CsaV3_1G028930 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G028930
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 15842628 .. 15843064 (+)
RNA-Seq ExpressionCsaV3_1G028930
SyntenyCsaV3_1G028930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTTGAGAGAGAGAGTCAACTTTTTGAAATCCAACCGCTCCATACTCTTTATTAATTCATCTTCTTCACCAAATCCAATAAATTTAAAATCCCATCTTCTTTTTCCGCCATTCTTCATTACCCAAATCATAGTTTTTCTCAGAAAAGTAAGGGAAAAAAAGAAAAGAAAAGGTATTTACAGATTATCAATTTCGTCTTTTTTCTTTTGTTTTCCTCTGTTTTTCAGCTCGAGAGTCGTGTAATTTTATATTTCAATTTGTTTTTTCTTTTATATTTGGAGCTTCTTGATCCTGTTGTTGGTTGTGTGTTCTCTTCTTATTTGATTATCTTTGGGTTGGTTTCTTTTCTAATTTTAGCTTGTTTCTGTTCTTTGTGTTTCTACGATTTTGCAGGAGAGATTATTCCTCTGTTTAGCGATATCTTGAGAAATTGA

mRNA sequence

ATGAAGTTGAGAGAGAGAGTCAACTTTTTGAAATCCAACCGCTCCATACTCTTTATTAATTCATCTTCTTCACCAAATCCAATAAATTTAAAATCCCATCTTCTTTTTCCGCCATTCTTCATTACCCAAATCATAGTTTTTCTCAGAAAAGTAAGGGAAAAAAAGAAAAGAAAAGGAGAGATTATTCCTCTGTTTAGCGATATCTTGAGAAATTGA

Coding sequence (CDS)

ATGAAGTTGAGAGAGAGAGTCAACTTTTTGAAATCCAACCGCTCCATACTCTTTATTAATTCATCTTCTTCACCAAATCCAATAAATTTAAAATCCCATCTTCTTTTTCCGCCATTCTTCATTACCCAAATCATAGTTTTTCTCAGAAAAGTAAGGGAAAAAAAGAAAAGAAAAGGAGAGATTATTCCTCTGTTTAGCGATATCTTGAGAAATTGA

Protein sequence

MKLRERVNFLKSNRSILFINSSSSPNPINLKSHLLFPPFFITQIIVFLRKVREKKKRKGEIIPLFSDILRN*
Homology
BLAST of CsaV3_1G028930 vs. NCBI nr
Match: KGN65158.1 (hypothetical protein Csa_019597 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 9.1e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1  MKLRERVNFLKSNRSILFINSSSSPNPINLKSHLLFPPFFITQIIVFLRKVREKKKRKGE 60
          MKLRERVNFLKSNRSILFINSSSSPNPINLKSHLLFPPFFITQIIVFLRKVREKKKRKGE
Sbjct: 1  MKLRERVNFLKSNRSILFINSSSSPNPINLKSHLLFPPFFITQIIVFLRKVREKKKRKGE 60

Query: 61 IIPLFSDILRN 72
          IIPLFSDILRN
Sbjct: 61 IIPLFSDILRN 71

BLAST of CsaV3_1G028930 vs. ExPASy TrEMBL
Match: A0A0A0LTQ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256180 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.4e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0

Query: 1  MKLRERVNFLKSNRSILFINSSSSPNPINLKSHLLFPPFFITQIIVFLRKVREKKKRKGE 60
          MKLRERVNFLKSNRSILFINSSSSPNPINLKSHLLFPPFFITQIIVFLRKVREKKKRKGE
Sbjct: 1  MKLRERVNFLKSNRSILFINSSSSPNPINLKSHLLFPPFFITQIIVFLRKVREKKKRKGE 60

Query: 61 IIPLFSDILRN 72
          IIPLFSDILRN
Sbjct: 61 IIPLFSDILRN 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN65158.19.1e-30100.00hypothetical protein Csa_019597 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LTQ04.4e-30100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G256180 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G028930.1CsaV3_1G028930.1mRNA