CsaV3_1G031210 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCCTCTTTCAGTTGCTGTGATTCTGAGAAAGTAGACCGACAACGGTGATTTCTTCATCTCTGATCTTCAATTATGGGCTTTAGTTAATTTTATTGCTTTTTGGGATGGGTTTATTAATTTGTGTTTTTGGGGAAAATTAAGGTTGGGTAGTAGTGGTTTCAACAGTAGTTCATGGAGGATGTATACATACAAGGAGTTGCATGCGGCAACTAATGGTTTCCATGATGATAACAAACTGGGAGAAGGTGGATTTGGAAGTGTTTACTGGGGAAAGACTACTGATGGCCTTCAGGTAACTTAAATTGTTTTTTTTTTTTTGTGTATATTTGTTTTATTCATTATTAAAAGTTGGTGCTTGGATCTCATTCGATTTAGATGATACTGTTATGGGCCTTTGGACTTTGTCCACTTCAATACTTTAGTTAG ATGGGATCCTCTTTCAGTTGCTGTGATTCTGAGAAAGTAGACCGACAACGGTTGGGTAGTAGTGGTTTCAACAGTAGTTCATGGAGGATGTATACATACAAGGAGTTGCATGCGGCAACTAATGGTTTCCATGATGATAACAAACTGGGAGAAGGTGGATTTGGAAGTGTTTACTGGGGAAAGACTACTGATGGCCTTCAGATGATACTGTTATGGGCCTTTGGACTTTGTCCACTTCAATACTTTAGTTAG ATGGGATCCTCTTTCAGTTGCTGTGATTCTGAGAAAGTAGACCGACAACGGTTGGGTAGTAGTGGTTTCAACAGTAGTTCATGGAGGATGTATACATACAAGGAGTTGCATGCGGCAACTAATGGTTTCCATGATGATAACAAACTGGGAGAAGGTGGATTTGGAAGTGTTTACTGGGGAAAGACTACTGATGGCCTTCAGATGATACTGTTATGGGCCTTTGGACTTTGTCCACTTCAATACTTTAGTTAG MGSSFSCCDSEKVDRQRLGSSGFNSSSWRMYTYKELHAATNGFHDDNKLGEGGFGSVYWGKTTDGLQMILLWAFGLCPLQYFS* Homology
BLAST of CsaV3_1G031210 vs. NCBI nr
Match: KGN65415.1 (hypothetical protein Csa_020118 [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 3.2e-42 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. NCBI nr
Match: XP_004146351.1 (PTI1-like tyrosine-protein kinase At3g15890 [Cucumis sativus]) HSP 1 Score: 146.7 bits (369), Expect = 8.7e-32 Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. NCBI nr
Match: KAA0064001.1 (PTI1-like tyrosine-protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26 Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. NCBI nr
Match: XP_008453646.1 (PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Cucumis melo]) HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26 Identity = 64/70 (91.43%), Postives = 65/70 (92.86%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. NCBI nr
Match: TYK09477.1 (PTI1-like tyrosine-protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 129.0 bits (323), Expect = 1.9e-26 Identity = 64/69 (92.75%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. ExPASy Swiss-Prot
Match: Q9LSC2 (PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.0e-11 Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. ExPASy Swiss-Prot
Match: Q9C6K9 (LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-1.1 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 5.0e-06 Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. ExPASy Swiss-Prot
Match: P85193 (Putative serine/threonine-protein kinase (Fragment) OS=Helianthus annuus OX=4232 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 6.5e-06 Identity = 24/66 (36.36%), Postives = 37/66 (56.06%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. ExPASy Swiss-Prot
Match: Q8VYT3 (Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-05 Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. ExPASy Swiss-Prot
Match: Q3EDL4 (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2) HSP 1 Score: 49.7 bits (117), Expect = 1.9e-05 Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. ExPASy TrEMBL
Match: A0A0A0LU14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G418810 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.5e-42 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. ExPASy TrEMBL
Match: A0A5A7VE42 (PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold117G00060 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 7.0e-27 Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. ExPASy TrEMBL
Match: A0A1S3BWV2 (PTI1-like tyrosine-protein kinase At3g15890 OS=Cucumis melo OX=3656 GN=LOC103494300 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 7.0e-27 Identity = 64/70 (91.43%), Postives = 65/70 (92.86%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. ExPASy TrEMBL
Match: A0A5D3CBW6 (PTI1-like tyrosine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00750 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 9.1e-27 Identity = 64/69 (92.75%), Postives = 64/69 (92.75%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. ExPASy TrEMBL
Match: A0A6J1JMI5 (PTI1-like tyrosine-protein kinase At3g15890 OS=Cucurbita maxima OX=3661 GN=LOC111485734 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.0e-22 Identity = 52/68 (76.47%), Postives = 60/68 (88.24%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. TAIR 10
Match: AT1G52540.1 (Protein kinase superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 5.7e-13 Identity = 36/65 (55.38%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. TAIR 10
Match: AT3G15890.1 (Protein kinase superfamily protein ) HSP 1 Score: 68.6 bits (166), Expect = 2.8e-12 Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. TAIR 10
Match: AT1G25390.1 (Protein kinase superfamily protein ) HSP 1 Score: 51.6 bits (122), Expect = 3.6e-07 Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. TAIR 10
Match: AT4G30520.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06 Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of CsaV3_1G031210 vs. TAIR 10
Match: AT1G01540.1 (Protein kinase superfamily protein ) HSP 1 Score: 49.7 bits (117), Expect = 1.4e-06 Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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