CsaV3_1G028370 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G028370
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Serine-rich protein-like protein
Location	chr1: 15402485 .. 15403096 (-)
RNA-Seq Expression	CsaV3_1G028370
Synteny	CsaV3_1G028370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTTCTAGAAAATCCAGCGGGCCGGTCCTGAGGTCTCTTTCGCCTTCTGGGAGATTCTACGGCTCCTGTTCTTCTTATTCCTCTTCTTCTTCATCGGCTTTTGCCTCTTCCACATCAAGCTTTTCCACCAGAAACGCTACTTCCTTTTTCCCTAGATCTGTGTCTCCTTCTCGTGTTAATCTGCAAGGATCCTCTTCTCCGTCCGCCTCATCGGTCAGATTTTCACTGGACCGGTCCATTTCTCCGAATCGCCCTATCTCTGTTTTGTCTCGTGCCAGTGGGAATCATCAAGTGGTGAAGAAGCAGAGCCAACAGAAGAGGACCTGCATGTGTTCTCCAACCACACATCCTGGTTCGTTCCGGTGTAGTCTTCACAAAGGCGTTCAGTCGCAGCCTTCTACTCCTTACTCTTCTAATCGGCTCAACGCACGGCGATCGGCGATGACGAACTCTCTGGTTAGAATTGGAGGAGTTGAAGGCGATATATTGAGGCGAGCCTTGGCGTCTCTCATCCGACCTTCCTCTCATAGTCAAAGACGCCGAGTGGATTTCTGTCCAAGACCGAGTCGTCTTTCAATTATGTCGAAAGCTGATGATCTGTGA

mRNA sequence

ATGGCGGTTTCTTCTAGAAAATCCAGCGGGCCGGTCCTGAGGTCTCTTTCGCCTTCTGGGAGATTCTACGGCTCCTGTTCTTCTTATTCCTCTTCTTCTTCATCGGCTTTTGCCTCTTCCACATCAAGCTTTTCCACCAGAAACGCTACTTCCTTTTTCCCTAGATCTGTGTCTCCTTCTCGTGTTAATCTGCAAGGATCCTCTTCTCCGTCCGCCTCATCGGTCAGATTTTCACTGGACCGGTCCATTTCTCCGAATCGCCCTATCTCTGTTTTGTCTCGTGCCAGTGGGAATCATCAAGTGGTGAAGAAGCAGAGCCAACAGAAGAGGACCTGCATGTGTTCTCCAACCACACATCCTGGTTCGTTCCGGTGTAGTCTTCACAAAGGCGTTCAGTCGCAGCCTTCTACTCCTTACTCTTCTAATCGGCTCAACGCACGGCGATCGGCGATGACGAACTCTCTGGTTAGAATTGGAGGAGTTGAAGGCGATATATTGAGGCGAGCCTTGGCGTCTCTCATCCGACCTTCCTCTCATAGTCAAAGACGCCGAGTGGATTTCTGTCCAAGACCGAGTCGTCTTTCAATTATGTCGAAAGCTGATGATCTGTGA

Coding sequence (CDS)

ATGGCGGTTTCTTCTAGAAAATCCAGCGGGCCGGTCCTGAGGTCTCTTTCGCCTTCTGGGAGATTCTACGGCTCCTGTTCTTCTTATTCCTCTTCTTCTTCATCGGCTTTTGCCTCTTCCACATCAAGCTTTTCCACCAGAAACGCTACTTCCTTTTTCCCTAGATCTGTGTCTCCTTCTCGTGTTAATCTGCAAGGATCCTCTTCTCCGTCCGCCTCATCGGTCAGATTTTCACTGGACCGGTCCATTTCTCCGAATCGCCCTATCTCTGTTTTGTCTCGTGCCAGTGGGAATCATCAAGTGGTGAAGAAGCAGAGCCAACAGAAGAGGACCTGCATGTGTTCTCCAACCACACATCCTGGTTCGTTCCGGTGTAGTCTTCACAAAGGCGTTCAGTCGCAGCCTTCTACTCCTTACTCTTCTAATCGGCTCAACGCACGGCGATCGGCGATGACGAACTCTCTGGTTAGAATTGGAGGAGTTGAAGGCGATATATTGAGGCGAGCCTTGGCGTCTCTCATCCGACCTTCCTCTCATAGTCAAAGACGCCGAGTGGATTTCTGTCCAAGACCGAGTCGTCTTTCAATTATGTCGAAAGCTGATGATCTGTGA

Protein sequence

MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPSRVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHPGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHSQRRRVDFCPRPSRLSIMSKADDL*

Homology

[Close]

BLAST of CsaV3_1G028370 vs. NCBI nr
Match: XP_004146710.1 (uncharacterized serine-rich protein C215.13 [Cucumis sativus] >KGN65199.1 hypothetical protein Csa_019907 [Cucumis sativus])

HSP 1 Score: 374.4 bits (960), Expect = 6.2e-100
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRRVDFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of CsaV3_1G028370 vs. NCBI nr
Match: XP_016899807.1 (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo] >KAA0050058.1 putative serine-rich protein-like protein [Cucumis melo var. makuwa] >TYK10352.1 putative serine-rich protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 359.4 bits (921), Expect = 2.1e-95
Identity = 196/203 (96.55%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFST + TSFF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTTDHTSFFRRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRA+GNHQVVKKQS QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQS PSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRRVDFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of CsaV3_1G028370 vs. NCBI nr
Match: XP_038879100.1 (uncharacterized serine-rich protein C215.13-like [Benincasa hispida])

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-91
Identity = 192/204 (94.12%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGS-CSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSP 60
           MAVSSRKSSGPVLRSLSPSGRFYGS  SS SSSSSSAFASS+SSFSTRN TSFF RSVSP
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSSAFASSSSSFSTRNPTSFFRRSVSP 60

Query: 61  SRVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTH 120
           SRVNLQGSSSPSASSV FSLDRSISPNRPISVLSR SGNHQVVKKQS QKRTCMCSPTTH
Sbjct: 61  SRVNLQGSSSPSASSVSFSLDRSISPNRPISVLSRTSGNHQVVKKQSNQKRTCMCSPTTH 120

Query: 121 PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSH 180
           PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD++RRALASLIRPSSH
Sbjct: 121 PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVRRALASLIRPSSH 180

Query: 181 SQRRRVDFCPRPSRLSIMSKADDL 204
           SQRRR DFCPRPSRLSIMSKADDL
Sbjct: 181 SQRRRADFCPRPSRLSIMSKADDL 204

[Close]

BLAST of CsaV3_1G028370 vs. NCBI nr
Match: XP_022933728.1 (uncharacterized protein LOC111441057 [Cucurbita moschata] >KAG6587861.1 hypothetical protein SDJN03_16426, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 323.2 bits (827), Expect = 1.7e-84
Identity = 182/203 (89.66%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  SS SSAFASSTSSFSTRN T FF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPT-FFRRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           R+NLQ SSSPSASSVRFSLDRSISPNRPISV +R SGN QVVK+QS QKRTCMCSPTTHP
Sbjct: 61  RINLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRR DFCPRPSRLS MSKADDL
Sbjct: 181 QRRRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of CsaV3_1G028370 vs. NCBI nr
Match: KAG7021750.1 (hypothetical protein SDJN02_15477, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.2 bits (827), Expect = 1.7e-84
Identity = 182/203 (89.66%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  SS SSAFASSTSSFSTRN T FF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPT-FFRRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           R+NLQ SSSPSASSVRFSLDRSISPNRPISV +R SGN QVVK+QS QKRTCMCSPTTHP
Sbjct: 61  RINLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRR DFCPRPSRLS MSKADDL
Sbjct: 181 QRRRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of CsaV3_1G028370 vs. ExPASy TrEMBL
Match: A0A0A0LW36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.0e-100
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRRVDFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of CsaV3_1G028370 vs. ExPASy TrEMBL
Match: A0A5A7U461 (Putative serine-rich protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00290 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.0e-95
Identity = 196/203 (96.55%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFST + TSFF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTTDHTSFFRRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRA+GNHQVVKKQS QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQS PSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRRVDFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of CsaV3_1G028370 vs. ExPASy TrEMBL
Match: A0A1S4DUZ2 (uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC103487397 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.0e-95
Identity = 196/203 (96.55%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFST + TSFF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTTDHTSFFRRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRA+GNHQVVKKQS QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQS PSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRRVDFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of CsaV3_1G028370 vs. ExPASy TrEMBL
Match: A0A6J1F5M8 (uncharacterized protein LOC111441057 OS=Cucurbita moschata OX=3662 GN=LOC111441057 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 8.0e-85
Identity = 182/203 (89.66%), Postives = 188/203 (92.61%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  SS SSAFASSTSSFSTRN T FF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPT-FFRRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           R+NLQ SSSPSASSVRFSLDRSISPNRPISV +R SGN QVVK+QS QKRTCMCSPTTHP
Sbjct: 61  RINLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRR DFCPRPSRLS MSKADDL
Sbjct: 181 QRRRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of CsaV3_1G028370 vs. ExPASy TrEMBL
Match: A0A6J1HNK6 (uncharacterized protein LOC111465917 OS=Cucurbita maxima OX=3661 GN=LOC111465917 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 8.8e-84
Identity = 181/203 (89.16%), Postives = 187/203 (92.12%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGRFYGS SS  SS SSAFASSTSSFSTRN T FF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPT-FFRRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120
           R+NLQ SSSPSASSVRFSLDRSISPNRPISV +R SGN QVVK+QS QKRTCMCSPTTHP
Sbjct: 61  RINLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHS 180

Query: 181 QRRRVDFCPRPSRLSIMSKADDL 204
           QRRR DFCPR SRLS MSKADDL
Sbjct: 181 QRRRADFCPRRSRLSNMSKADDL 201

[Close]

BLAST of CsaV3_1G028370 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 179.1 bits (453), Expect = 3.6e-45
Identity = 125/219 (57.08%), Postives = 149/219 (68.04%), Query Frame = 0


Query: 4   SSRKSSGPVLRSLSPSGRFYGSCS-SYSSSSSSAFASSTSSFSTRNATSFFP-------- 63
           S  KS+GPVLRS SPSGRF G  S +  SSSSSAFASSTSS  +  +++FF         
Sbjct: 6   SRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHRHHESN 65

Query: 64  ----RSVSPSRVNLQGSSSPSASSVRFSLD-RSISP-NRPISVLSR--ASGNHQVVKKQS 123
               RS SP+RVNL  ++ P + S R+SLD RSISP N+ ISV      S NH++     
Sbjct: 66  HSHHRSASPTRVNLY-TAQPMSQSFRYSLDSRSISPTNKSISVSKNQPPSHNHKI----- 125

Query: 124 QQKRTCMCSPTTHPGSFRCSLHKGV---QSQPSTPYSSNRLNARRSAMTNSLVRIGGVEG 183
              R CMCSPTTHPGSFRCSLHK V     Q +  Y++N LN RRSAMTNSLVRIGGVEG
Sbjct: 126 --SRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEG 185

Query: 184 DILRRALASLIRPSSHSQRRRVDFCPRPSRLSIMSKADD 203
           + +RRAL +LIRPSSH  +RR  + PRPSRLSIM+KAD+
Sbjct: 186 EWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of CsaV3_1G028370 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43
Identity = 120/217 (55.30%), Postives = 144/217 (66.36%), Query Frame = 0


Query: 4   SSRKSSGPVLRSLSPSGRFYGSCSS---YSSSSSSAFASSTSSFSTRNATSFFP------ 63
           ++R +    LRS SPSGRF G  S+    SS SSS FASSTSS  +  +T+FF       
Sbjct: 8   TTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNN 67

Query: 64  ----RSVSPSRVNLQGSSSPSASSVRFSLD-RSISPNRPISVLSRASGNHQVVKKQSQQK 123
               RS SP+RVNL  +S+P   S R+S+D RSISPNR I+V S    NH    K    +
Sbjct: 68  HHQHRSASPTRVNL-FTSAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNHH---KIPDSR 127

Query: 124 RTCMCSPTTHPGSFRCSLHKGV---QSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDIL 183
           R CMCSPTTHPGSFRCSLHK V     Q +  Y++N LN RRSAMTNSLVRIGGVEG+ +
Sbjct: 128 RRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWV 187

Query: 184 RRALASLIRPSSHSQRRRVDFCPRPSRLSIMSKADDL 204
           RRAL +LIRPSSH  +RR  + PR SRL+ MSKA+DL
Sbjct: 188 RRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAEDL 220

[Close]

BLAST of CsaV3_1G028370 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43
Identity = 120/217 (55.30%), Postives = 144/217 (66.36%), Query Frame = 0


Query: 4   SSRKSSGPVLRSLSPSGRFYGSCSS---YSSSSSSAFASSTSSFSTRNATSFFP------ 63
           ++R +    LRS SPSGRF G  S+    SS SSS FASSTSS  +  +T+FF       
Sbjct: 8   TTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNN 67

Query: 64  ----RSVSPSRVNLQGSSSPSASSVRFSLD-RSISPNRPISVLSRASGNHQVVKKQSQQK 123
               RS SP+RVNL  +S+P   S R+S+D RSISPNR I+V S    NH    K    +
Sbjct: 68  HHQHRSASPTRVNL-FTSAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNHH---KIPDSR 127

Query: 124 RTCMCSPTTHPGSFRCSLHKGV---QSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDIL 183
           R CMCSPTTHPGSFRCSLHK V     Q +  Y++N LN RRSAMTNSLVRIGGVEG+ +
Sbjct: 128 RRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWV 187

Query: 184 RRALASLIRPSSHSQRRRVDFCPRPSRLSIMSKADDL 204
           RRAL +LIRPSSH  +RR  + PR SRL+ MSKA+DL
Sbjct: 188 RRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAEDL 220

[Close]

BLAST of CsaV3_1G028370 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-14
Identity = 57/146 (39.04%), Postives = 75/146 (51.37%), Query Frame = 0


Query: 65  QGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHPGSFR 124
           Q S SP   ++   L      + P   +   S NHQ        KR C+CSPTTHPGSFR
Sbjct: 31  QRSPSPCNKNLNLRLKFYSPGSIPKPSVVTVSSNHQT-------KRKCLCSPTTHPGSFR 90

Query: 125 CSLHKGVQSQPSTPYSS------NR----------LNARRSAMTNSLVRIGGVEGDILRR 184
           CS H+ ++ + S   +S      NR          LN R+ A+ NSL +IG VE +  RR
Sbjct: 91  CSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLAKIGSVEAERFRR 150

Query: 185 AL-ASLIRPSSHSQRRRVDFCPRPSR 194
           +L A+L +PSS    RR +F PR SR
Sbjct: 151 SLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of CsaV3_1G028370 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 2.1e-05
Identity = 18/38 (47.37%), Postives = 26/38 (68.42%), Query Frame = 0


Query: 97  GNHQVVKKQSQQKRTCMCSPTTHPGSFRCSLHKGVQSQ 135
           G+  + ++ S  K  C+CSPTTHPGSFRC +H+ +  Q
Sbjct: 29  GSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQ 66

The following BLAST results are available for this feature:

BLAST of CsaV3_1G028370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146710.1	6.2e-100	100.00	uncharacterized serine-rich protein C215.13 [Cucumis sativus] >KGN65199.1 hypoth...	[more]
XP_016899807.1	2.1e-95	96.55	PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo] >KAA0...	[more]
XP_038879100.1	1.8e-91	94.12	uncharacterized serine-rich protein C215.13-like [Benincasa hispida]	[more]
XP_022933728.1	1.7e-84	89.66	uncharacterized protein LOC111441057 [Cucurbita moschata] >KAG6587861.1 hypothet...	[more]
KAG7021750.1	1.7e-84	89.66	hypothetical protein SDJN02_15477, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsaV3_1G028370 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G028370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW36	3.0e-100	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1	[more]
A0A5A7U461	1.0e-95	96.55	Putative serine-rich protein-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S4DUZ2	1.0e-95	96.55	uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1F5M8	8.0e-85	89.66	uncharacterized protein LOC111441057 OS=Cucurbita moschata OX=3662 GN=LOC1114410...	[more]
A0A6J1HNK6	8.8e-84	89.16	uncharacterized protein LOC111465917 OS=Cucurbita maxima OX=3661 GN=LOC111465917...	[more]

BLAST of CsaV3_1G028370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	3.6e-45	57.08	serine-rich protein-related	[more]
AT5G25280.1	1.5e-43	55.30	serine-rich protein-related	[more]
AT5G25280.2	1.5e-43	55.30	serine-rich protein-related	[more]
AT5G20370.1	1.1e-14	39.04	serine-rich protein-related	[more]
AT1G67910.1	2.1e-05	47.37	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..79
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 1..203
None	No IPR available	PANTHER	PTHR33132:SF75	SUBFAMILY NOT NAMED	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G028370.1	CsaV3_1G028370.1	mRNA