CsaV3_1G032080 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCAAGATAACCTGATCTTTATTTCGGCAGATAAAGTTAGGAAATGAGATCCTCACATTTTATTTTCTTTTGCCTTCTCTTTACTTTCTTCTATCTTCGTTCAATGGATCTTTTGCATTCTCCACCTCCACTTTTCACCTCCGAAGGAAGACAAGCAAGAAAGTACCTTGGTACATCCTTTTCCCACGAGGTATGCTACTTCTTTATTTATTTTCTTTTATATATTTATTTATTTCTGAATCTTTCAAGTACTTTTGAGAATCCCTTATTTGTGGTTATGAATATGCCAAACTGCAGGTTCATGAAGACGAGTTCAATAGACCGTCTCCAAAAGATACGTCCTCCAACACACCTGAATATGAAGCAAGTATCAACAGCTTGGGTGAACTTGTATACCACATTGACTATCATGGAGTGACAACGCATCCCAATCCAACGCCAAAACATCCATAGCAAACATATCAACTTTTAAGATGAAATGAATTATTCATACATGTACTGCACTTCAAATACTCTCTTTTGTTTTACAATCTATCAAATGCTAATTTTTTTCATGCTACAATTATATACAAGGTGTAACCTTCCCCCCCAAATCGGCACCTAGTAGCAACAGGCTCCTTACCCAGAGAACCATTGCAGATAAGTCATGGTTGAGCGCTTATTTGAGCTTGCAACTTGCCAAAATATATGTGATTCTGTGAACATGAACCTGAATTGCTTGAAATAGGAATGTCGTTGGGAAAGAACCAGACACATTAATCACTCGTAATTCAATGCAAAGAAATCATTCCTTTCGTATATTGGCTTCTGACCTTTCTAAACCTCTTGAGCAACTTTTTGTAGCACTCCACAGCGTTCTCAAATCTCACTTCACTACAAAATCTAGATTTT ATGAGATCCTCACATTTTATTTTCTTTTGCCTTCTCTTTACTTTCTTCTATCTTCGTTCAATGGATCTTTTGCATTCTCCACCTCCACTTTTCACCTCCGAAGGAAGACAAGCAAGAAAGTACCTTGGTACATCCTTTTCCCACGAGGTTCATGAAGACGAGTTCAATAGACCGTCTCCAAAAGATACGTCCTCCAACACACCTGAATATGAAGCAAGTATCAACAGCTTGGGTGAACTTGTATACCACATTGACTATCATGGAGTGACAACGCATCCCAATCCAACGCCAAAACATCCATAG ATGAGATCCTCACATTTTATTTTCTTTTGCCTTCTCTTTACTTTCTTCTATCTTCGTTCAATGGATCTTTTGCATTCTCCACCTCCACTTTTCACCTCCGAAGGAAGACAAGCAAGAAAGTACCTTGGTACATCCTTTTCCCACGAGGTTCATGAAGACGAGTTCAATAGACCGTCTCCAAAAGATACGTCCTCCAACACACCTGAATATGAAGCAAGTATCAACAGCTTGGGTGAACTTGTATACCACATTGACTATCATGGAGTGACAACGCATCCCAATCCAACGCCAAAACATCCATAG MRSSHFIFFCLLFTFFYLRSMDLLHSPPPLFTSEGRQARKYLGTSFSHEVHEDEFNRPSPKDTSSNTPEYEASINSLGELVYHIDYHGVTTHPNPTPKHP* Homology
BLAST of CsaV3_1G032080 vs. NCBI nr
Match: KGN65505.1 (hypothetical protein Csa_019778 [Cucumis sativus]) HSP 1 Score: 210.7 bits (535), Expect = 5.9e-51 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of CsaV3_1G032080 vs. NCBI nr
Match: KAA0058191.1 (uncharacterized protein E6C27_scaffold274G005110 [Cucumis melo var. makuwa] >TYK28554.1 uncharacterized protein E5676_scaffold629G002010 [Cucumis melo var. makuwa]) HSP 1 Score: 156.0 bits (393), Expect = 1.7e-34 Identity = 75/87 (86.21%), Postives = 77/87 (88.51%), Query Frame = 0
BLAST of CsaV3_1G032080 vs. NCBI nr
Match: XP_022921360.1 (uncharacterized protein LOC111429652 [Cucurbita moschata] >KAG7023353.1 hypothetical protein SDJN02_14378, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147.1 bits (370), Expect = 8.0e-32 Identity = 77/108 (71.30%), Postives = 83/108 (76.85%), Query Frame = 0
BLAST of CsaV3_1G032080 vs. NCBI nr
Match: KAG6589671.1 (hypothetical protein SDJN03_15094, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145.6 bits (366), Expect = 2.3e-31 Identity = 76/108 (70.37%), Postives = 83/108 (76.85%), Query Frame = 0
BLAST of CsaV3_1G032080 vs. NCBI nr
Match: XP_023515382.1 (uncharacterized protein LOC111779554 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 143.7 bits (361), Expect = 8.9e-31 Identity = 75/108 (69.44%), Postives = 82/108 (75.93%), Query Frame = 0
BLAST of CsaV3_1G032080 vs. ExPASy TrEMBL
Match: A0A0A0LUD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G427550 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 2.9e-51 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of CsaV3_1G032080 vs. ExPASy TrEMBL
Match: A0A5D3DYI5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002010 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 8.4e-35 Identity = 75/87 (86.21%), Postives = 77/87 (88.51%), Query Frame = 0
BLAST of CsaV3_1G032080 vs. ExPASy TrEMBL
Match: A0A6J1E5F1 (uncharacterized protein LOC111429652 OS=Cucurbita moschata OX=3662 GN=LOC111429652 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 3.9e-32 Identity = 77/108 (71.30%), Postives = 83/108 (76.85%), Query Frame = 0
BLAST of CsaV3_1G032080 vs. ExPASy TrEMBL
Match: A0A6J1JGL7 (uncharacterized protein LOC111484929 OS=Cucurbita maxima OX=3661 GN=LOC111484929 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 8.1e-30 Identity = 74/108 (68.52%), Postives = 80/108 (74.07%), Query Frame = 0
BLAST of CsaV3_1G032080 vs. ExPASy TrEMBL
Match: A0A2P5B1U7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_335130 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.5e-10 Identity = 44/107 (41.12%), Postives = 60/107 (56.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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