGCAGTTGAATCGAAGCTTTGATTTCCTGTCTGGGTCAATAATGGCCACTATTAGTTCTATTCTGATAGACCTCCTACCATATACCAATATTGTAGAAGAAATAATGAAGAGTTAGTTAGGTTGTTAGTCAAGCTGTTAGTTAGGTAGTTGAGAAATTAGTTAATACGGTTAGTATAAATAAATGCTAAGAAAGAGGGAAGGGTGTGGAATTTGTAAGTGAGGGAGAGAGACAGGCTTCTGTGCATCTTTGAAAGACAAGATAACGGGAGAGTGAGTTCTGAATTGAGACATTCTCAATTCGGCTATTGATTCCTTTGTGTAAGAACAGTTACTAAATACTATCAATAAAGTTTACCTTAATATCAAGTATGGATTCCATCATATTGGTATCAGAGCACGTACATCCTGGGCAAGCGACAAAAAGATGATGAAACATATAGAGGAATGGTTTGAAACCATGGAGCAGGAGATCGCGAGTATGAAAATCGATCTACAACGATTATCAGAACTCGAAGCCAAGATGACGAAACATATGGAGAAGATCGATGTACAAAATGAACTAAACACACAGCAACAACAAAATTTTTTGAAATATATCGAGAGCATGATGAAGGATCCATCCTCATCAACATCGGAATCGGAAAAGGCGTCTAGTAAAATGAAAGCGAAGGTATACGAATCGAATGAAGAACCAAACTCAAGTGAGAAGGAGGAAAGCGATAAGAATAGTGTTCGAAGTAAATTCAAGAAGGTAGAAATGCCCGTGTTTAACAGAAGAAGCAGAATTTGGGAGAAAAGATTTACTGACTGCAGTAAATTCTTTATTTCTGTATGTCTAGGATATTTACATCAACCAAGCTTGGTATTTATAGATTCTTGGCAGCAACTGATAACTGTCTAACAGATTAACTAACACAACTAATACAACAGAAAATAACAGATTAACTAATACAACTAATACAACAGAAAATAACAGTCTAACTA

mRNA sequence

ATGCCGCTGCCGGCACCGCCGTGTTTATCTCTTCACTCCAATTTCTTTTCCTCTCTTAAGCAGGTCGAAAAGCGCCTCAAATTAGATCATTCATCGCAACGAGACGTTCTTCATCCACCACCGCCATTGCCAGTACGAACCAATTCTTCTTCAACTGAAGAAGACTCACTGAGCACTCCCATGTACCTTCATTTCCCCCAAACCAACACAAGCTCCACCCTACAAGAAAGCAGCCAAGCGCCACTCGAATTCCTCTCAAGTTCCTCCCAATCTCCACCATCTCATCCGAAATCAGAATCGAATCCTCCAAAACCCATCGATCGTGGTCAAAATCGGGATGTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTCGGAGCTAAGAATGGCTGTAATGGCTGTGAGGGATGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTAGAGAGGCTAAATGGATGGATTGAGTTCTTTAGTAATGGTGGTGATGAAGAAGACAGGTTAGAGCCTCTTAGACTGGCGTATTTGCTGTTGGGGAAAGCTGTTTTTGCTTCTAATGACGATGATGGATGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATTATAG

Coding sequence (CDS)

ATGCCGCTGCCGGCACCGCCGTGTTTATCTCTTCACTCCAATTTCTTTTCCTCTCTTAAGCAGGTCGAAAAGCGCCTCAAATTAGATCATTCATCGCAACGAGACGTTCTTCATCCACCACCGCCATTGCCAGTACGAACCAATTCTTCTTCAACTGAAGAAGACTCACTGAGCACTCCCATGTACCTTCATTTCCCCCAAACCAACACAAGCTCCACCCTACAAGAAAGCAGCCAAGCGCCACTCGAATTCCTCTCAAGTTCCTCCCAATCTCCACCATCTCATCCGAAATCAGAATCGAATCCTCCAAAACCCATCGATCGTGGTCAAAATCGGGATGTAGACGACATTCAACGGCTAATTCAACTCCTAGGGTTAGAAGATTCGTGTGACGAAAAGGAATTCGGAGCTAAGAATGGCTGTAATGGCTGTGAGGGATGTGAAAGCGGGTTTTACAGTAAGATCGTTGGCTTAAAAGGCCCCAAATGTAGAAAGGAGGTAGAGAGGCTAAATGGATGGATTGAGTTCTTTAGTAATGGTGGTGATGAAGAAGACAGGTTAGAGCCTCTTAGACTGGCGTATTTGCTGTTGGGGAAAGCTGTTTTTGCTTCTAATGACGATGATGGATGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGATTTCTTGCTGAATGATCCTCCTGCATTATAG

Protein sequence

MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGGDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL*

Homology

[Close]

BLAST of CsaV3_1G032520 vs. NCBI nr
Match: XP_004147438.2 (uncharacterized protein LOC101217056 [Cucumis sativus] >XP_031743721.1 uncharacterized protein LOC101217056 [Cucumis sativus] >XP_031743726.1 uncharacterized protein LOC101217056 [Cucumis sativus])

HSP 1 Score: 471.9 bits (1213), Expect = 3.3e-129
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTP 60
           MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTP
Sbjct: 5   MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTP 64

Query: 61  MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL 120
           MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL
Sbjct: 65  MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL 124

Query: 121 IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 180
           IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG
Sbjct: 125 IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 184

Query: 181 GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL 232
           GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
Sbjct: 185 GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL 235

[Close]

BLAST of CsaV3_1G032520 vs. NCBI nr
Match: KGN65550.1 (hypothetical protein Csa_019856 [Cucumis sativus])

HSP 1 Score: 471.9 bits (1213), Expect = 3.3e-129
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTP 60
           MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTP
Sbjct: 1   MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTP 60

Query: 61  MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL 120
           MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL
Sbjct: 61  MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL 120

Query: 121 IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 180
           IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG
Sbjct: 121 IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 180

Query: 181 GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL 232
           GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
Sbjct: 181 GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL 231

[Close]

BLAST of CsaV3_1G032520 vs. NCBI nr
Match: XP_008444181.1 (PREDICTED: uncharacterized protein LOC103487596 [Cucumis melo] >KAA0053967.1 uncharacterized protein E6C27_scaffold318G00090 [Cucumis melo var. makuwa] >TYK20652.1 uncharacterized protein E5676_scaffold480G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114
Identity = 210/231 (90.91%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 2   PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTN-SSSTEEDSLSTP 61
           P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTP
Sbjct: 8   PPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTP 67

Query: 62  MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL 121
           MYLHFPQTNTSSTLQESSQ PLEFLS+ S SPPSHPKS SNPP  IDRGQNRD+DDIQRL
Sbjct: 68  MYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVSNPPNLIDRGQNRDLDDIQRL 127

Query: 122 IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 181
           IQLLGLEDSCDEKE G K GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG
Sbjct: 128 IQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 187

Query: 182 GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL 232
           G EEDRLEPLRLAYLLLGKAVFASN DDGCL+GLEFPSTVEDFLLNDPPAL
Sbjct: 188 GGEEDRLEPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL 238

[Close]

BLAST of CsaV3_1G032520 vs. NCBI nr
Match: XP_038895328.1 (uncharacterized protein LOC120083579 [Benincasa hispida])

HSP 1 Score: 402.5 bits (1033), Expect = 2.4e-108
Identity = 198/229 (86.46%), Postives = 207/229 (90.39%), Query Frame = 0


Query: 2   PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPM 61
           P P PP +SLHSNFFSSLKQVEKRLKLDH SQRDVLHPPP  PV TNSSS+ EDSLSTPM
Sbjct: 4   PQPPPPSVSLHSNFFSSLKQVEKRLKLDHQSQRDVLHPPPSFPVETNSSSSTEDSLSTPM 63

Query: 62  YLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRLI 121
           YLHFPQTNT S LQESS+ PLEFLS+SSQSPPSHPKSESNP K IDRGQN  V DIQRLI
Sbjct: 64  YLHFPQTNTCSALQESSEPPLEFLSNSSQSPPSHPKSESNPSKHIDRGQNCVVGDIQRLI 123

Query: 122 QLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG 181
           QLLGL +SCDE E GAKNGCNGCEGCESGFYSKIVGLKGPKC+KEVERLNGWIEFFSNGG
Sbjct: 124 QLLGLGNSCDEMELGAKNGCNGCEGCESGFYSKIVGLKGPKCKKEVERLNGWIEFFSNGG 183

Query: 182 DEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPA 231
            EE+RLEPLRLAYLL GK+VFASN DDGCLEG+EFPSTVEDFLLNDPPA
Sbjct: 184 GEEERLEPLRLAYLLFGKSVFASNGDDGCLEGMEFPSTVEDFLLNDPPA 232

[Close]

BLAST of CsaV3_1G032520 vs. NCBI nr
Match: KAG6583907.1 (hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 337.4 bits (864), Expect = 9.6e-89
Identity = 174/234 (74.36%), Postives = 191/234 (81.62%), Query Frame = 0


Query: 2   PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPP-----LPVRTNSSSTEEDS 61
           P P PP +SLHS+FFSSLKQVEKRLKLDH SQRD L PP P     LPV   SSS+ E+S
Sbjct: 7   PPPPPPSISLHSSFFSSLKQVEKRLKLDHPSQRDALRPPSPRRASSLPVEIGSSSSFEES 66

Query: 62  LSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDD 121
           LSTPMYLH PQTNT+S+LQESS+ P EFLS+SS       KSESN P  ID G NR VDD
Sbjct: 67  LSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSDL-----KSESNSPNLIDCGHNRPVDD 126

Query: 122 IQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEF 181
           IQRL+QLLGL DS +E+E GA++GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++
Sbjct: 127 IQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQY 186

Query: 182 FSNGGDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPA 231
             NGG E +RLEPLRLAYLL+GKAVFASN  D CLEGLEFPSTVEDFLLNDPPA
Sbjct: 187 LWNGGGEAERLEPLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA 235

[Close]

BLAST of CsaV3_1G032520 vs. ExPASy TrEMBL
Match: A0A0A0LUG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G445870 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.6e-129
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTP 60
           MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTP
Sbjct: 1   MPLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTP 60

Query: 61  MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL 120
           MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL
Sbjct: 61  MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL 120

Query: 121 IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 180
           IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG
Sbjct: 121 IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 180

Query: 181 GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL 232
           GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL
Sbjct: 181 GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL 231

[Close]

BLAST of CsaV3_1G032520 vs. ExPASy TrEMBL
Match: A0A5A7UHE6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00360 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 8.4e-115
Identity = 210/231 (90.91%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 2   PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTN-SSSTEEDSLSTP 61
           P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTP
Sbjct: 8   PPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTP 67

Query: 62  MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL 121
           MYLHFPQTNTSSTLQESSQ PLEFLS+ S SPPSHPKS SNPP  IDRGQNRD+DDIQRL
Sbjct: 68  MYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVSNPPNLIDRGQNRDLDDIQRL 127

Query: 122 IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 181
           IQLLGLEDSCDEKE G K GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG
Sbjct: 128 IQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 187

Query: 182 GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL 232
           G EEDRLEPLRLAYLLLGKAVFASN DDGCL+GLEFPSTVEDFLLNDPPAL
Sbjct: 188 GGEEDRLEPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL 238

[Close]

BLAST of CsaV3_1G032520 vs. ExPASy TrEMBL
Match: A0A1S3B9V1 (uncharacterized protein LOC103487596 OS=Cucumis melo OX=3656 GN=LOC103487596 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 8.4e-115
Identity = 210/231 (90.91%), Postives = 216/231 (93.51%), Query Frame = 0


Query: 2   PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTN-SSSTEEDSLSTP 61
           P P PPCLSLHS+FFSSLKQVEKRLKLDHSSQRDVLHPPPP+PV+TN SSSTEED LSTP
Sbjct: 8   PPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTEEDLLSTP 67

Query: 62  MYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRL 121
           MYLHFPQTNTSSTLQESSQ PLEFLS+ S SPPSHPKS SNPP  IDRGQNRD+DDIQRL
Sbjct: 68  MYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVSNPPNLIDRGQNRDLDDIQRL 127

Query: 122 IQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 181
           IQLLGLEDSCDEKE G K GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG
Sbjct: 128 IQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNG 187

Query: 182 GDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPAL 232
           G EEDRLEPLRLAYLLLGKAVFASN DDGCL+GLEFPSTVEDFLLNDPPAL
Sbjct: 188 GGEEDRLEPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPPAL 238

[Close]

BLAST of CsaV3_1G032520 vs. ExPASy TrEMBL
Match: A0A6J1KGL6 (uncharacterized protein LOC111495590 OS=Cucurbita maxima OX=3661 GN=LOC111495590 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.0e-88
Identity = 173/234 (73.93%), Postives = 191/234 (81.62%), Query Frame = 0


Query: 2   PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPLPVRTNSSSTEEDS 61
           P P PP +SLHS+FFSSLKQVEKRLKLD+ SQRD L PP     P LPV  +SSS+ E+S
Sbjct: 11  PPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSVEES 70

Query: 62  LSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDD 121
           LSTPMYLH  QTNT+S+LQESS+ P EFLS+SS       KSESN P  ID GQNR VDD
Sbjct: 71  LSTPMYLHLSQTNTASSLQESSEPPPEFLSNSSDL-----KSESNSPNLIDCGQNRPVDD 130

Query: 122 IQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEF 181
           IQRL+QLLG  DS +EKE GA++GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI++
Sbjct: 131 IQRLVQLLGFGDSFEEKELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIQY 190

Query: 182 FSNGGDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPA 231
           F  GG E +RLEPLRLAYLL+GKAVFASN  D CLEGLEFPSTVEDFLLNDPPA
Sbjct: 191 FWTGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDPPA 239

[Close]

BLAST of CsaV3_1G032520 vs. ExPASy TrEMBL
Match: A0A6J1END4 (uncharacterized protein LOC111434155 OS=Cucurbita moschata OX=3662 GN=LOC111434155 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 6.7e-88
Identity = 173/234 (73.93%), Postives = 191/234 (81.62%), Query Frame = 0


Query: 2   PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPP-----PPLPVRTNSSSTEEDS 61
           P P  P +SLHS+FFSSLKQVEKRLKLD+ SQRD L PP     P LPV  +SSS+ E+S
Sbjct: 9   PPPPAPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEISSSSSVEES 68

Query: 62  LSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDD 121
           LSTPMYLH PQTNT+S+LQESS+ P EFLS+SS       KSESN P  ID GQNR VDD
Sbjct: 69  LSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSDL-----KSESNSPNLIDCGQNRPVDD 128

Query: 122 IQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEF 181
           IQRL+QLLGL DS +E+E GA++GCNGCEGCESGFYSKIVGLKGPKC KEVERLNGWI +
Sbjct: 129 IQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVERLNGWIHY 188

Query: 182 FSNGGDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPPA 231
           F  GG E +RLEPLRLAYLL+GKAVFASN  D CLEGLEFPSTVEDFLLNDPPA
Sbjct: 189 FWTGGGEAERLEPLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDPPA 237

The following BLAST results are available for this feature:

BLAST of CsaV3_1G032520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147438.2	3.3e-129	100.00	uncharacterized protein LOC101217056 [Cucumis sativus] >XP_031743721.1 uncharact...	[more]
KGN65550.1	3.3e-129	100.00	hypothetical protein Csa_019856 [Cucumis sativus]	[more]
XP_008444181.1	1.7e-114	90.91	PREDICTED: uncharacterized protein LOC103487596 [Cucumis melo] >KAA0053967.1 unc...	[more]
XP_038895328.1	2.4e-108	86.46	uncharacterized protein LOC120083579 [Benincasa hispida]	[more]
KAG6583907.1	9.6e-89	74.36	hypothetical protein SDJN03_19839, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_1G032520 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G032520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUG6	1.6e-129	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G445870 PE=4 SV=1	[more]
A0A5A7UHE6	8.4e-115	90.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B9V1	8.4e-115	90.91	uncharacterized protein LOC103487596 OS=Cucumis melo OX=3656 GN=LOC103487596 PE=...	[more]
A0A6J1KGL6	3.0e-88	73.93	uncharacterized protein LOC111495590 OS=Cucurbita maxima OX=3661 GN=LOC111495590...	[more]
A0A6J1END4	6.7e-88	73.93	uncharacterized protein LOC111434155 OS=Cucurbita moschata OX=3662 GN=LOC1114341...	[more]

BLAST of CsaV3_1G032520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G032520.1	CsaV3_1G032520.1	mRNA