CsaV3_1G029540 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGTTTTTGGACTTGGGGTATTTGGGTAATTGTCCAAAATAAAACCCCAAAACCGGAAATTGGTTAAACCTCAAGCAGCCGGATCGAGTTCGTCTGAACGCTGCAGACTAATGACCTACGCTGCGGATTCAAGATGGTCGACGGCCGCCATGAGCGTCACGCTGGCGTTTATCTCTGCCTCCGCCATCATATCTCGTAAAACTTCGAAACTTTTTTTTAGATCATATATGTCCTCTTTCTTAGTTTCTCCGATTTCCGATTTGTTTCTTACAATTAAAGTTTTGTTGTTTTCCCCAGTTTATCTTGTGACAAAGAAGTCCAGAGAGTTGGGTACCAAGGTTCGACAGCTCGAGGCTTCTCTAGCAGCTTCATTAAAAAAAACCGCCGCCGAGAGACAAGGCCGAATACGGGCACAGCAGGTACTTCATATCATTTGCTCTTCTGCATCGCTTCATGTTCCAGTGTTGTTATTTGATATCTTGGTTTCAATTTTCTCCCTACTTTAGGCTTTAAGGAAAGCAGTTGCGGAACCCAAGTCTGATAGTGTGAAATGTACTTCATATCCCATGACGCCAATCGGTACTATCCAATCATCCTTCACTACCAGGTTAGTTTTTTTATTGCATTATCTGGTAGTTGAAACATGAATTTTTGGGTCGTTGTTTTCTCATTTTTCTGTTCATAAAGCTAATGTCAAAAGTGGATATGTGTGAGCCATATTCTTCAGTTAGCTGTAAAAATCGAACAATCAATAACCTTTTTTGGGGGTTTTCTTTTTAGGAATGGGACTCCAAGGCAATCTTTGCTCGTACCTCTTGCAAGGGCACGGCTGGTGTTTTCTGCTCGCATTCCCCCAGCTTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGGTCATATATGTCTTTCATTTGAACACAGATCTTGACAAGTTGTGGAAGGATCCATCGAAATCAAAATTCAAGGCCAAAGTACGTTTTCTTCATTAGTTGATGCTCCTTCAATGTGGAACTCATATTTTTATTATTCTTATAATTTCCTAAAATCCCATAAAAGGACAGCTCAATGGTAGGTTAGAGTACCGAGGTTGAAAGGCGAAAGAGTAGGAGTCTTTGCTACGAGATCTCCACATAGACCATGCCCAATCGGACTTACTGTTGCAAAGGTAAGATAATTTTTTTTAGTGCTGTCGATGTGTCTTGCAAGTTTATGGAGAAGCCCATGGTAGATCACAGACGTGGATGAAATGTGTCTTCCCCTAACGAGTTCTAGATGGGTTTTGCTGTCACATGAACATGGTCCAACATGTTTTGTATGGTTAGGCTGAAATGTCATTTAATTTAGTATTAGAAATTCATGGTTACAAGCTTGCAGTTGTTGTAACTTGCAAGTGTTAGACAGCATTCAGATGCAACAAATAAATGGGGGAATATTAAATCTAAGATTAATAGATCTGCTATGTTACCAATTCAGGTGGAGGCTGTCCAGGGACATGAAATTCTACTCTCTGGTGCCGACCTTGTTGATGGAACTGTAAGAGTTCGTTTTCAATTTTTCTTACCACGAAAAAGGTCTAGTTGAATTTATACGTTACTTCTTGGGGTAATGATTGTTATGATTTCTTGCTTTTTTTGAATTTTGTTACAGCCAGTACTTGATGTTAAACCTTATCTACCATACTGTGACAGTGTCCAAAATGCAACAGTCCCAAAGTGGTTACTGGTATGTCTTCAAGAATTAATTTCTATGACTAAACGTTATTTTAGAATTTCCTCGATGCTTATGTTATTGCTATTCATCGTTTAAATTGTTTTTTATGTTTTAGTTTTTGGCAACTATTCTTTCAGTCTGTCCCAACGAAGATTTATTCTGAATGTTGTGCTTTTCAAACTTCTCTTATGCATGGCATATGTGATATGACTAGTTGTGTGCAAATAACTTAAGAAATTCAGCTTTCCATATACTATTAGGTTTTTGTCCTACTCTCATATTTGGAGTTATACGCTGTGACCATGTAATATGTTTATGTACATTCCTCTTGGCATTCTTACATGTTATTTACGCCAACACAGGGGGACAATGTATTGACTGTTGCGTCCATTTGCTTCTCTGAAGAATTTACGTCCACTCTATCCAAGTGTTGGCCACTAACGGTGAGTTCCTTTTTCTTTTTCTTTATAATTAATTGATCATTGTTGTTTCATAATCATCATTATTATTGTTACTACTACATAGATATTCATTAGTGTTTGGGCCAACTTGGAATATTCGACAATATGCCAGAAATATTCTCTGATTGTTTTGCACAGGACATGGTAAAATCAATACACAACAATATTTTACTTAGCGTGCATAAGTTTTCCTTAAAATTTTGGGTATTGGAAAGGTGTAATGTAAAATCAAGAATCTAGTTTCTTTGGTTTCAAAAGGCACTTTTCAAATTGCTATATTTTATACCTGAAGGGGAGGGGAGGGGAGGGACGGGACGTCCTTGCTGGAGTTTTGGGTCATAATCAGCCTTAGGTTGGTCCTCTGATAGAAAACTTAATAAAAGTGAAAGCCTTTGTTGTCTTCTGGTGATATTGTAGCACAAGGAGTCTAAATGCCTAAAGATAATTACGCCTCTGGAATTTTACATTATGAACGTTGGGAGAGCGGCTGCTTTGTAGTCTGATTACCATTTTTGTGAAACTCCACGTTACAAAGAGCTAATGCTCTCAACTTTCATATGGTACAAAGTAGGATATTCTGGATGGGGTATGCCATTTAGGGGTGTTTAGTGGTTCGTAATGGGATGGGTTTGTAATGTAATGTAATCCAAAATCCATATTTAGATAGAGTGTTTTGGACTCAACTTATAATACAAACTTCATTCTGCTTAATAGTTTTCAATCCAACGTTCTCTCTCCCTGGTCTCATTTCTAACACTCATTTTTTATTTTTTATTTTCAGTAATGTAATCAGTCCAACTGTCTAAATAACTCTTTAATTTTTTCTTTGGTTTCCATCATTTTGCCACATAAATTTCTCACGCATCATATTTTGTTGGTTTCAGGAAAAGAAATCACTTTATGCGTCGGAAGATGAATTGAAAAACTTTGTGAAACAGGTGCTTTCTTGGGATATTCGATCAGTGTCTCAACGAAGTCGACCTCATTGCTCTCACATTAAGACGGATTCAGATGATAGTTCAGATTCAGATGGTCACCTAAATGACAAAGTTTCGAGTAGTTCACAAAGTTCTTCAAAGAGCACAATCTATCACCTACTTGTAGATGGCTTAGATGTTTCATACACAATTGGTTGCCATGGGGACGTGGTTGTGGACAAAGTGGAACTTGCATCATCTAGCTCGAGAACAAGAAGCAATTAACACAAAGCAAATTCTTCCGAATAGGCAAATCAGGGTTGTCTTATTACTAACCTTGCATTGCTACAATTAAAAGGATCCCCTATCTTGGAAATTTTCCCTTGAAATTATACTGCCTTGAATGGAGCTTGATCTTGCTCATCTTTCTGTCAGAAACAAACTGTAGGTTGAAACTGAGACTAGAATGCTGGATAAATTATGAGTTAAATGGTTTTGGTTGAAAAGCAGCTGTTTGCTTACGAATGAATCTTTGACTTTTATACCACAATCTTAAAACAAGAAAAGGATATGTTTGTGACCTCTGTACTCCAGGAGTAGCACAAGTGACTAGGTCACTATAGGCTGAACTGATTCACGTTTGGTTTGGATTTTGCTGTTTTTCATTTTTAGTTTAAAAAATTCTTTGCTTAGGTTTCTTTCTCTCTCTCTCTTAATTGAAAAAACAACTTTTCAATCATTTGCCCGAATGATCTTAATGTCACTTTTAGAGAATATTTT ATGACCTACGCTGCGGATTCAAGATGGTCGACGGCCGCCATGAGCGTCACGCTGGCGTTTATCTCTGCCTCCGCCATCATATCTCTTTATCTTGTGACAAAGAAGTCCAGAGAGTTGGGTACCAAGGTTCGACAGCTCGAGGCTTCTCTAGCAGCTTCATTAAAAAAAACCGCCGCCGAGAGACAAGGCCGAATACGGGCACAGCAGGCTTTAAGGAAAGCAGTTGCGGAACCCAAGTCTGATAGTGTGAAATGTACTTCATATCCCATGACGCCAATCGGTACTATCCAATCATCCTTCACTACCAGGAATGGGACTCCAAGGCAATCTTTGCTCGTACCTCTTGCAAGGGCACGGCTGGTGTTTTCTGCTCGCATTCCCCCAGCTTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGGTCATATATGTCTTTCATTTGAACACAGATCTTGACAAGTTGTGGAAGGATCCATCGAAATCAAAATTCAAGGCCAAAGTTAGAGTACCGAGGTTGAAAGGCGAAAGAGTAGGAGTCTTTGCTACGAGATCTCCACATAGACCATGCCCAATCGGACTTACTGTTGCAAAGGTGGAGGCTGTCCAGGGACATGAAATTCTACTCTCTGGTGCCGACCTTGTTGATGGAACTCCAGTACTTGATGTTAAACCTTATCTACCATACTGTGACAGTGTCCAAAATGCAACAGTCCCAAAGTGGTTACTGGGGGACAATGTATTGACTGTTGCGTCCATTTGCTTCTCTGAAGAATTTACGTCCACTCTATCCAAGTGTTGGCCACTAACGGAAAAGAAATCACTTTATGCGTCGGAAGATGAATTGAAAAACTTTGTGAAACAGGTGCTTTCTTGGGATATTCGATCAGTGTCTCAACGAAGTCGACCTCATTGCTCTCACATTAAGACGGATTCAGATGATAGTTCAGATTCAGATGGTCACCTAAATGACAAAGTTTCGAGTAGTTCACAAAGTTCTTCAAAGAGCACAATCTATCACCTACTTGTAGATGGCTTAGATGTTTCATACACAATTGGTTGCCATGGGGACGTGGTTGTGGACAAAGTGGAACTTGCATCATCTAGCTCGAGAACAAGAAGCAATTAA ATGACCTACGCTGCGGATTCAAGATGGTCGACGGCCGCCATGAGCGTCACGCTGGCGTTTATCTCTGCCTCCGCCATCATATCTCTTTATCTTGTGACAAAGAAGTCCAGAGAGTTGGGTACCAAGGTTCGACAGCTCGAGGCTTCTCTAGCAGCTTCATTAAAAAAAACCGCCGCCGAGAGACAAGGCCGAATACGGGCACAGCAGGCTTTAAGGAAAGCAGTTGCGGAACCCAAGTCTGATAGTGTGAAATGTACTTCATATCCCATGACGCCAATCGGTACTATCCAATCATCCTTCACTACCAGGAATGGGACTCCAAGGCAATCTTTGCTCGTACCTCTTGCAAGGGCACGGCTGGTGTTTTCTGCTCGCATTCCCCCAGCTTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGGTCATATATGTCTTTCATTTGAACACAGATCTTGACAAGTTGTGGAAGGATCCATCGAAATCAAAATTCAAGGCCAAAGTTAGAGTACCGAGGTTGAAAGGCGAAAGAGTAGGAGTCTTTGCTACGAGATCTCCACATAGACCATGCCCAATCGGACTTACTGTTGCAAAGGTGGAGGCTGTCCAGGGACATGAAATTCTACTCTCTGGTGCCGACCTTGTTGATGGAACTCCAGTACTTGATGTTAAACCTTATCTACCATACTGTGACAGTGTCCAAAATGCAACAGTCCCAAAGTGGTTACTGGGGGACAATGTATTGACTGTTGCGTCCATTTGCTTCTCTGAAGAATTTACGTCCACTCTATCCAAGTGTTGGCCACTAACGGAAAAGAAATCACTTTATGCGTCGGAAGATGAATTGAAAAACTTTGTGAAACAGGTGCTTTCTTGGGATATTCGATCAGTGTCTCAACGAAGTCGACCTCATTGCTCTCACATTAAGACGGATTCAGATGATAGTTCAGATTCAGATGGTCACCTAAATGACAAAGTTTCGAGTAGTTCACAAAGTTCTTCAAAGAGCACAATCTATCACCTACTTGTAGATGGCTTAGATGTTTCATACACAATTGGTTGCCATGGGGACGTGGTTGTGGACAAAGTGGAACTTGCATCATCTAGCTCGAGAACAAGAAGCAATTAA MTYAADSRWSTAAMSVTLAFISASAIISLYLVTKKSRELGTKVRQLEASLAASLKKTAAERQGRIRAQQALRKAVAEPKSDSVKCTSYPMTPIGTIQSSFTTRNGTPRQSLLVPLARARLVFSARIPPASIEGLGEYSHCWVIYVFHLNTDLDKLWKDPSKSKFKAKVRVPRLKGERVGVFATRSPHRPCPIGLTVAKVEAVQGHEILLSGADLVDGTPVLDVKPYLPYCDSVQNATVPKWLLGDNVLTVASICFSEEFTSTLSKCWPLTEKKSLYASEDELKNFVKQVLSWDIRSVSQRSRPHCSHIKTDSDDSSDSDGHLNDKVSSSSQSSSKSTIYHLLVDGLDVSYTIGCHGDVVVDKVELASSSSRTRSN* Homology
BLAST of CsaV3_1G029540 vs. NCBI nr
Match: XP_004149885.1 (uncharacterized protein LOC101219357 [Cucumis sativus] >KGN65285.1 hypothetical protein Csa_019626 [Cucumis sativus]) HSP 1 Score: 726.9 bits (1875), Expect = 9.1e-206 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. NCBI nr
Match: TYK09463.1 (tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 681.4 bits (1757), Expect = 4.4e-192 Identity = 356/380 (93.68%), Postives = 365/380 (96.05%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. NCBI nr
Match: XP_008453657.1 (PREDICTED: tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Cucumis melo]) HSP 1 Score: 677.2 bits (1746), Expect = 8.3e-191 Identity = 354/380 (93.16%), Postives = 364/380 (95.79%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. NCBI nr
Match: XP_038879626.1 (tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Benincasa hispida]) HSP 1 Score: 655.2 bits (1689), Expect = 3.4e-184 Identity = 335/380 (88.16%), Postives = 361/380 (95.00%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. NCBI nr
Match: KAA0059728.1 (tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 639.8 bits (1649), Expect = 1.5e-179 Identity = 334/373 (89.54%), Postives = 349/373 (93.57%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. ExPASy Swiss-Prot
Match: Q9BU70 (tRNA (adenine(37)-N6)-methyltransferase OS=Homo sapiens OX=9606 GN=TRMO PE=1 SV=2) HSP 1 Score: 141.4 bits (355), Expect = 2.2e-32 Identity = 73/151 (48.34%), Postives = 96/151 (63.58%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. ExPASy Swiss-Prot
Match: Q562D6 (tRNA (adenine(37)-N6)-methyltransferase OS=Mus musculus OX=10090 GN=Trmo PE=2 SV=2) HSP 1 Score: 141.4 bits (355), Expect = 2.2e-32 Identity = 73/150 (48.67%), Postives = 97/150 (64.67%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. ExPASy Swiss-Prot
Match: Q4V7E0 (tRNA (adenine(37)-N6)-methyltransferase OS=Rattus norvegicus OX=10116 GN=Trmo PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 6.9e-31 Identity = 70/147 (47.62%), Postives = 95/147 (64.63%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. ExPASy Swiss-Prot
Match: Q9RPT0 (Putative S-adenosylmethionine-dependent methyltransferase RcsF OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rcsF PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.8e-26 Identity = 67/155 (43.23%), Postives = 95/155 (61.29%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. ExPASy Swiss-Prot
Match: O68638 (Putative S-adenosylmethionine-dependent methyltransferase RcsF OS=Pseudomonas aeruginosa OX=287 GN=rcsF PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.3e-24 Identity = 65/155 (41.94%), Postives = 93/155 (60.00%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. ExPASy TrEMBL
Match: A0A0A0LTM6 (TsaA-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G295140 PE=4 SV=1) HSP 1 Score: 726.9 bits (1875), Expect = 4.4e-206 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. ExPASy TrEMBL
Match: A0A5D3CC84 (tRNA (Adenine(37)-N6)-methyltransferase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00580 PE=4 SV=1) HSP 1 Score: 681.4 bits (1757), Expect = 2.1e-192 Identity = 356/380 (93.68%), Postives = 365/380 (96.05%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. ExPASy TrEMBL
Match: A0A1S3BW92 (tRNA (Adenine(37)-N6)-methyltransferase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494312 PE=4 SV=1) HSP 1 Score: 677.2 bits (1746), Expect = 4.0e-191 Identity = 354/380 (93.16%), Postives = 364/380 (95.79%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. ExPASy TrEMBL
Match: A0A5A7UX01 (tRNA (Adenine(37)-N6)-methyltransferase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold551G00040 PE=4 SV=1) HSP 1 Score: 639.8 bits (1649), Expect = 7.1e-180 Identity = 334/373 (89.54%), Postives = 349/373 (93.57%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. ExPASy TrEMBL
Match: A0A6J1BYL5 (uncharacterized protein LOC111006924 OS=Momordica charantia OX=3673 GN=LOC111006924 PE=4 SV=1) HSP 1 Score: 628.2 bits (1619), Expect = 2.1e-176 Identity = 320/380 (84.21%), Postives = 351/380 (92.37%), Query Frame = 0
BLAST of CsaV3_1G029540 vs. TAIR 10
Match: AT4G28020.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0066 (InterPro:IPR001378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 394.8 bits (1013), Expect = 7.7e-110 Identity = 201/357 (56.30%), Postives = 264/357 (73.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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