CsaV3_1G028580 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G028580
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Hydroxymethylbilane hydrolyase [cyclizing]
Location	chr1: 15560741 .. 15562166 (-)
RNA-Seq Expression	CsaV3_1G028580
Synteny	CsaV3_1G028580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGAGTATAATAGCACACATATTGACATAAAATTTTTAAATTTAGTTGTCAATATAGCTTAAAAGAAAAAACAAAGTGGTAAGGGATCAAAATAGCTTTTGAAAGTGAACTTTTTTAATGAATAAAAAAACGATGGATCTAAAGTATCTAATAGGCTAATTTTTACTTGAGATTGCTATAGTTTTTTCAATTTGGCCCAAATTATATTTTTAAAGATGGAAGGAAAAAGAAAAACTGTGACGGGGGAACTCCAAAAAATCACCAATGAGCACCGGCGCCGCGCATCCCAACGGCCCATTTCACCTCAATTCACTCACTTCATCTCCTTCTCCCGCCATCCCCACCCACTTCTCTCCGCGTACGGCCGCGTTCACGACGCCTCCAAACTATGCCGGCAGCCTCTCCCACCTCCTCTCTCTCAAAGGCTTTGAACCACTCTGGTGTCCCACCCTCACCGTCCAGCCCACTCCTCTCGCCATCAAATCTCATCTCCTTCCGCCCATTCTGCATTCCTTCTCCGCCGTCGCCTTCACGTCCCGCTCCGGCATTACAGCCCTCCTCGACGCTGCTACTGAAATTGGCGAGCCCTTGCTACCGTCCCACGGTGATACCTTCTTAATCGCAGCCCTAGGTAAGGACTCTGAGCTTCTCGACCATGAATTTCTTACCACAATTTGCCATAACACGAGTCGAATTAGAGTTGTGGTACCTGAAATTGCAACTCCAACTGGTTTAGTGGAAGCTCTTGGAGTTGGAAACCACCGTAGTGTTTTATGTCCGGTTCCTCGCGTGGTGGGACTGAACGAACCCCCGGTGGTTCCAAACTTCCTCCGTGACCTGGAGGCGAAAGGTTGGGTTCCGGTTCGCGTCGATGCTTACGAGACCCGATGGGCCGGACCCGATTGCGCGAGGAAGCTGGTGGAGAGAGGGAAGGATGAAAAATTGGATGCCATTGTGTTTACGAGTACTGGGGAAGTGGAGGGGCTGCTTAAAAGCTTGGCGCATTTGGGATTGGAGTGGGATGTGATGAAAAGGAGATGGCCGGAAATGGTAGTGGCTGCGCATGGGCCCGTGACAGCGGCTGGAGCTGAGAGACTCGGCGTTAAGGTTGATTTGGTGAGTTCTAAGTTTGATAGCTTCAATGGTGTGGTTGATGCTCTTCATTGGAGATGGCAGAACTTAGAATAGAACACTTTCTAAGTTCTAAAACATATCAAGTTCTTTACTGTAACTTCAATTGCCATTTTATATATGAACTTGACGCTGAATCATCTTCTTGTATATAATAATTTAGAAGGAATCGTTTCATCTTTATTCATTCGAACCAGCACTGTATGTTTTTTAATTGCTTTTGTTATCATCACCATGTGTATCATTATTGGCTTTCCCCTTTCGTTAATTGCAAATAATCTTCCATTTTGAGTT

mRNA sequence

ATGAGCACCGGCGCCGCGCATCCCAACGGCCCATTTCACCTCAATTCACTCACTTCATCTCCTTCTCCCGCCATCCCCACCCACTTCTCTCCGCGTACGGCCGCGTTCACGACGCCTCCAAACTATGCCGGCAGCCTCTCCCACCTCCTCTCTCTCAAAGGCTTTGAACCACTCTGGTGTCCCACCCTCACCGTCCAGCCCACTCCTCTCGCCATCAAATCTCATCTCCTTCCGCCCATTCTGCATTCCTTCTCCGCCGTCGCCTTCACGTCCCGCTCCGGCATTACAGCCCTCCTCGACGCTGCTACTGAAATTGGCGAGCCCTTGCTACCGTCCCACGGTGATACCTTCTTAATCGCAGCCCTAGGTAAGGACTCTGAGCTTCTCGACCATGAATTTCTTACCACAATTTGCCATAACACGAGTCGAATTAGAGTTGTGGTACCTGAAATTGCAACTCCAACTGGTTTAGTGGAAGCTCTTGGAGTTGGAAACCACCGTAGTGTTTTATGTCCGGTTCCTCGCGTGGTGGGACTGAACGAACCCCCGGTGGTTCCAAACTTCCTCCGTGACCTGGAGGCGAAAGGTTGGGTTCCGGTTCGCGTCGATGCTTACGAGACCCGATGGGCCGGACCCGATTGCGCGAGGAAGCTGGTGGAGAGAGGGAAGGATGAAAAATTGGATGCCATTGTGTTTACGAGTACTGGGGAAGTGGAGGGGCTGCTTAAAAGCTTGGCGCATTTGGGATTGGAGTGGGATGTGATGAAAAGGAGATGGCCGGAAATGGTAGTGGCTGCGCATGGGCCCGTGACAGCGGCTGGAGCTGAGAGACTCGGCGTTAAGGTTGATTTGGTGAGTTCTAAGTTTGATAGCTTCAATGGTGTGGTTGATGCTCTTCATTGGAGATGGCAGAACTTAGAATAG

Coding sequence (CDS)

ATGAGCACCGGCGCCGCGCATCCCAACGGCCCATTTCACCTCAATTCACTCACTTCATCTCCTTCTCCCGCCATCCCCACCCACTTCTCTCCGCGTACGGCCGCGTTCACGACGCCTCCAAACTATGCCGGCAGCCTCTCCCACCTCCTCTCTCTCAAAGGCTTTGAACCACTCTGGTGTCCCACCCTCACCGTCCAGCCCACTCCTCTCGCCATCAAATCTCATCTCCTTCCGCCCATTCTGCATTCCTTCTCCGCCGTCGCCTTCACGTCCCGCTCCGGCATTACAGCCCTCCTCGACGCTGCTACTGAAATTGGCGAGCCCTTGCTACCGTCCCACGGTGATACCTTCTTAATCGCAGCCCTAGGTAAGGACTCTGAGCTTCTCGACCATGAATTTCTTACCACAATTTGCCATAACACGAGTCGAATTAGAGTTGTGGTACCTGAAATTGCAACTCCAACTGGTTTAGTGGAAGCTCTTGGAGTTGGAAACCACCGTAGTGTTTTATGTCCGGTTCCTCGCGTGGTGGGACTGAACGAACCCCCGGTGGTTCCAAACTTCCTCCGTGACCTGGAGGCGAAAGGTTGGGTTCCGGTTCGCGTCGATGCTTACGAGACCCGATGGGCCGGACCCGATTGCGCGAGGAAGCTGGTGGAGAGAGGGAAGGATGAAAAATTGGATGCCATTGTGTTTACGAGTACTGGGGAAGTGGAGGGGCTGCTTAAAAGCTTGGCGCATTTGGGATTGGAGTGGGATGTGATGAAAAGGAGATGGCCGGAAATGGTAGTGGCTGCGCATGGGCCCGTGACAGCGGCTGGAGCTGAGAGACTCGGCGTTAAGGTTGATTTGGTGAGTTCTAAGTTTGATAGCTTCAATGGTGTGGTTGATGCTCTTCATTGGAGATGGCAGAACTTAGAATAG

Protein sequence

MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWCPTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIAALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLNEPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEGLLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALHWRWQNLE*

Homology

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BLAST of CsaV3_1G028580 vs. NCBI nr
Match: XP_011648476.1 (uncharacterized protein LOC105434481 [Cucumis sativus] >KGN65221.1 hypothetical protein Csa_019699 [Cucumis sativus])

HSP 1 Score: 629.0 bits (1621), Expect = 2.1e-176
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300
           LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH
Sbjct: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300

Query: 301 WRWQNLE 308
           WRWQNLE
Sbjct: 301 WRWQNLE 307

[Close]

BLAST of CsaV3_1G028580 vs. NCBI nr
Match: TYK03635.1 (Tetrapyrrole biosynthesis, uroporphyrinogen III synthase [Cucumis melo var. makuwa])

HSP 1 Score: 601.3 bits (1549), Expect = 4.7e-168
Identity = 292/307 (95.11%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFH++ LTSSPSPAIPTH SPRT AFTTP NYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTIC NTSRIRVVVPEIATPTGLVEALGVGNHR VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300
           LLKSL HLGLEWD+MK+RWPEMVVAAHGPVTAAGAERLGVKVDLVS KFDSFNGVVD+LH
Sbjct: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300

Query: 301 WRWQNLE 308
           WRWQ+L+
Sbjct: 301 WRWQSLD 307

[Close]

BLAST of CsaV3_1G028580 vs. NCBI nr
Match: XP_008444040.1 (PREDICTED: uncharacterized protein LOC103487492 [Cucumis melo] >KAA0050031.1 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase [Cucumis melo var. makuwa])

HSP 1 Score: 600.5 bits (1547), Expect = 8.1e-168
Identity = 292/307 (95.11%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFH++ LTSSPSPAIPTH SPRT AFTTP NYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTIC NTSRIRVVVPEIATPTGLVEALGVGNHR VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300
           LLKSL HLGLEWD+MK+RWPEMVVAAHGPVTAAGAERLGVKVDLVS KFDSFNGVVD+LH
Sbjct: 241 LLKSLEHLGLEWDMMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300

Query: 301 WRWQNLE 308
           WRWQ+L+
Sbjct: 301 WRWQSLD 307

[Close]

BLAST of CsaV3_1G028580 vs. NCBI nr
Match: XP_038878808.1 (uncharacterized protein LOC120070948 [Benincasa hispida] >XP_038878809.1 uncharacterized protein LOC120070948 [Benincasa hispida] >XP_038878810.1 uncharacterized protein LOC120070948 [Benincasa hispida])

HSP 1 Score: 558.5 bits (1438), Expect = 3.5e-155
Identity = 274/307 (89.25%), Postives = 285/307 (92.83%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPN P HLN L+ SPS AIPTH + RT AFTTP NYA SLSHLLSLK FEPLWC
Sbjct: 1   MSTGAAHPNRPIHLNPLSLSPSAAIPTHSTRRTVAFTTPQNYADSLSHLLSLKSFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTV PTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPS GDTFLIA
Sbjct: 61  PTLTVHPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSRGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180
           ALGKDSELLDH FL+  C NTSRIRVVVPEIATPTGLVEALG+GN R VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHGFLSRFCPNTSRIRVVVPEIATPTGLVEALGIGNQRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLE KGWVPVRV AYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLETKGWVPVRVAAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300
           LLKSL HLGL+W+VM++RWPEMVVAA+GPVTAAGAERLG+KVDLVSSKFDSFNGVVDALH
Sbjct: 241 LLKSLGHLGLKWEVMRKRWPEMVVAANGPVTAAGAERLGIKVDLVSSKFDSFNGVVDALH 300

Query: 301 WRWQNLE 308
           WRWQ+LE
Sbjct: 301 WRWQSLE 307

[Close]

BLAST of CsaV3_1G028580 vs. NCBI nr
Match: KAG6587847.1 (hypothetical protein SDJN03_16412, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035661.1 hypothetical protein SDJN02_02459, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 518.1 bits (1333), Expect = 5.3e-143
Identity = 254/307 (82.74%), Postives = 276/307 (89.90%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHP+   HLN L SSPSPAIPT+   RT AFTTP NYAGSLS+LLSLKGF+PLWC
Sbjct: 1   MSTGAAHPSPIHHLNPLASSPSPAIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PT+TV PTPLAIKSHLLPP LH +SAVAFTSRSGITALLDAATEI EPLL   GDTFLIA
Sbjct: 61  PTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDEPLLSPQGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180
           ALGKDSELLDH  L+  C N SRIRVVVP+IA+P+GLVEALG+GNHR VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHGVLSKFCPNASRIRVVVPKIASPSGLVEALGIGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDL A GWVPVRVDAYETRW GP+CARKL ERG+DEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLAASGWVPVRVDAYETRWVGPECARKLAERGEDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300
           LLKSL  LGL+W++M+++WPEMV+AAHGPVTAAGAERLGVK+DLVSSKFDSFNGVVDALH
Sbjct: 241 LLKSLRALGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALH 300

Query: 301 WRWQNLE 308
            RWQ+LE
Sbjct: 301 SRWQSLE 307

[Close]

BLAST of CsaV3_1G028580 vs. ExPASy TrEMBL
Match: A0A0A0LZ08 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis sativus OX=3659 GN=Csa_1G266180 PE=3 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 1.0e-176
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300
           LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH
Sbjct: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300

Query: 301 WRWQNLE 308
           WRWQNLE
Sbjct: 301 WRWQNLE 307

[Close]

BLAST of CsaV3_1G028580 vs. ExPASy TrEMBL
Match: A0A5D3BX13 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00630 PE=3 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 2.3e-168
Identity = 292/307 (95.11%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFH++ LTSSPSPAIPTH SPRT AFTTP NYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTIC NTSRIRVVVPEIATPTGLVEALGVGNHR VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300
           LLKSL HLGLEWD+MK+RWPEMVVAAHGPVTAAGAERLGVKVDLVS KFDSFNGVVD+LH
Sbjct: 241 LLKSLEHLGLEWDIMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300

Query: 301 WRWQNLE 308
           WRWQ+L+
Sbjct: 301 WRWQSLD 307

[Close]

BLAST of CsaV3_1G028580 vs. ExPASy TrEMBL
Match: A0A5A7U8V3 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00050 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 3.9e-168
Identity = 292/307 (95.11%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFH++ LTSSPSPAIPTH SPRT AFTTP NYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTIC NTSRIRVVVPEIATPTGLVEALGVGNHR VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300
           LLKSL HLGLEWD+MK+RWPEMVVAAHGPVTAAGAERLGVKVDLVS KFDSFNGVVD+LH
Sbjct: 241 LLKSLEHLGLEWDMMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300

Query: 301 WRWQNLE 308
           WRWQ+L+
Sbjct: 301 WRWQSLD 307

[Close]

BLAST of CsaV3_1G028580 vs. ExPASy TrEMBL
Match: A0A1S3BA78 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo OX=3656 GN=LOC103487492 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 3.9e-168
Identity = 292/307 (95.11%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHPNGPFH++ LTSSPSPAIPTH SPRT AFTTP NYAGSLSHLLSLKGFEPLWC
Sbjct: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180
           ALGKDSELLDHEFLTTIC NTSRIRVVVPEIATPTGLVEALGVGNHR VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300
           LLKSL HLGLEWD+MK+RWPEMVVAAHGPVTAAGAERLGVKVDLVS KFDSFNGVVD+LH
Sbjct: 241 LLKSLEHLGLEWDMMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300

Query: 301 WRWQNLE 308
           WRWQ+L+
Sbjct: 301 WRWQSLD 307

[Close]

BLAST of CsaV3_1G028580 vs. ExPASy TrEMBL
Match: A0A6J1KXQ2 (Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucurbita maxima OX=3661 GN=LOC111497286 PE=3 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.7e-143
Identity = 255/307 (83.06%), Postives = 278/307 (90.55%), Query Frame = 0


Query: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60
           MSTGAAHP+   HLN L SSPSPAIPT+   RT AFTTP NYAGSLS+LLSLKGF+PLWC
Sbjct: 1   MSTGAAHPS-LIHLNPLASSPSPAIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWC 60

Query: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120
           PT+TV PTPLAIKSHLLPP LH +SAVAFTSRSGITALLDAATEI +PLL   GDTFLIA
Sbjct: 61  PTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIA 120

Query: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180
           ALGKDSELLDH  L+  C NTSRIRVVVP+IATP+GLVEALG+GNHR VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHGVLSKFCPNTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDL A GWVPVRVDAYETRWAGP+CAR LV+RG+DEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLAASGWVPVRVDAYETRWAGPECARMLVKRGEDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300
           LLKSL  LGL+W++M+++WPEMV+AAHGPVTAAGAERLGVK+DLVSSKFDSFNGVVDALH
Sbjct: 241 LLKSLRTLGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALH 300

Query: 301 WRWQNLE 308
            RWQ+LE
Sbjct: 301 SRWQSLE 306

The following BLAST results are available for this feature:

BLAST of CsaV3_1G028580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648476.1	2.1e-176	100.00	uncharacterized protein LOC105434481 [Cucumis sativus] >KGN65221.1 hypothetical ...	[more]
TYK03635.1	4.7e-168	95.11	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase [Cucumis melo var. maku...	[more]
XP_008444040.1	8.1e-168	95.11	PREDICTED: uncharacterized protein LOC103487492 [Cucumis melo] >KAA0050031.1 Tet...	[more]
XP_038878808.1	3.5e-155	89.25	uncharacterized protein LOC120070948 [Benincasa hispida] >XP_038878809.1 unchara...	[more]
KAG6587847.1	5.3e-143	82.74	hypothetical protein SDJN03_16412, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_1G028580 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G028580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZ08	1.0e-176	100.00	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis sativus OX=3659 GN=Csa_1G2...	[more]
A0A5D3BX13	2.3e-168	95.11	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7U8V3	3.9e-168	95.11	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BA78	3.9e-168	95.11	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucumis melo OX=3656 GN=LOC1034874...	[more]
A0A6J1KXQ2	9.7e-143	83.06	Hydroxymethylbilane hydrolyase [cyclizing] OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CsaV3_1G028580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036108	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily	GENE3D	3.40.50.10090		coord: 185..304 e-value: 2.0E-14 score: 55.4
IPR036108	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily	SUPERFAMILY	69618	HemD-like	coord: 35..299
IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase	PFAM	PF02602	HEM4	coord: 46..293 e-value: 2.8E-25 score: 89.1
IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase	CDD	cd06578	HemD	coord: 37..299 e-value: 1.96713E-25 score: 99.6891
None	No IPR available	PANTHER	PTHR38020	UROPORPHYRINOGEN-III SYNTHASE	coord: 18..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G028580.1	CsaV3_1G028580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033014	tetrapyrrole biosynthetic process
molecular_function	GO:0004852	uroporphyrinogen-III synthase activity