CsaV3_1G031210 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G031210
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionPTI1-like tyrosine-protein kinase
Locationchr1: 18429084 .. 18429515 (+)
RNA-Seq ExpressionCsaV3_1G031210
SyntenyCsaV3_1G031210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCCTCTTTCAGTTGCTGTGATTCTGAGAAAGTAGACCGACAACGGTGATTTCTTCATCTCTGATCTTCAATTATGGGCTTTAGTTAATTTTATTGCTTTTTGGGATGGGTTTATTAATTTGTGTTTTTGGGGAAAATTAAGGTTGGGTAGTAGTGGTTTCAACAGTAGTTCATGGAGGATGTATACATACAAGGAGTTGCATGCGGCAACTAATGGTTTCCATGATGATAACAAACTGGGAGAAGGTGGATTTGGAAGTGTTTACTGGGGAAAGACTACTGATGGCCTTCAGGTAACTTAAATTGTTTTTTTTTTTTTGTGTATATTTGTTTTATTCATTATTAAAAGTTGGTGCTTGGATCTCATTCGATTTAGATGATACTGTTATGGGCCTTTGGACTTTGTCCACTTCAATACTTTAGTTAG

mRNA sequence

ATGGGATCCTCTTTCAGTTGCTGTGATTCTGAGAAAGTAGACCGACAACGGTTGGGTAGTAGTGGTTTCAACAGTAGTTCATGGAGGATGTATACATACAAGGAGTTGCATGCGGCAACTAATGGTTTCCATGATGATAACAAACTGGGAGAAGGTGGATTTGGAAGTGTTTACTGGGGAAAGACTACTGATGGCCTTCAGATGATACTGTTATGGGCCTTTGGACTTTGTCCACTTCAATACTTTAGTTAG

Coding sequence (CDS)

ATGGGATCCTCTTTCAGTTGCTGTGATTCTGAGAAAGTAGACCGACAACGGTTGGGTAGTAGTGGTTTCAACAGTAGTTCATGGAGGATGTATACATACAAGGAGTTGCATGCGGCAACTAATGGTTTCCATGATGATAACAAACTGGGAGAAGGTGGATTTGGAAGTGTTTACTGGGGAAAGACTACTGATGGCCTTCAGATGATACTGTTATGGGCCTTTGGACTTTGTCCACTTCAATACTTTAGTTAG

Protein sequence

MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWGKTTDGLQMILLWAFGLCPLQYFS*
Homology
BLAST of CsaV3_1G031210 vs. NCBI nr
Match: KGN65415.1 (hypothetical protein Csa_020118 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 3.2e-42
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWG 60
          MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWG
Sbjct: 1  MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWG 60

Query: 61 KTTDGLQMILLWAFGLCPLQYFS 84
          KTTDGLQMILLWAFGLCPLQYFS
Sbjct: 61 KTTDGLQMILLWAFGLCPLQYFS 83

BLAST of CsaV3_1G031210 vs. NCBI nr
Match: XP_004146351.1 (PTI1-like tyrosine-protein kinase At3g15890 [Cucumis sativus])

HSP 1 Score: 146.7 bits (369), Expect = 8.7e-32
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0

Query: 1  MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWG 60
          MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWG
Sbjct: 1  MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWG 60

Query: 61 KTTDGLQM 69
          KTTDGLQ+
Sbjct: 61 KTTDGLQI 68

BLAST of CsaV3_1G031210 vs. NCBI nr
Match: KAA0064001.1 (PTI1-like tyrosine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26
Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0

Query: 1  MGSSFSCCDSEKVDRQRLGSSG--FNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60
          MGSSFSCCDSEKVD  RLGSSG   NSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY
Sbjct: 1  MGSSFSCCDSEKVD--RLGSSGGNGNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60

Query: 61 WGKTTDGLQMI 70
          WGKTTDGLQ +
Sbjct: 61 WGKTTDGLQKL 69

BLAST of CsaV3_1G031210 vs. NCBI nr
Match: XP_008453646.1 (PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Cucumis melo])

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26
Identity = 64/70 (91.43%), Postives = 65/70 (92.86%), Query Frame = 0

Query: 1  MGSSFSCCDSEKVDRQRLGSSG--FNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60
          MGSSFSCCDSEKVD  RLGSSG   NSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY
Sbjct: 1  MGSSFSCCDSEKVD--RLGSSGGNGNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60

Query: 61 WGKTTDGLQM 69
          WGKTTDGLQ+
Sbjct: 61 WGKTTDGLQI 68

BLAST of CsaV3_1G031210 vs. NCBI nr
Match: TYK09477.1 (PTI1-like tyrosine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 129.0 bits (323), Expect = 1.9e-26
Identity = 64/69 (92.75%), Postives = 64/69 (92.75%), Query Frame = 0

Query: 1  MGSSFSCCDSEKVDRQRLGSSG--FNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60
          MGSSFSCCDSEKVD  RLGSSG   NSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY
Sbjct: 1  MGSSFSCCDSEKVD--RLGSSGGNGNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60

Query: 61 WGKTTDGLQ 68
          WGKTTDGLQ
Sbjct: 61 WGKTTDGLQ 67

BLAST of CsaV3_1G031210 vs. ExPASy Swiss-Prot
Match: Q9LSC2 (PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-11
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0

Query: 6  SCC----DSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWGK 65
          SCC    D +K +++          SWR+++ KELHAATN F+ DNKLGEG FGSVYWG+
Sbjct: 6  SCCGKGFDGKKKEKE--------EPSWRVFSLKELHAATNSFNYDNKLGEGRFGSVYWGQ 64

Query: 66 TTDGLQM 69
            DG Q+
Sbjct: 66 LWDGSQI 64

BLAST of CsaV3_1G031210 vs. ExPASy Swiss-Prot
Match: Q9C6K9 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 5.0e-06
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0

Query: 30  MYTYKELHAATNGFHDDNKLGEGGFGSVYWGKTTDGLQM 69
           +++YKEL AAT+ F  D  LG+GGFG+VY+GK  DG ++
Sbjct: 278 IFSYKELQAATDNFSKDRLLGDGGFGTVYYGKVRDGREV 316

BLAST of CsaV3_1G031210 vs. ExPASy Swiss-Prot
Match: P85193 (Putative serine/threonine-protein kinase (Fragment) OS=Helianthus annuus OX=4232 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 6.5e-06
Identity = 24/66 (36.36%), Postives = 37/66 (56.06%), Query Frame = 0

Query: 5  FSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWGKTTD 64
          F     +KV   +    G +   +R+++Y EL  A +GF   NK+GEGG G+VY G+ TD
Sbjct: 11 FCSTSDDKVVVSKNDKGGESGKKFRLFSYHELKVACDGFSSKNKVGEGGCGAVYKGRLTD 70

Query: 65 GLQMIL 71
          G  + +
Sbjct: 71 GTMVAI 76

BLAST of CsaV3_1G031210 vs. ExPASy Swiss-Prot
Match: Q8VYT3 (Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.5e-05
Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 0

Query: 14  DRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWGKTTDG 66
           D+Q  G  G    + R +T++ELH  T+GF   N LG GGFG+VY GK  DG
Sbjct: 276 DKQEEGLQGL--GNLRSFTFRELHVYTDGFSSKNILGAGGFGNVYRGKLGDG 325

BLAST of CsaV3_1G031210 vs. ExPASy Swiss-Prot
Match: Q3EDL4 (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-05
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0

Query: 29  RMYTYKELHAATNGFHDDNKLGEGGFGSVYWGKTTDGLQM 69
           R YT +EL AATNG  ++N +GEGG+G VY G  TDG ++
Sbjct: 140 RWYTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKV 179

BLAST of CsaV3_1G031210 vs. ExPASy TrEMBL
Match: A0A0A0LU14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G418810 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.5e-42
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0

Query: 1  MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWG 60
          MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWG
Sbjct: 1  MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWG 60

Query: 61 KTTDGLQMILLWAFGLCPLQYFS 84
          KTTDGLQMILLWAFGLCPLQYFS
Sbjct: 61 KTTDGLQMILLWAFGLCPLQYFS 83

BLAST of CsaV3_1G031210 vs. ExPASy TrEMBL
Match: A0A5A7VE42 (PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold117G00060 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 7.0e-27
Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0

Query: 1  MGSSFSCCDSEKVDRQRLGSSG--FNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60
          MGSSFSCCDSEKVD  RLGSSG   NSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY
Sbjct: 1  MGSSFSCCDSEKVD--RLGSSGGNGNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60

Query: 61 WGKTTDGLQMI 70
          WGKTTDGLQ +
Sbjct: 61 WGKTTDGLQKL 69

BLAST of CsaV3_1G031210 vs. ExPASy TrEMBL
Match: A0A1S3BWV2 (PTI1-like tyrosine-protein kinase At3g15890 OS=Cucumis melo OX=3656 GN=LOC103494300 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 7.0e-27
Identity = 64/70 (91.43%), Postives = 65/70 (92.86%), Query Frame = 0

Query: 1  MGSSFSCCDSEKVDRQRLGSSG--FNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60
          MGSSFSCCDSEKVD  RLGSSG   NSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY
Sbjct: 1  MGSSFSCCDSEKVD--RLGSSGGNGNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60

Query: 61 WGKTTDGLQM 69
          WGKTTDGLQ+
Sbjct: 61 WGKTTDGLQI 68

BLAST of CsaV3_1G031210 vs. ExPASy TrEMBL
Match: A0A5D3CBW6 (PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00750 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.1e-27
Identity = 64/69 (92.75%), Postives = 64/69 (92.75%), Query Frame = 0

Query: 1  MGSSFSCCDSEKVDRQRLGSSG--FNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60
          MGSSFSCCDSEKVD  RLGSSG   NSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY
Sbjct: 1  MGSSFSCCDSEKVD--RLGSSGGNGNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVY 60

Query: 61 WGKTTDGLQ 68
          WGKTTDGLQ
Sbjct: 61 WGKTTDGLQ 67

BLAST of CsaV3_1G031210 vs. ExPASy TrEMBL
Match: A0A6J1JMI5 (PTI1-like tyrosine-protein kinase At3g15890 OS=Cucurbita maxima OX=3661 GN=LOC111485734 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.0e-22
Identity = 52/68 (76.47%), Postives = 60/68 (88.24%), Query Frame = 0

Query: 1  MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWG 60
          MGSSFSCC SEK+D+  +G     +SSWRM+TYKELHAATNGFH+DNKLGEGGFGSVYWG
Sbjct: 1  MGSSFSCCGSEKIDQGFVG----GNSSWRMFTYKELHAATNGFHEDNKLGEGGFGSVYWG 60

Query: 61 KTTDGLQM 69
          KT+DGLQ+
Sbjct: 61 KTSDGLQI 64

BLAST of CsaV3_1G031210 vs. TAIR 10
Match: AT1G52540.1 (Protein kinase superfamily protein )

HSP 1 Score: 70.9 bits (172), Expect = 5.7e-13
Identity = 36/65 (55.38%), Postives = 45/65 (69.23%), Query Frame = 0

Query: 5  FSC-CDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWGKTT 64
          FSC C  +  DRQ+   +     SWR+++ KELHAATN F+ DNKLGEG FGSVYWG+  
Sbjct: 4  FSCFCCGKGFDRQKKVKT---EPSWRIFSLKELHAATNSFNYDNKLGEGRFGSVYWGQLW 63

Query: 65 DGLQM 69
          DG Q+
Sbjct: 64 DGSQI 65

BLAST of CsaV3_1G031210 vs. TAIR 10
Match: AT3G15890.1 (Protein kinase superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 2.8e-12
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0

Query: 6  SCC----DSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWGK 65
          SCC    D +K +++          SWR+++ KELHAATN F+ DNKLGEG FGSVYWG+
Sbjct: 6  SCCGKGFDGKKKEKE--------EPSWRVFSLKELHAATNSFNYDNKLGEGRFGSVYWGQ 64

Query: 66 TTDGLQM 69
            DG Q+
Sbjct: 66 LWDGSQI 64

BLAST of CsaV3_1G031210 vs. TAIR 10
Match: AT1G25390.1 (Protein kinase superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 3.6e-07
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0

Query: 30  MYTYKELHAATNGFHDDNKLGEGGFGSVYWGKTTDGLQM 69
           +++YKEL AAT+ F  D  LG+GGFG+VY+GK  DG ++
Sbjct: 278 IFSYKELQAATDNFSKDRLLGDGGFGTVYYGKVRDGREV 316

BLAST of CsaV3_1G031210 vs. TAIR 10
Match: AT4G30520.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06
Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 0

Query: 14  DRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWGKTTDG 66
           D+Q  G  G    + R +T++ELH  T+GF   N LG GGFG+VY GK  DG
Sbjct: 276 DKQEEGLQGL--GNLRSFTFRELHVYTDGFSSKNILGAGGFGNVYRGKLGDG 325

BLAST of CsaV3_1G031210 vs. TAIR 10
Match: AT1G01540.1 (Protein kinase superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0

Query: 29  RMYTYKELHAATNGFHDDNKLGEGGFGSVYWGKTTDGLQM 69
           R YT +EL AATNG  ++N +GEGG+G VY G  TDG ++
Sbjct: 140 RWYTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKV 179

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN65415.13.2e-42100.00hypothetical protein Csa_020118 [Cucumis sativus][more]
XP_004146351.18.7e-3298.53PTI1-like tyrosine-protein kinase At3g15890 [Cucumis sativus][more]
KAA0064001.11.4e-2690.14PTI1-like tyrosine-protein kinase [Cucumis melo var. makuwa][more]
XP_008453646.11.4e-2691.43PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Cucumis melo][more]
TYK09477.11.9e-2692.75PTI1-like tyrosine-protein kinase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q9LSC24.0e-1150.75PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=A... [more]
Q9C6K95.0e-0653.85LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=A... [more]
P851936.5e-0636.36Putative serine/threonine-protein kinase (Fragment) OS=Helianthus annuus OX=4232... [more]
Q8VYT31.5e-0548.08Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidop... [more]
Q3EDL41.9e-0555.00Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=37... [more]
Match NameE-valueIdentityDescription
A0A0A0LU141.5e-42100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G418810 PE=4 SV=1[more]
A0A5A7VE427.0e-2790.14PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A1S3BWV27.0e-2791.43PTI1-like tyrosine-protein kinase At3g15890 OS=Cucumis melo OX=3656 GN=LOC103494... [more]
A0A5D3CBW69.1e-2792.75PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A6J1JMI53.0e-2276.47PTI1-like tyrosine-protein kinase At3g15890 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
Match NameE-valueIdentityDescription
AT1G52540.15.7e-1355.38Protein kinase superfamily protein [more]
AT3G15890.12.8e-1250.75Protein kinase superfamily protein [more]
AT1G25390.13.6e-0753.85Protein kinase superfamily protein [more]
AT4G30520.11.0e-0648.08Leucine-rich repeat protein kinase family protein [more]
AT1G01540.11.4e-0655.00Protein kinase superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.200.20Phosphorylase Kinase; domain 1coord: 12..70
e-value: 2.7E-11
score: 45.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR47989:SF20PTI1-LIKE TYROSINE-PROTEIN KINASEcoord: 1..69
NoneNo IPR availablePANTHERPTHR47989OS01G0750732 PROTEINcoord: 1..69
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 19..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G031210.1CsaV3_1G031210.1mRNA