CsaV3_1G032100 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACTCTCCCTTTCTCTCCCTCTCTCATTTTCTCGATTCCTTTTGCCTTATAATTTTTAATTTTCATTCCCTCTTTAATTTCTTCCTTCACAGGTCACTTTTCAACTATAAATTCTCCATTCTCTTCTTCTTTTTTGTTTTGTTTTGTTTTGTTTTAAAACTATAAATCTCATATATCATCTTTTTTTATTTTGTGGGTCTTCACCCTTTCACATGATCATCATCATTTCCAAATCATCAATTTTTCCCTTTCTTCAAAATGAGTGGTGCAATGGGACTATCCAAGTCTAGCATTTTATTGTTTTGGCTTTCGGTTTTAGTTGTTTGTGTTACCTCCGTTGCGGGTGCTCGGAAGACGTTGTTTTTGGATCACAACGGTGTTAGAGACAACAAAAACAGCTTGACAACTACACTGGCAGAGACGACAATCAACAGGTGCAAGTACTCGAAGAACAACGACGTTAACGACCTCCATTGTTGTGAGTGCTTCTTCTTGAGCTCTAAGAAGATGATGATGATCGATAATAATAATGGCACCAACTTTGAAGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATTAAGTAGAGAGGAAAAAGAACAAGTGATCAAGATCAAGATCAAAGTCAATAATATATAATATTATAGTTTATGCTGATCTTGATTATTATCATGCATGATTATGA ATGAGTGGTGCAATGGGACTATCCAAGTCTAGCATTTTATTGTTTTGGCTTTCGGTTTTAGTTGTTTGTGTTACCTCCGTTGCGGGTGCTCGGAAGACGTTGTTTTTGGATCACAACGGTGTTAGAGACAACAAAAACAGCTTGACAACTACACTGGCAGAGACGACAATCAACAGGTGCAAGTACTCGAAGAACAACGACGTTAACGACCTCCATTGTTGTGAGTGCTTCTTCTTGAGCTCTAAGAAGATGATGATGATCGATAATAATAATGGCACCAACTTTGAAGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATTAA ATGAGTGGTGCAATGGGACTATCCAAGTCTAGCATTTTATTGTTTTGGCTTTCGGTTTTAGTTGTTTGTGTTACCTCCGTTGCGGGTGCTCGGAAGACGTTGTTTTTGGATCACAACGGTGTTAGAGACAACAAAAACAGCTTGACAACTACACTGGCAGAGACGACAATCAACAGGTGCAAGTACTCGAAGAACAACGACGTTAACGACCTCCATTGTTGTGAGTGCTTCTTCTTGAGCTCTAAGAAGATGATGATGATCGATAATAATAATGGCACCAACTTTGAAGAGAAAAGGGTTGTTCCTACTGGCCCTAACCCACTTCACAATTAA MSGAMGLSKSSILLFWLSVLVVCVTSVAGARKTLFLDHNGVRDNKNSLTTTLAETTINRCKYSKNNDVNDLHCCECFFLSSKKMMMIDNNNGTNFEEKRVVPTGPNPLHN* Homology
BLAST of CsaV3_1G032100 vs. NCBI nr
Match: KGN65507.1 (hypothetical protein Csa_019832 [Cucumis sativus]) HSP 1 Score: 225.7 bits (574), Expect = 2.0e-55 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_1G032100 vs. NCBI nr
Match: KAA0058189.1 (Clavata3/ESR (CLE) protein [Cucumis melo var. makuwa] >TYK28553.1 Clavata3/ESR (CLE) gene family member [Cucumis melo var. makuwa]) HSP 1 Score: 199.1 bits (505), Expect = 2.0e-47 Identity = 101/111 (90.99%), Postives = 104/111 (93.69%), Query Frame = 0
BLAST of CsaV3_1G032100 vs. NCBI nr
Match: KAG6587715.1 (hypothetical protein SDJN03_16280, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 94.7 bits (234), Expect = 5.2e-16 Identity = 60/106 (56.60%), Postives = 72/106 (67.92%), Query Frame = 0
BLAST of CsaV3_1G032100 vs. NCBI nr
Match: XP_023003872.1 (putative receptor-like protein kinase At4g00960 [Cucurbita maxima]) HSP 1 Score: 63.2 bits (152), Expect = 1.7e-06 Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 0
BLAST of CsaV3_1G032100 vs. ExPASy TrEMBL
Match: A0A0A0LXI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G433060 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 9.5e-56 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_1G032100 vs. ExPASy TrEMBL
Match: A0A5A7UXE2 (Clavata3/ESR (CLE) gene family member OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002000 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 9.5e-48 Identity = 101/111 (90.99%), Postives = 104/111 (93.69%), Query Frame = 0
BLAST of CsaV3_1G032100 vs. ExPASy TrEMBL
Match: A0A6J1KNU3 (putative receptor-like protein kinase At4g00960 OS=Cucurbita maxima OX=3661 GN=LOC111497330 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 8.1e-07 Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 0
BLAST of CsaV3_1G032100 vs. ExPASy TrEMBL
Match: A0A2P5BBD9 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_326890 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 6.4e-04 Identity = 30/86 (34.88%), Postives = 45/86 (52.33%), Query Frame = 0
BLAST of CsaV3_1G032100 vs. ExPASy TrEMBL
Match: A0A2P5AD37 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_344400 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.4e-04 Identity = 30/86 (34.88%), Postives = 45/86 (52.33%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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