CsaV3_1G031620 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G031620
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Oxysterol-binding protein-related protein 4B-like
Location	chr1: 18696357 .. 18697327 (+)
RNA-Seq Expression	CsaV3_1G031620
Synteny	CsaV3_1G031620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGATTAGATTAGATATTTTAACCTAAAGTTTATGTACAATTTAATCAACTTCCCCTAATTAATCCCATATTAATCCCCCCCATTTCACTCTCTCCTTAATCCCACTTTTCAAAACCTTCCCGGCCACTATCACAAACCCCATATAAAAGATTTGCATGAATTTTACTTTTCAAAAATTGGGAAACTATGAAGGAGGAAAAGAATAGTAATGAATTATTTGTTCTTCCTTTGGATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACTACTGAAGGTGTTCCATTCCAATGGGAGATGCAACCGGGAACTCCCAAGAATAATCCCCCACTCACGGAGGTGATTCTGCCGCCGATCAGCCCTCCCCCGGCGGTGCTCAGCCTTGGTTTATCGAAGCCGGTGAGGGCTGTTCAGAATAAACAACCATTGTTTGTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGCCCAAGAAGAATCCCTGTCCGTTGGATCTTAATAATAAAAACGAGCGGCTGAGATTTGACTCATGTGGGTCCCAGTGTGAGTTAATGGCTGAATCTTCATGCAAAGGAAAATCTGCACCGGCGGGGGGATCTTCCGGTCACTGGCGGCTGGGATGCGGTCCGTGGAGGATCAACCCCATTAAAATAGGTATGGGAAGGCGAGTTTAGTTTCGTGATATTCTCTCCTTTGTTTGTTTGTATGTAGGTTTTGTAAATGAATAAACAAATAAATAAATATTTTCCTCTTTTTCTCTCTCTCTCTCTATTTATATTAAAAAGAACAATAATAATTGACTAAAATTTGTAGCAAGTAAAAATAATTTGAGGTAAGTAGAAGCTTGAATTTGCAAATAATAAGTAGTTGGTATTTTTGTAATTTTCAATTTAGGAGGGTTTTATTAAATAGATTAATGGGAATCTCGTTATTAATTTTCC

mRNA sequence

ATGAAGGAGGAAAAGAATAGTAATGAATTATTTGTTCTTCCTTTGGATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACTACTGAAGGTGTTCCATTCCAATGGGAGATGCAACCGGGAACTCCCAAGAATAATCCCCCACTCACGGAGGTGATTCTGCCGCCGATCAGCCCTCCCCCGGCGGTGCTCAGCCTTGGTTTATCGAAGCCGGTGAGGGCTGTTCAGAATAAACAACCATTGTTTGTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGCCCAAGAAGAATCCCTGTCCGTTGGATCTTAATAATAAAAACGAGCGGCTGAGATTTGACTCATGTGGGTCCCAGTGTGAGTTAATGGCTGAATCTTCATGCAAAGGAAAATCTGCACCGGCGGGGGGATCTTCCGGTCACTGGCGGCTGGGATGCGGTCCGTGGAGGATCAACCCCATTAAAATAGGTATGGGAAGGCGAGTTTAG

Coding sequence (CDS)

ATGAAGGAGGAAAAGAATAGTAATGAATTATTTGTTCTTCCTTTGGATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTAGATTCTACTATAGAAGAACTACTGAAGGTGTTCCATTCCAATGGGAGATGCAACCGGGAACTCCCAAGAATAATCCCCCACTCACGGAGGTGATTCTGCCGCCGATCAGCCCTCCCCCGGCGGTGCTCAGCCTTGGTTTATCGAAGCCGGTGAGGGCTGTTCAGAATAAACAACCATTGTTTGTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGCCCAAGAAGAATCCCTGTCCGTTGGATCTTAATAATAAAAACGAGCGGCTGAGATTTGACTCATGTGGGTCCCAGTGTGAGTTAATGGCTGAATCTTCATGCAAAGGAAAATCTGCACCGGCGGGGGGATCTTCCGGTCACTGGCGGCTGGGATGCGGTCCGTGGAGGATCAACCCCATTAAAATAGGTATGGGAAGGCGAGTTTAG

Protein sequence

MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV*

Homology

[Close]

BLAST of CsaV3_1G031620 vs. NCBI nr
Match: XP_004146363.1 (uncharacterized protein LOC101210202 [Cucumis sativus] >KGN65458.1 hypothetical protein Csa_019691 [Cucumis sativus])

HSP 1 Score: 357.1 bits (915), Expect = 8.7e-95
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEV 60
           MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEV
Sbjct: 1   MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEV 60

Query: 61  ILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNERL 120
           ILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNERL
Sbjct: 61  ILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNERL 120

Query: 121 RFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV 172
           RFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV
Sbjct: 121 RFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV 171

[Close]

BLAST of CsaV3_1G031620 vs. NCBI nr
Match: KAA0058273.1 (oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa] >TYK11825.1 oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa])

HSP 1 Score: 278.1 bits (710), Expect = 5.1e-71
Identity = 134/149 (89.93%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 25  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQ 84
           MSRSSRFYYRRTTEGVPFQWEMQPGTPK+NPPLTEVI PPISPPPAVLSLG SKPVR VQ
Sbjct: 1   MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQ 60

Query: 85  NKQPLFVLFGPWRKQ--PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA 144
           NKQ LFVLFGPWRKQ  PKPKPKKNPCPLDLN  NERLRFDSCGSQCELMAESSCK +S+
Sbjct: 61  NKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS 120

Query: 145 PAGGSSGHWRLGCGPWRINPIKIGMGRRV 172
           P G SSG WRLGCGPWRINPIKIGMGRRV
Sbjct: 121 PVGESSGQWRLGCGPWRINPIKIGMGRRV 149

[Close]

BLAST of CsaV3_1G031620 vs. NCBI nr
Match: XP_038878338.1 (uncharacterized protein LOC120070597 [Benincasa hispida])

HSP 1 Score: 250.8 bits (639), Expect = 8.8e-63
Identity = 122/147 (82.99%), Postives = 126/147 (85.71%), Query Frame = 0


Query: 25  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQ 84
           MSRSSRFYYRRTTEGVPFQWEMQPGTPKN PPLT+V+ PPISPPPA+LSL LSKP RAVQ
Sbjct: 1   MSRSSRFYYRRTTEGVPFQWEMQPGTPKNTPPLTDVVPPPISPPPAMLSLSLSKPGRAVQ 60

Query: 85  NKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSAPA 144
           NKQPLFVLFGPW KQ   KPKKNPCPLD NN  ERLRFDSCGS CE M ESSCK KS  A
Sbjct: 61  NKQPLFVLFGPWWKQ--FKPKKNPCPLDHNNDKERLRFDSCGSHCEFMEESSCKAKSLQA 120

Query: 145 GGSSGHWRLGCGPWRINPIKIGMGRRV 172
             SSGHWR+GCGPWRINPIKI  GRRV
Sbjct: 121 AESSGHWRVGCGPWRINPIKIATGRRV 145

[Close]

BLAST of CsaV3_1G031620 vs. NCBI nr
Match: XP_023530969.1 (uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.6 bits (449), Expect = 9.4e-41
Identity = 107/181 (59.12%), Postives = 125/181 (69.06%), Query Frame = 0


Query: 1   MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTE 60
           MK+EK+  E FVLPLDN PSR SS+  SSR +YYRRTTEGVPFQWEMQPGTPK+  P TE
Sbjct: 1   MKDEKDDAE-FVLPLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPKDQ-PYTE 60

Query: 61  VILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNER 120
            +   I+PPPA LSL   KP R  Q KQ LF+LF PWRKQ   K KK+ C  D   ++ R
Sbjct: 61  AVTLLITPPPAALSLRPPKPAR-TQGKQSLFLLFRPWRKQ--SKSKKHSCLSD-EFEDGR 120

Query: 121 LRFDSCGSQCELMAESSCKGKSA---------PAGGSSGHWRLGCGPWRINPIKIGMGRR 172
            RF SCGSQCE + +S C+ KS+         PA  SS H RLGCGPWRINP++I +GRR
Sbjct: 121 SRFGSCGSQCEFI-QSPCQPKSSSSSSSWSSLPAAESSAHRRLGCGPWRINPLRIAIGRR 174

[Close]

BLAST of CsaV3_1G031620 vs. NCBI nr
Match: XP_023007086.1 (uncharacterized protein LOC111499680 [Cucurbita maxima])

HSP 1 Score: 175.3 bits (443), Expect = 4.7e-40
Identity = 106/180 (58.89%), Postives = 124/180 (68.89%), Query Frame = 0


Query: 1   MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTE 60
           MK+EK+  E FVL LDN PSR SS+  SSR +YYRRTTEGVPFQWEMQPGTPK +PP TE
Sbjct: 1   MKDEKDDAE-FVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPK-DPPYTE 60

Query: 61  VILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNER 120
            +   I+PPPA LSL   KP R    KQ LF+LF PWRKQ   K KK+ C  D   ++ R
Sbjct: 61  AVTLLITPPPAALSLRPPKPAR-THGKQSLFLLFRPWRKQ--SKSKKHSCLSD-EFEDGR 120

Query: 121 LRFDSCGSQCELMAESSCKGKSA--------PAGGSSGHWRLGCGPWRINPIKIGMGRRV 172
            RF SCGSQCE + +S C+ KS+        PA  SS H RLGCGPWRINP++I +GRRV
Sbjct: 121 TRFGSCGSQCEFI-QSPCEPKSSSSSAWSSLPAAESSAHRRLGCGPWRINPLRIAIGRRV 173

[Close]

BLAST of CsaV3_1G031620 vs. ExPASy TrEMBL
Match: A0A0A0LUL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423160 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.2e-95
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEV 60
           MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEV
Sbjct: 1   MKEEKNSNELFVLPLDNFPSRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEV 60

Query: 61  ILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNERL 120
           ILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNERL
Sbjct: 61  ILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNERL 120

Query: 121 RFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV 172
           RFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV
Sbjct: 121 RFDSCGSQCELMAESSCKGKSAPAGGSSGHWRLGCGPWRINPIKIGMGRRV 171

[Close]

BLAST of CsaV3_1G031620 vs. ExPASy TrEMBL
Match: A0A5D3CJV8 (Oxysterol-binding protein-related protein 4B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00380 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.5e-71
Identity = 134/149 (89.93%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 25  MSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPVRAVQ 84
           MSRSSRFYYRRTTEGVPFQWEMQPGTPK+NPPLTEVI PPISPPPAVLSLG SKPVR VQ
Sbjct: 1   MSRSSRFYYRRTTEGVPFQWEMQPGTPKSNPPLTEVIPPPISPPPAVLSLGFSKPVRVVQ 60

Query: 85  NKQPLFVLFGPWRKQ--PKPKPKKNPCPLDLNNKNERLRFDSCGSQCELMAESSCKGKSA 144
           NKQ LFVLFGPWRKQ  PKPKPKKNPCPLDLN  NERLRFDSCGSQCELMAESSCK +S+
Sbjct: 61  NKQSLFVLFGPWRKQPKPKPKPKKNPCPLDLNKNNERLRFDSCGSQCELMAESSCKDRSS 120

Query: 145 PAGGSSGHWRLGCGPWRINPIKIGMGRRV 172
           P G SSG WRLGCGPWRINPIKIGMGRRV
Sbjct: 121 PVGESSGQWRLGCGPWRINPIKIGMGRRV 149

[Close]

BLAST of CsaV3_1G031620 vs. ExPASy TrEMBL
Match: A0A6J1KZJ1 (uncharacterized protein LOC111499680 OS=Cucurbita maxima OX=3661 GN=LOC111499680 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.3e-40
Identity = 106/180 (58.89%), Postives = 124/180 (68.89%), Query Frame = 0


Query: 1   MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTE 60
           MK+EK+  E FVL LDN PSR SS+  SSR +YYRRTTEGVPFQWEMQPGTPK +PP TE
Sbjct: 1   MKDEKDDAE-FVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPK-DPPYTE 60

Query: 61  VILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNER 120
            +   I+PPPA LSL   KP R    KQ LF+LF PWRKQ   K KK+ C  D   ++ R
Sbjct: 61  AVTLLITPPPAALSLRPPKPAR-THGKQSLFLLFRPWRKQ--SKSKKHSCLSD-EFEDGR 120

Query: 121 LRFDSCGSQCELMAESSCKGKSA--------PAGGSSGHWRLGCGPWRINPIKIGMGRRV 172
            RF SCGSQCE + +S C+ KS+        PA  SS H RLGCGPWRINP++I +GRRV
Sbjct: 121 TRFGSCGSQCEFI-QSPCEPKSSSSSAWSSLPAAESSAHRRLGCGPWRINPLRIAIGRRV 173

[Close]

BLAST of CsaV3_1G031620 vs. ExPASy TrEMBL
Match: A0A6J1EQV3 (uncharacterized protein LOC111436686 OS=Cucurbita moschata OX=3662 GN=LOC111436686 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.5e-39
Identity = 105/180 (58.33%), Postives = 123/180 (68.33%), Query Frame = 0


Query: 1   MKEEKNSNELFVLPLDNFPSRNSSMSRSSR-FYYRRTTEGVPFQWEMQPGTPKNNPPLTE 60
           MK+EK+  E FVL LDN PSR SS+  SSR +YYRRTTEGVPFQWEMQPGTPK +PP TE
Sbjct: 1   MKDEKDDAE-FVLSLDNLPSRCSSLGCSSRLYYYRRTTEGVPFQWEMQPGTPK-DPPYTE 60

Query: 61  VILPPISPPPAVLSLGLSKPVRAVQNKQPLFVLFGPWRKQPKPKPKKNPCPLDLNNKNER 120
            +   I+PPPA LSL   KP R    KQ LF+LF PWRKQ   K +K+ C  D    + R
Sbjct: 61  AVTLLITPPPAALSLRPPKPAR-THGKQSLFLLFRPWRKQ--SKSQKHSCLSD-EFGDGR 120

Query: 121 LRFDSCGSQCELMAESSCKGKSA--------PAGGSSGHWRLGCGPWRINPIKIGMGRRV 172
            RF SCGSQCE + +S C+ KS+        PA  SS H RLGCGPWRINP++I +GRRV
Sbjct: 121 TRFGSCGSQCEFI-QSPCEPKSSSSSSWSSLPAAESSAHRRLGCGPWRINPLRIAIGRRV 173

[Close]

BLAST of CsaV3_1G031620 vs. ExPASy TrEMBL
Match: A0A2N9IW61 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56261 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.2e-18
Identity = 75/183 (40.98%), Postives = 89/183 (48.63%), Query Frame = 0


Query: 20  SRNSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKP 79
           SRNSS+  SSR YY R  EGVPF WEMQPG  K  PP  EVI PPISPPPAVLSLGL KP
Sbjct: 27  SRNSSVGCSSRIYYYRNAEGVPFNWEMQPGKSK-EPPKDEVI-PPISPPPAVLSLGLPKP 86

Query: 80  V------RAVQNKQPLFVLFGPWRKQPKPKPKKN-----PCPLDLNNKNERL-RFDSCGS 139
                  +  Q   P  + F  W K  K K  KN      C    ++ +++  RF+ C S
Sbjct: 87  CIEVHPSKQAQKTWPTRLRF--WYKSKKNKMSKNINIAKACSRGSHDGSDKTERFEFCSS 146

Query: 140 QCELMAESSCKGKSA-------------------PAGGSSGHWRLGCGPWRINPIKIGMG 172
            CE MA S     S+                     G  S H  L C PW I+ I + + 
Sbjct: 147 DCEFMASSPQVSSSSSWSSLSFSNGPLVQSSRLGSPGRDSFHGPLSCSPWNISTILVSIV 205

[Close]

BLAST of CsaV3_1G031620 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-12
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 23 SSMSRSSR--FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPV 82
          SS+SR+S   +Y  R  EGVPF+WEMQPGTP N  P    ++PP+SPPPA+LSLGL KP 
Sbjct: 10 SSISRNSSVGYYDERMPEGVPFEWEMQPGTPINTQP--REVVPPLSPPPAMLSLGLPKPS 69

Query: 83 RAVQ 85
           +++
Sbjct: 70 ISIE 71

[Close]

BLAST of CsaV3_1G031620 vs. TAIR 10
Match: AT4G25850.2 (OSBP(oxysterol binding protein)-related protein 4B )

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-12
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 23 SSMSRSSR--FYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLSKPV 82
          SS+SR+S   +Y  R  EGVPF+WEMQPGTP N  P    ++PP+SPPPA+LSLGL KP 
Sbjct: 10 SSISRNSSVGYYDERMPEGVPFEWEMQPGTPINTQP--REVVPPLSPPPAMLSLGLPKPS 69

Query: 83 RAVQ 85
           +++
Sbjct: 70 ISIE 71

[Close]

BLAST of CsaV3_1G031620 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04
Identity = 30/73 (41.10%), Postives = 40/73 (54.79%), Query Frame = 0


Query: 22 NSSMSRSSRFYYRRTTEGVPFQWEMQPGTPKNNPPLTEVILPPISPPPAVLSLGLS---K 81
          +S ++ SSR YY      VPF WE +PGTPK+      + LPP++PPP+  S   S   K
Sbjct: 22 SSQVNSSSRIYYYGGA-SVPFLWETRPGTPKHALFSESLRLPPLTPPPSYYSSSSSSGNK 81

Query: 82 PVRAVQNKQPLFV 92
            +A   KQ  FV
Sbjct: 82 LSKARTIKQTRFV 93

[Close]

BLAST of CsaV3_1G031620 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 9.8e-04
Identity = 28/75 (37.33%), Postives = 40/75 (53.33%), Query Frame = 0


Query: 4   EKNSNELFVLPLDNFPSRNSSMSRSSR----FYYRRTTEGVPFQWEMQPGTPKNNPPLTE 63
           +K     F   L +   R SS+S +      +YY      VPF+WE  PGTPK+  P +E
Sbjct: 35  KKQDTATFSGKLPSTKQRFSSVSAACPSFRIYYYDGAAGAVPFEWESHPGTPKH--PSSE 94

Query: 64  V-ILPPISPPPAVLS 74
           +  LPP++PPP+  S
Sbjct: 95  LPTLPPLTPPPSHFS 107

The following BLAST results are available for this feature:

BLAST of CsaV3_1G031620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146363.1	8.7e-95	100.00	uncharacterized protein LOC101210202 [Cucumis sativus] >KGN65458.1 hypothetical ...	[more]
KAA0058273.1	5.1e-71	89.93	oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa] >TY...	[more]
XP_038878338.1	8.8e-63	82.99	uncharacterized protein LOC120070597 [Benincasa hispida]	[more]
XP_023530969.1	9.4e-41	59.12	uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo]	[more]
XP_023007086.1	4.7e-40	58.89	uncharacterized protein LOC111499680 [Cucurbita maxima]	[more]

BLAST of CsaV3_1G031620 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G031620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUL8	4.2e-95	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423160 PE=4 SV=1	[more]
A0A5D3CJV8	2.5e-71	89.93	Oxysterol-binding protein-related protein 4B-like OS=Cucumis melo var. makuwa OX...	[more]
A0A6J1KZJ1	2.3e-40	58.89	uncharacterized protein LOC111499680 OS=Cucurbita maxima OX=3661 GN=LOC111499680...	[more]
A0A6J1EQV3	1.5e-39	58.33	uncharacterized protein LOC111436686 OS=Cucurbita moschata OX=3662 GN=LOC1114366...	[more]
A0A2N9IW61	4.2e-18	40.98	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56261 PE=4 SV=1	[more]

BLAST of CsaV3_1G031620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25845.1	4.4e-12	56.25	BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-rela...	[more]
AT4G25850.2	4.4e-12	56.25	OSBP(oxysterol binding protein)-related protein 4B	[more]
AT2G40475.1	3.4e-04	41.10	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G01790.1	9.8e-04	37.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33257:SF6	OXYSTEROL-BINDING 4B-LIKE PROTEIN-RELATED	coord: 15..136
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 15..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G031620.1	CsaV3_1G031620.1	mRNA