CsaV3_1G030970 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G030970
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 17994905 .. 17995093 (-)
RNA-Seq ExpressionCsaV3_1G030970
SyntenyCsaV3_1G030970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCTGATAGAAATCTCCATTATCGAGAGGGGATTGTTTTGACCCGCCAAATGGATGGCTCCTCCACGTGGCCTCTCTTCCTCTCTTCAGAAGATGAAGCTGGTTTTCTACGCTTCCTTTCCTCTTTGGATTTTCTTTCGCTTCTGCCCATTCCAAAATTGAACGAAGATCGTAAAATTTGGTGA

mRNA sequence

ATGGAATCTGATAGAAATCTCCATTATCGAGAGGGGATTGTTTTGACCCGCCAAATGGATGGCTCCTCCACGTGGCCTCTCTTCCTCTCTTCAGAAGATGAAGCTGGTTTTCTACGCTTCCTTTCCTCTTTGGATTTTCTTTCGCTTCTGCCCATTCCAAAATTGAACGAAGATCGTAAAATTTGGTGA

Coding sequence (CDS)

ATGGAATCTGATAGAAATCTCCATTATCGAGAGGGGATTGTTTTGACCCGCCAAATGGATGGCTCCTCCACGTGGCCTCTCTTCCTCTCTTCAGAAGATGAAGCTGGTTTTCTACGCTTCCTTTCCTCTTTGGATTTTCTTTCGCTTCTGCCCATTCCAAAATTGAACGAAGATCGTAAAATTTGGTGA

Protein sequence

MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRKIW*
Homology
[Close]
BLAST of CsaV3_1G030970 vs. NCBI nr
Match: KGN65389.1 (hypothetical protein Csa_019750 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 2.2e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK 60
          MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK
Sbjct: 1  MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK 60

Query: 61 IW 63
          IW
Sbjct: 61 IW 62

[Close]
BLAST of CsaV3_1G030970 vs. ExPASy TrEMBL
Match: A0A0A0LWM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G399660 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK 60
          MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK
Sbjct: 1  MESDRNLHYREGIVLTRQMDGSSTWPLFLSSEDEAGFLRFLSSLDFLSLLPIPKLNEDRK 60

Query: 61 IW 63
          IW
Sbjct: 61 IW 62

The following BLAST results are available for this feature:
BLAST of CsaV3_1G030970 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65389.12.2e-27100.00hypothetical protein Csa_019750 [Cucumis sativus][more]
BLAST of CsaV3_1G030970 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G030970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWM81.1e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G399660 PE=4 SV=1[more]
BLAST of CsaV3_1G030970 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G030970.1CsaV3_1G030970.1mRNA