CsaV3_1G029350 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G029350
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	glycine-rich cell wall structural protein 2-like
Location	chr1: 16128593 .. 16129690 (-)
RNA-Seq Expression	CsaV3_1G029350
Synteny	CsaV3_1G029350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGCACCTACCGGCCTCCACTTCAAATTAATAATATTAAAACATTTGTCCAAACGCCATAATCTTCAAACAATTTTGGGCAAATTCTTAGCCACATAATTTGCCCTCCGCAATCTTTTTCTCTCTTTTGTAGTGGCCACTTCATCGTACCATTTCACAAAGGGTCCTATCATCTTCAACAAATTTTGCTATAAATACCTCCCTCAAGTCTCTCCATTAATTCCCACATCACAAACCTTTTAAACTCTAAAACCTAGAGAAGCTTTAACACAGTCCCCCGATTGTTTTATTCTGTTTAAGACAATAATGGCTTCAATCAAGTCCCTTGCTATTGTTGTTTGCCTTCTACTCTCTTTTTCTGCCATTCTTTCTGAAGGTCGAGTGGCAAGAAAGGATCTCGGTATTGACCTTGGAGGAGTCGGAGTTGGACTTGGAACTGGAATTGGCTTAGGCATTGGTGGAAGTGGCTCTGGTTCTGGTTCTGGCTCTGGCTCTGGCTCTGGCTCTGGCTCAAGTTCATCCTCATCATCATACTCTTCGAGCTCAAGCTCGGGGTCTGGAGCTGGGTCTGAAGCTGGTTCTTACGCTGGATCATACGCAGGGTCACGAGCAGGCTCAGGTTCAGGTGGAAATAGGAATGGAGGGTCGGGATATGGTTCGGGATATGGTGGAGGTTCGGGCAGAGGAGGAGGCAGCAACGACAATGGTGAAGGATATGGTGAAGGTCATGGCTACGGGGAGGGTCGTGGATATGGGGGAGGAAACTGAAGAGAGAAGAAAAAAAAAAAAAAAAGATAAGAGGACGTATAAGAAAAGTATTAGGTTACGTAGTTGATTTAGGTCATGATCCTAACTTTATGTATTTAAATAAAAATAAGGGAAGATGGAAGCTTGTTTAGTAGTGTGTGTTTTAGCGGTCATGAAAATATTGTTGGTAGAACAAGTGTGATGGATTTTCAAGGTGTTTCTTGCTTTTAGCCAATTTCATGTGTATGTTAATGTTTTACTATATATTATATGCTAAATATAGTTTTCTTTTTAAATCTCCCCTATATTGTTTTCACACTATAAATAAAATAAAATGTTGGTTAATATTT

mRNA sequence

ATGGCTTCAATCAAGTCCCTTGCTATTGTTGTTTGCCTTCTACTCTCTTTTTCTGCCATTCTTTCTGAAGGTCGAGTGGCAAGAAAGGATCTCGGTATTGACCTTGGAGGAGTCGGAGTTGGACTTGGAACTGGAATTGGCTTAGGCATTGGTGGAAGTGGCTCTGGTTCTGGTTCTGGCTCTGGCTCTGGCTCTGGCTCTGGCTCAAGTTCATCCTCATCATCATACTCTTCGAGCTCAAGCTCGGGGTCTGGAGCTGGGTCTGAAGCTGGTTCTTACGCTGGATCATACGCAGGGTCACGAGCAGGCTCAGGTTCAGGTGGAAATAGGAATGGAGGGTCGGGATATGGTTCGGGATATGGTGGAGGTTCGGGCAGAGGAGGAGGCAGCAACGACAATGGTGAAGGATATGGTGAAGGTCATGGCTACGGGGAGGGTCGTGGATATGGGGGAGGAAACTGA

Coding sequence (CDS)

ATGGCTTCAATCAAGTCCCTTGCTATTGTTGTTTGCCTTCTACTCTCTTTTTCTGCCATTCTTTCTGAAGGTCGAGTGGCAAGAAAGGATCTCGGTATTGACCTTGGAGGAGTCGGAGTTGGACTTGGAACTGGAATTGGCTTAGGCATTGGTGGAAGTGGCTCTGGTTCTGGTTCTGGCTCTGGCTCTGGCTCTGGCTCTGGCTCAAGTTCATCCTCATCATCATACTCTTCGAGCTCAAGCTCGGGGTCTGGAGCTGGGTCTGAAGCTGGTTCTTACGCTGGATCATACGCAGGGTCACGAGCAGGCTCAGGTTCAGGTGGAAATAGGAATGGAGGGTCGGGATATGGTTCGGGATATGGTGGAGGTTCGGGCAGAGGAGGAGGCAGCAACGACAATGGTGAAGGATATGGTGAAGGTCATGGCTACGGGGAGGGTCGTGGATATGGGGGAGGAAACTGA

Protein sequence

MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN*

Homology

[Close]

BLAST of CsaV3_1G029350 vs. NCBI nr
Match: XP_004146660.2 (glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN65265.1 hypothetical protein Csa_020101 [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 3.3e-53
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
           MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG
Sbjct: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60

Query: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
           SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY
Sbjct: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120

Query: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 154
           GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
Sbjct: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 153

[Close]

BLAST of CsaV3_1G029350 vs. NCBI nr
Match: XP_008443813.1 (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 4.2e-48
Identity = 145/153 (94.77%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
           MASIKSLA+VVCLLLSFS  LSEGRVARKDLGIDLGG+GVGLG GIGLGIGGSGSGSGSG
Sbjct: 1   MASIKSLALVVCLLLSFSVFLSEGRVARKDLGIDLGGLGVGLGAGIGLGIGGSGSGSGSG 60

Query: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
           SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY
Sbjct: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120

Query: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 154
           GGGSGR GGSN NGEGYGEGHGYGEG GYGGGN
Sbjct: 121 GGGSGR-GGSNGNGEGYGEGHGYGEGHGYGGGN 152

[Close]

BLAST of CsaV3_1G029350 vs. NCBI nr
Match: XP_038879748.1 (glycine-rich cell wall structural protein 2-like [Benincasa hispida])

HSP 1 Score: 171.4 bits (433), Expect = 6.1e-39
Identity = 134/153 (87.58%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
           MASIKSLA+VVC LLSFSAILSEGRVARKDLGIDLGGVGVGLG GIGLG+G    GSGSG
Sbjct: 1   MASIKSLAVVVCFLLSFSAILSEGRVARKDLGIDLGGVGVGLGAGIGLGLG----GSGSG 60

Query: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
           SGSGSGS SSSSS S SSSSSSGSGAGSEAGSYAGSYAGSRA  GSGGNRNGGSG G+GY
Sbjct: 61  SGSGSGSSSSSSSYSSSSSSSSGSGAGSEAGSYAGSYAGSRA--GSGGNRNGGSGSGTGY 120

Query: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 154
           GGGSGRGGG N  GEGYGEGHGYGEG GYGGGN
Sbjct: 121 GGGSGRGGG-NGGGEGYGEGHGYGEGHGYGGGN 146

[Close]

BLAST of CsaV3_1G029350 vs. NCBI nr
Match: XP_022921881.1 (cell wall protein IFF6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 164.1 bits (414), Expect = 9.7e-37
Identity = 136/171 (79.53%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
           MASI SL IVVC LLSFS ILS+ RVARKDLG+DLGG+GVG+GTGIGLG+GGSGSGSGSG
Sbjct: 1   MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSG 60

Query: 61  SGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSY----------------AGSYAGSRA 120
           SGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSY                AGSYAGSRA
Sbjct: 61  SGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRA 120

Query: 121 GSGSGGNRNGGSGYGSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 154
           GSGSG NRNGGSG GSGYGGGSGRG G N  GEGYGEGHGYGEGRGYGGGN
Sbjct: 121 GSGSGPNRNGGSGSGSGYGGGSGRGSG-NGGGEGYGEGHGYGEGRGYGGGN 169

[Close]

BLAST of CsaV3_1G029350 vs. NCBI nr
Match: XP_022921883.1 (putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata])

HSP 1 Score: 162.9 bits (411), Expect = 2.2e-36
Identity = 131/153 (85.62%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
           MASI SL IVVC LLSFS ILS+ RVARKDLG+DLGG+GVG+GTGIGLG+GGSGSGSGSG
Sbjct: 1   MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSG 60

Query: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
           SGSGSGSGSSSSSSS S SSSSGSG+G  AGS AGSYAGSRAGSGSG NRNGGSG GSGY
Sbjct: 61  SGSGSGSGSSSSSSSSSYSSSSGSGSG--AGSEAGSYAGSRAGSGSGPNRNGGSGSGSGY 120

Query: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 154
           GGGSGRG G N  GEGYGEGHGYGEGRGYGGGN
Sbjct: 121 GGGSGRGSG-NGGGEGYGEGHGYGEGRGYGGGN 149

[Close]

BLAST of CsaV3_1G029350 vs. ExPASy TrEMBL
Match: A0A0A0LTK9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G278500 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.6e-53
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
           MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG
Sbjct: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60

Query: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
           SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY
Sbjct: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120

Query: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 154
           GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN
Sbjct: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 153

[Close]

BLAST of CsaV3_1G029350 vs. ExPASy TrEMBL
Match: A0A1S3B9N0 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103487316 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.0e-48
Identity = 145/153 (94.77%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
           MASIKSLA+VVCLLLSFS  LSEGRVARKDLGIDLGG+GVGLG GIGLGIGGSGSGSGSG
Sbjct: 1   MASIKSLALVVCLLLSFSVFLSEGRVARKDLGIDLGGLGVGLGAGIGLGIGGSGSGSGSG 60

Query: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
           SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY
Sbjct: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120

Query: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 154
           GGGSGR GGSN NGEGYGEGHGYGEG GYGGGN
Sbjct: 121 GGGSGR-GGSNGNGEGYGEGHGYGEGHGYGGGN 152

[Close]

BLAST of CsaV3_1G029350 vs. ExPASy TrEMBL
Match: A0A6J1E2L1 (cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 4.7e-37
Identity = 136/171 (79.53%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
           MASI SL IVVC LLSFS ILS+ RVARKDLG+DLGG+GVG+GTGIGLG+GGSGSGSGSG
Sbjct: 1   MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSG 60

Query: 61  SGSGSGSG--SSSSSSSYSSSSSSGSGAGSEAGSY----------------AGSYAGSRA 120
           SGSGSGSG  SSSSSSSYSSSS SGSGAGSEAGSY                AGSYAGSRA
Sbjct: 61  SGSGSGSGSSSSSSSSSYSSSSGSGSGAGSEAGSYAGSRAGSGSGSGAGSEAGSYAGSRA 120

Query: 121 GSGSGGNRNGGSGYGSGYGGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 154
           GSGSG NRNGGSG GSGYGGGSGRG G N  GEGYGEGHGYGEGRGYGGGN
Sbjct: 121 GSGSGPNRNGGSGSGSGYGGGSGRGSG-NGGGEGYGEGHGYGEGRGYGGGN 169

[Close]

BLAST of CsaV3_1G029350 vs. ExPASy TrEMBL
Match: A0A6J1E521 (putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.0e-36
Identity = 131/153 (85.62%), Postives = 137/153 (89.54%), Query Frame = 0


Query: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
           MASI SL IVVC LLSFS ILS+ RVARKDLG+DLGG+GVG+GTGIGLG+GGSGSGSGSG
Sbjct: 1   MASINSL-IVVCFLLSFSVILSQARVARKDLGLDLGGLGVGIGTGIGLGLGGSGSGSGSG 60

Query: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
           SGSGSGSGSSSSSSS S SSSSGSG+G  AGS AGSYAGSRAGSGSG NRNGGSG GSGY
Sbjct: 61  SGSGSGSGSSSSSSSSSYSSSSGSGSG--AGSEAGSYAGSRAGSGSGPNRNGGSGSGSGY 120

Query: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 154
           GGGSGRG G N  GEGYGEGHGYGEGRGYGGGN
Sbjct: 121 GGGSGRGSG-NGGGEGYGEGHGYGEGRGYGGGN 149

[Close]

BLAST of CsaV3_1G029350 vs. ExPASy TrEMBL
Match: A0A6J1C497 (putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3673 GN=LOC111007250 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 6.3e-34
Identity = 125/153 (81.70%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
           MA+I+  A+V  +L   +AI+SE RVARKDLGIDLGGVGVGLG GIGLG GGSGSGSG+G
Sbjct: 1   MAAIRCFAVVAFILGLSAAIVSEARVARKDLGIDLGGVGVGLGAGIGLG-GGSGSGSGAG 60

Query: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNRNGGSGYGSGY 120
           +GSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNR  GSG GSGY
Sbjct: 61  AGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSGGNR--GSGSGSGY 120

Query: 121 GGGSGRGGGSNDNGEGYGEGHGYGEGRGYGGGN 154
           GGGSGRG     +GEGYGEGHGYGEG GYGGGN
Sbjct: 121 GGGSGRG-----SGEGYGEGHGYGEGHGYGGGN 145

[Close]

BLAST of CsaV3_1G029350 vs. TAIR 10
Match: AT4G30460.1 (glycine-rich protein )

HSP 1 Score: 104.4 bits (259), Expect = 8.5e-23
Identity = 102/156 (65.38%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 6   SLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSGSGSGS 65
           S  I++ L+L+ S ++SE RVARKDLG+DLGG+G G+G GIG+G GGSGSG+G+GSGSG 
Sbjct: 8   SSLILITLILATSVLVSESRVARKDLGLDLGGIGAGIGIGIGIGGGGSGSGAGAGSGSGG 67

Query: 66  GSGSSSSSSSYSSSSSSGSG---AGSEAGSYAGSYAGS----RAGSGSGGNRNGGSGYGS 125
           G  SSSSSSS SSSSSSG G   AGSEAGSYAGS+AGS    R+GSG G    GG G+G 
Sbjct: 68  GGSSSSSSSSSSSSSSSGGGGGDAGSEAGSYAGSHAGSGSGGRSGSGRGRGSGGGGGHGG 127

Query: 126 GYGGGSGR-GGGSNDNGEGYGEGHGYGEGRGYGGGN 154
           G GGG GR GGG + NGEGYGEG GY  G GYGGG+
Sbjct: 128 GGGGGGGRGGGGGSGNGEGYGEGGGY--GGGYGGGD 161

[Close]

BLAST of CsaV3_1G029350 vs. TAIR 10
Match: AT4G30450.1 (glycine-rich protein )

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-17
Identity = 71/107 (66.36%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MASIKSLAIVVCLLLSFSAILSEGRVARKDLGIDLGGVGVGLGTGIGLGIGGSGSGSGSG 60
           MA  + L ++  +++S   +L+E R+ARKDLGIDLGG+G+GLG G+G+G+GG GSGSG+G
Sbjct: 1   MAKAEGLFLLGLVVISSLVMLTESRLARKDLGIDLGGIGIGLGVGLGIGLGG-GSGSGAG 60

Query: 61  SGSGSGSGSSSSSSSYSSSSSSGSGAGSEAGSYAGSYAGSRAGSGSG 108
           +GSGSGSGS SSSSS SSSSSS SG+G  AGS AGS+AGSRAGSGSG
Sbjct: 61  AGSGSGSGSRSSSSSSSSSSSSSSGSGGSAGSSAGSFAGSRAGSGSG 106

The following BLAST results are available for this feature:

BLAST of CsaV3_1G029350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146660.2	3.3e-53	100.00	glycine-rich cell wall structural protein 2 [Cucumis sativus] >KGN65265.1 hypoth...	[more]
XP_008443813.1	4.2e-48	94.77	PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis melo]	[more]
XP_038879748.1	6.1e-39	87.58	glycine-rich cell wall structural protein 2-like [Benincasa hispida]	[more]
XP_022921881.1	9.7e-37	79.53	cell wall protein IFF6-like isoform X1 [Cucurbita moschata]	[more]
XP_022921883.1	2.2e-36	85.62	putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita mosch...	[more]

BLAST of CsaV3_1G029350 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G029350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTK9	1.6e-53	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G278500 PE=4 SV=1	[more]
A0A1S3B9N0	2.0e-48	94.77	glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1E2L1	4.7e-37	79.53	cell wall protein IFF6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1E521	1.0e-36	85.62	putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita mos...	[more]
A0A6J1C497	6.3e-34	81.70	putative glycine-rich cell wall structural protein 1 OS=Momordica charantia OX=3...	[more]

BLAST of CsaV3_1G029350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30460.1	8.5e-23	65.38	glycine-rich protein	[more]
AT4G30450.1	4.1e-17	66.36	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..89
None	No IPR available	PANTHER	PTHR38934	HYPHALLY REGULATED CELL WALL PROTEIN 1	coord: 1..153
None	No IPR available	PANTHER	PTHR38934:SF13	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1-RELATED	coord: 1..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G029350.1	CsaV3_1G029350.1	mRNA