CsaV3_1G028480 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G028480
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 15494616 .. 15495546 (-)
RNA-Seq ExpressionCsaV3_1G028480
SyntenyCsaV3_1G028480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCGACGACGTCGGAGCTCCGGACGGCGGTGCCATCTCACGACGACAGCGAATGTGGAACGTCGGAGAGGCGGCGGACCATCTTAGCAAGTGGAGACTTCGGCGGCGACTGTGGAGACTTGAAAGTGTTTATATTTAGGCTTTCTTACCTCTTAAAATTATTGAAAGGTTTGAATTTATTTTGTAAATTGCTACTTGAAACTAATGTTTTGTCTCAAATGCTTATGAAGAATTCAATAGAGCTTTTTGGGTATGCCAAATTTTGTTTTTTGAGATTGTATGCGTATTTCGTAGTAGCTAAATTTGGAATTGACGGTATATTATCTGCTTGAAATTTATTTCTTGGAAGACACTTATTAGTGGTTTGGCATTCTTTTCGAACGAAGATTTATGTGTGTTGCAGTGACACGTTGTTACAATTAAGTAATTGACTTCTAATATGGTTACCTATGGTGGGCTATTTCAAATTTTCAACTATGCATCTTCCCTACACTAAATGGCTGAGGATTCTATTGTATGTGGTGAAGTGTTGTTTGATTGATTGAGATTTTTGTTTGATTGATTAAAAGCTTTATTTGTTTACAAAAGTTTTGAAAGGAAATGATTTCAAAGCTTGACATGTGACTTGCTTATTGAGTATTTTTGTACCCATTTTTGCTTTTCCAAAATGATTTTAGATGACAGCTCAGGTGATAGTTTTGAAAGAAGCTTTGCAGTGGTGATTTGTATCTTAGGATTTGATGGTTTGATTAAGAAATTGTTTGTAATTACTTGGTTCCTCTGATTTGTGTAATAAGTTGTAAAGGTATAATAGTTATGCTTATGCATTATTGTTTTAATAGCTGTATTGGAAAATACGGGCTGTTACTGGTAAATTGTTAATTCAGATTGCGTTTGTTAATGATTCAGGACACTTTTGGAAGGATTTCTGA

mRNA sequence

GCGACGACGTCGGAGCTCCGGACGGCGGTGCCATCTCACGACGACAGCGAATGTGGAACGTCGGAGAGGCGGCGGACCATCTTAGCAAGTGGAGACTTCGGCGGCGACTGTGGAGACTTGAAAGTGTTTATATTTAGGCTTTCTTACCTCTTAAAATTATTGAAAGGACACTTTTGGAAGGATTTCTGA

Coding sequence (CDS)

GCGACGACGTCGGAGCTCCGGACGGCGGTGCCATCTCACGACGACAGCGAATGTGGAACGTCGGAGAGGCGGCGGACCATCTTAGCAAGTGGAGACTTCGGCGGCGACTGTGGAGACTTGAAAGTGTTTATATTTAGGCTTTCTTACCTCTTAAAATTATTGAAAGGACACTTTTGGAAGGATTTCTGA

Protein sequence

ATTSELRTAVPSHDDSECGTSERRRTILASGDFGGDCGDLKVFIFRLSYLLKLLKGHFWKDF*
Homology
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BLAST of CsaV3_1G028480 vs. NCBI nr
Match: KAE8653035.1 (hypothetical protein Csa_023926, partial [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 2.8e-27
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  ATTSELRTAVPSHDDSECGTSERRRTILASGDFGGDCGDLKVFIFRLSYLLKLLKGHFWK 60
          ATTSELRTAVPSHDDSECGTSERRRTILASGDFGGDCGDLKVFIFRLSYLLKLLKGHFWK
Sbjct: 1  ATTSELRTAVPSHDDSECGTSERRRTILASGDFGGDCGDLKVFIFRLSYLLKLLKGHFWK 60

Query: 61 DF 63
          DF
Sbjct: 61 DF 62

The following BLAST results are available for this feature:
BLAST of CsaV3_1G028480 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8653035.12.8e-27100.00hypothetical protein Csa_023926, partial [Cucumis sativus][more]
BLAST of CsaV3_1G028480 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G028480 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G028480 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G028480.1CsaV3_1G028480.1mRNA