CsaV3_1G027980 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G027980
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Armadillo-like helical
Location	chr1: 14915838 .. 14918671 (+)
RNA-Seq Expression	CsaV3_1G027980
Synteny	CsaV3_1G027980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTTGTTGTTAGACCATAAAATGCCACTCTAATAAAATTAAAGAATCATCCTCCCACCATATGTGCCTACACCTCAAGCCTTTGAGAGGCACCCTAGCTTCATAATCCCACAAAATCCACCCTAGAAGGGACCATTTCCTACCATGACCTTATTCCATCTTCCACGATTTTGCACATGAAGCATGATCTGATGAACAAAACCTTGAATGAAGTCTACCAACAAAGGAACCAAGATAATACATCCATGGAACAATACCATTTTATTCCACGATGTTTTTATCCACCCCAACATCACAAGCAACAAATTGAAGTTTTCCAACGATCATGTTCATGCATGGTCCAATCAATCCATCCACAACATTAGATACAATTTTTTAATCATGGTGAAATGTCGTAATAAGTTAAAACTCTATTTGATAACCAATTTGTTTGTTTGTGTTTTTTAGTTTTTGAAAATTAAGACTACTCTATCACATTTTTTAAAATTGATTTACATTCTTTTTAAGAAAAAGGAGTTGAATTCCTAGCTTAATTTAGAAAACAAAAGTTACACATTTTTTAATTTTCAAAATTGGCTTGATTAAAAACATGAGTATTTATAAGTTTTATTTTCACAAACTAATAATAAAAAATCAAATATTTATTAATGGAGTCCAAAATTATTATAATTTCCCACTTTCTCATTTGGTAGTTGCAATTTGATTTCTTAAAAAATAAATTTAATCAATGCTTTTTCTTAGTTGCATTCAATAACTTTAGTTTAAAAAAAGTTAGTCCAATTGACCATTATATTGAAGATTAAGAATTTTGTGTGTGAAATTTACGTTTTATTGTACTAAAAGGATAAATTGTTTGTTTTTGAATTCAAACTAAATGATATTTGATTAATGATTAAACCTTTTATTTAATATTTTAAATCATCGCTTAATGGTCAATAAAAATTAATGGCTTTCATAAAATATTTGAGAAATATGTTTAAGATATATGTTAGCCACTTACTCCATATTCAAGTAAAAAATTAAGAAAAAGAAAACTATTTTGAATAAGTGTATTTTGTTAGTTATGTTAAGTTGAGATTATCACGGAGAAAGATGGATATTGTAAAAAGTTGTAAGAGGGAAAGAATTAGAAAGGTAAATTAGTTTATAAATGAAATAATTAGTGTTGAAAAGGATTTTTTGGAAGGCAACTCCAACGCCAACGCCAACCAATGTTTATTGTATTTTATTTTATTTTTCAATGAATTTGAAAATATATGATTAGAAACAAAAAGAAAATAGAAAGTCCAATTCCTCGGCTTCCTGAACTATTATTATAACTAAAATCATTCTTTTGCTACTTTTGTTTGTATGTAGAACCGAGAGCGCCACATCGTTCTCTCTCGAACAACCCCTGCTCCAGAATTCAAACTCCTTCCCCTCCCCCTCCCCCATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGATTGATAGGAAACTGTGAGGGGATTTTGGTTTGATTGTGTTCATGAATATGGTGGATCGAAGGAATCGATGAGGTGCGTAAGTTCCAAATTTTTGTTTCTGGGATGATGAACATTCATTCATCAATCCTTTGTCTCTGTTCATATGTTGGTGTCATAGTTATATGTTGGAATCAAAAATGTAAATCAAAGTAGTGTAATTAAAAAAAAGACAATATATTTTTTATA

mRNA sequence

ATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGA

Coding sequence (CDS)

ATGGATGATTCTTCCAAGAACGAAGATAGCCCACGAGTTGTTAGAGTTCTCGAAGCTCTCAAGCAAGCCTCTCATGAATTACAATCAAATCCAAATCCTCGTTCCCACGAGTTCAATTCTCCCGCCATTAAAGCTCTGCTTGAACTCGAGGTTGAATCCGACAAAAACCTTTCCACCGATCCAAATCTCTCCACTCTCTCTCACCATCTCGCCAACCTAAAATCCTTAGTGGACACGCTTCAGAAATCCAGAGGTTACAGTCCCAGGTCATTCTTAACCCGCCGTTTCGCCACGAATTCCGTATCGCAAGTCGCCGGTTCAATCGAATCGGAGATTCAAGCTTGGATTGACCGTAAAAGCTTGGACACTTTGGTTCGAGCTCTTAAAGAGCCTTCAATCGATGAGAACGAATTGATTAAGTTACTAACTCAGTTTGAGAATCGACTCGCTCAAGGTTTCAACCGTGAATTACAGGATCTCATGCTGAAATCGAAGGTGTTTTCGCTGCTTGAATCGATCGTTTGTAACCCTAATTTCTCGAAAACGATCCGAGAGCATTCCGCGTATGTGATTGGGGGAATGGTCCGTTTCAATAAAGATGTATTCGTCGGTCAAATATTAATGGGACCGACAATTCATGCCCTAGTTGAAATGGCTTCTTCTCACTCATTAAAAATCCTCTGCTCTTTAATCAGATTAATTAGGTCTCCGTTGGTGGAGGAAATCGAATCAAACGGCGATATACCAAAAATAATAAGCTTATTGAATTGTGCAGATCTGCAAATTAGGGTTTTAGCCATGGATTGCATTGTCGAAATTGGGTATTTTGGGCGTAAAGATACCGTAGATGCTATGCTGGAACAGGATTTGATAGACAGGCTTGTGGAGTTGCAGAGGTCGGAATTGGGCGGGGATTTGATCGGACTAGGAAAACACACGGCAGAGGAGAGTAGAGAGGTCACTGGGAGCGCCGGAGAGAAGAGGTTCTTGGAGAAGCATCCATTTGCGAGCTGTGTAGCGAAATTTGGAGTGCAATTGGAGGTTGGAGAAGGGTTGAGGAAGAGGGAAAAGAGGGCGATTAAGGGTGAAATTTTGAAGAGAGTTCGAAAAGCTTGTGTTTCGGATGCTGAAGCAGCCACCATAATTGCTGAGGTTTTGTGGGGTTCAAGTCCTTGA

Protein sequence

MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTDPNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKSLDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRSELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP*

Homology

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BLAST of CsaV3_1G027980 vs. NCBI nr
Match: KGN65105.1 (hypothetical protein Csa_004579 [Cucumis sativus])

HSP 1 Score: 750.7 bits (1937), Expect = 6.2e-213
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360
           ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI
Sbjct: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360

Query: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           KGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 391

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BLAST of CsaV3_1G027980 vs. NCBI nr
Match: KAA0050093.1 (Armadillo-like helical [Cucumis melo var. makuwa])

HSP 1 Score: 721.1 bits (1860), Expect = 5.2e-204
Identity = 377/392 (96.17%), Postives = 385/392 (98.21%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKNEDSPRVVRVLEALKQASHELQSNP+PRSH+FNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPSPRSHQFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSL++TL+KS+GYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLLETLRKSKGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENE IKLLTQFENRLAQ FNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENESIKLLTQFENRLAQDFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIG MVRFNKDVFVGQILMGPT HALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGAMVRFNKDVFVGQILMGPTTHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQI+VLAMDCIVEIGYFGRKDTVDAMLE+DLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIKVLAMDCIVEIGYFGRKDTVDAMLEEDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREV-TGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360
           ELGGDLIGLGKHTAEESREV  GSA EKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA
Sbjct: 301 ELGGDLIGLGKHTAEESREVAAGSAEEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360

Query: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           IKGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392

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BLAST of CsaV3_1G027980 vs. NCBI nr
Match: TYK06349.1 (Armadillo-like helical [Cucumis melo var. makuwa])

HSP 1 Score: 719.9 bits (1857), Expect = 1.2e-203
Identity = 376/392 (95.92%), Postives = 385/392 (98.21%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKN+DSPRVVRVLEALKQASHELQSNP+PRSH+FNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNDDSPRVVRVLEALKQASHELQSNPSPRSHQFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSL++TL+KS+GYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLLETLRKSKGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENE IKLLTQFENRLAQ FNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENESIKLLTQFENRLAQDFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIG MVRFNKDVFVGQILMGPT HALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGAMVRFNKDVFVGQILMGPTTHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQI+VLAMDCIVEIGYFGRKDTVDAMLE+DLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIKVLAMDCIVEIGYFGRKDTVDAMLEEDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREV-TGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360
           ELGGDLIGLGKHTAEESREV  GSA EKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA
Sbjct: 301 ELGGDLIGLGKHTAEESREVAAGSAEEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360

Query: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           IKGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392

[Close]

BLAST of CsaV3_1G027980 vs. NCBI nr
Match: KAG6589816.1 (hypothetical protein SDJN03_15239, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 648.3 bits (1671), Expect = 4.3e-182
Identity = 339/398 (85.18%), Postives = 363/398 (91.21%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDS K +DSPRV+RVLEALKQASHELQ++P+PRS +FNSPAIKALLELEVESDK LS+D
Sbjct: 1   MDDSPKKDDSPRVLRVLEALKQASHELQAHPSPRSGKFNSPAIKALLELEVESDKILSSD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNL TL+ HL NLK+LV+TLQK RGY  RSFLTRRFATNSVSQVAG IE+EIQAWIDR+S
Sbjct: 61  PNLLTLAQHLGNLKALVETLQKCRGYGLRSFLTRRFATNSVSQVAGLIEAEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           L++LVR LKEPS DENELIKLL QFENRLAQGFNRELQDLMLKSKVFS LESIVC+ N S
Sbjct: 121 LESLVRGLKEPSDDENELIKLLVQFENRLAQGFNRELQDLMLKSKVFSFLESIVCDSNLS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAY IG MVRFNKDVFVGQ+LMGPTIHALV+MASSHSLK+LCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYAIGAMVRFNKDVFVGQVLMGPTIHALVQMASSHSLKVLCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNC DLQIRVLAMDCI+EIGY+GRK+TVD MLE+DLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCHDLQIRVLAMDCIIEIGYYGRKETVDTMLEEDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTG-------SAGEKRFLEKHPFASCVAKFGVQLEVGEGLR 360
           ELGGDLIGLGKHTAEESREV          + EKRFLE HPFASCVAKF VQLEVGEGLR
Sbjct: 301 ELGGDLIGLGKHTAEESREVAAGEVEGRRESREKRFLESHPFASCVAKFAVQLEVGEGLR 360

Query: 361 KREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           KREKRAIK EIL+RVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 KREKRAIKPEILRRVRKACVSDAEAATIIAEVLWGSSP 398

[Close]

BLAST of CsaV3_1G027980 vs. NCBI nr
Match: KAG7021757.1 (hypothetical protein SDJN02_15484, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 644.0 bits (1660), Expect = 8.1e-181
Identity = 337/397 (84.89%), Postives = 362/397 (91.18%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           M+DSS  +DSPRV+RVLEALKQASHELQ+NP+PRS +FNSP IKALLELEVES+K LS+D
Sbjct: 1   MEDSSNKDDSPRVLRVLEALKQASHELQANPSPRSEDFNSPTIKALLELEVESEKILSSD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLS LS HLANLK+LV+TLQKSRGYS RSFLTRRFATNSVSQVAGSIESEIQAWIDR+S
Sbjct: 61  PNLSILSQHLANLKTLVETLQKSRGYSLRSFLTRRFATNSVSQVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           L+ LVRALKEPSI ENE IKLL QFENRLAQGFNRELQDLMLKSKVFSLLE IVCNPN+S
Sbjct: 121 LENLVRALKEPSIHENESIKLLIQFENRLAQGFNRELQDLMLKSKVFSLLELIVCNPNYS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAY IG MVRFNKDVFVGQ+L+GPTIHALV+MASSHSLK+LCSLIRL+RSPLVE
Sbjct: 181 KTIREHSAYAIGAMVRFNKDVFVGQVLIGPTIHALVQMASSHSLKVLCSLIRLVRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EI+SNGDIPKIIS LNC DLQIRVLAMDCIVEIGYFGRK+ VD MLE+ LI+RL+ELQRS
Sbjct: 241 EIQSNGDIPKIISSLNCQDLQIRVLAMDCIVEIGYFGRKEAVDTMLEEGLIERLLELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTG------SAGEKRFLEKHPFASCVAKFGVQLEVGEGLRK 360
           ELGGDLIGLGK TAE+SR V         + EKRFLE HPFASCVAKF VQLEVGEGLRK
Sbjct: 301 ELGGDLIGLGKQTAEDSRGVVAGGVEGRESREKRFLESHPFASCVAKFAVQLEVGEGLRK 360

Query: 361 REKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           REKRAIK EILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 REKRAIKPEILKRVRKACVSDAEAATIIAEVLWGSSP 397

[Close]

BLAST of CsaV3_1G027980 vs. ExPASy TrEMBL
Match: A0A0A0LT75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G222880 PE=4 SV=1)

HSP 1 Score: 750.7 bits (1937), Expect = 3.0e-213
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360
           ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI
Sbjct: 301 ELGGDLIGLGKHTAEESREVTGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRAI 360

Query: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           KGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 KGEILKRVRKACVSDAEAATIIAEVLWGSSP 391

[Close]

BLAST of CsaV3_1G027980 vs. ExPASy TrEMBL
Match: A0A5A7U2F9 (Armadillo-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00870 PE=4 SV=1)

HSP 1 Score: 721.1 bits (1860), Expect = 2.5e-204
Identity = 377/392 (96.17%), Postives = 385/392 (98.21%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKNEDSPRVVRVLEALKQASHELQSNP+PRSH+FNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPSPRSHQFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSL++TL+KS+GYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLLETLRKSKGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENE IKLLTQFENRLAQ FNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENESIKLLTQFENRLAQDFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIG MVRFNKDVFVGQILMGPT HALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGAMVRFNKDVFVGQILMGPTTHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQI+VLAMDCIVEIGYFGRKDTVDAMLE+DLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIKVLAMDCIVEIGYFGRKDTVDAMLEEDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREV-TGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360
           ELGGDLIGLGKHTAEESREV  GSA EKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA
Sbjct: 301 ELGGDLIGLGKHTAEESREVAAGSAEEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360

Query: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           IKGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392

[Close]

BLAST of CsaV3_1G027980 vs. ExPASy TrEMBL
Match: A0A5D3C7L4 (Armadillo-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00240 PE=4 SV=1)

HSP 1 Score: 719.9 bits (1857), Expect = 5.6e-204
Identity = 376/392 (95.92%), Postives = 385/392 (98.21%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSKN+DSPRVVRVLEALKQASHELQSNP+PRSH+FNSPAIKALLELEVESDKNLSTD
Sbjct: 1   MDDSSKNDDSPRVVRVLEALKQASHELQSNPSPRSHQFNSPAIKALLELEVESDKNLSTD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSL++TL+KS+GYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS
Sbjct: 61  PNLSTLSHHLANLKSLLETLRKSKGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           LDTLVRALKEPSIDENE IKLLTQFENRLAQ FNRELQDLMLKSKVFSLLESIVCNPNFS
Sbjct: 121 LDTLVRALKEPSIDENESIKLLTQFENRLAQDFNRELQDLMLKSKVFSLLESIVCNPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAYVIG MVRFNKDVFVGQILMGPT HALVEMASSHSLKILCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYVIGAMVRFNKDVFVGQILMGPTTHALVEMASSHSLKILCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNCADLQI+VLAMDCIVEIGYFGRKDTVDAMLE+DLIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCADLQIKVLAMDCIVEIGYFGRKDTVDAMLEEDLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEESREV-TGSAGEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360
           ELGGDLIGLGKHTAEESREV  GSA EKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA
Sbjct: 301 ELGGDLIGLGKHTAEESREVAAGSAEEKRFLEKHPFASCVAKFGVQLEVGEGLRKREKRA 360

Query: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           IKGEILKRVRKACVSDAEAATIIAEVLWGSSP
Sbjct: 361 IKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392

[Close]

BLAST of CsaV3_1G027980 vs. ExPASy TrEMBL
Match: A0A6J1C2L5 (uncharacterized protein LOC111006872 OS=Momordica charantia OX=3673 GN=LOC111006872 PE=4 SV=1)

HSP 1 Score: 640.6 bits (1651), Expect = 4.3e-180
Identity = 341/401 (85.04%), Postives = 366/401 (91.27%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDDSSK ED+PRV+RVLEALKQ SHELQ++P+P S EF+SPAIKALLELEVESDK LS+D
Sbjct: 1   MDDSSK-EDTPRVLRVLEALKQVSHELQAHPSPGSDEFDSPAIKALLELEVESDKILSSD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGYSPRSFLTRRFATNSVSQVAGSIESEIQAWIDRKS 120
           PNLSTLSHHLANLKSLV+TLQKSRGY  RSF TRRFATNSVSQVAGSIESEIQAWIDR+S
Sbjct: 61  PNLSTLSHHLANLKSLVETLQKSRGYGLRSFFTRRFATNSVSQVAGSIESEIQAWIDRES 120

Query: 121 LDTLVRALKEPSIDENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPNFS 180
           L+TLVRALKEPSIDENE IKLLTQFENRL QGFNRELQDLMLKSKVFSLLESIVC+PNFS
Sbjct: 121 LETLVRALKEPSIDENESIKLLTQFENRLDQGFNRELQDLMLKSKVFSLLESIVCSPNFS 180

Query: 181 KTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPLVE 240
           KTIREHSAY IG MVRFNKDVFVGQ+L GPTIHALV+MASSHSLK+LCSLIRLIRSPLVE
Sbjct: 181 KTIREHSAYAIGAMVRFNKDVFVGQVLTGPTIHALVQMASSHSLKVLCSLIRLIRSPLVE 240

Query: 241 EIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQRS 300
           EIESNGDIPKIISLLNC DLQIRVLAMDCIVEIGYFGRK+ VD ML++ LIDRLVELQRS
Sbjct: 241 EIESNGDIPKIISLLNCQDLQIRVLAMDCIVEIGYFGRKEAVDTMLDEGLIDRLVELQRS 300

Query: 301 ELGGDLIGLGKHTAEE-----SREVTG-----SAGEKRFLEKHPFASCVAKFGVQLEVGE 360
           ELGGDLIGLG+ TAEE     + EV G      + EK+FLE+HPFASCVA+F VQLEVGE
Sbjct: 301 ELGGDLIGLGRQTAEEGTGVAAGEVEGRREGRESREKKFLERHPFASCVARFTVQLEVGE 360

Query: 361 GLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           GLR+REKRAIK EILKRV KACVSDAEAATI+AEVLWGSSP
Sbjct: 361 GLRQREKRAIKPEILKRVTKACVSDAEAATIMAEVLWGSSP 400

[Close]

BLAST of CsaV3_1G027980 vs. ExPASy TrEMBL
Match: A0A6P6FUS8 (uncharacterized protein LOC112490105 OS=Ziziphus jujuba OX=326968 GN=LOC112490105 PE=4 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 6.8e-141
Identity = 271/408 (66.42%), Postives = 334/408 (81.86%), Query Frame = 0


Query: 1   MDDSSKNEDSPRVVRVLEALKQASHELQSNPNPRSHEFNSPAIKALLELEVESDKNLSTD 60
           MDD SK E+ PRV++VLEALKQASHELQ++P     E NS AIKALLELE ESD  LS D
Sbjct: 1   MDDPSK-EEGPRVLKVLEALKQASHELQAHPRQDFDEPNSSAIKALLELETESDTILSKD 60

Query: 61  PNLSTLSHHLANLKSLVDTLQKSRGY-SPRSFLTRRFATNSVSQVAGSIESEIQAWIDRK 120
           PNLS LS HL +LK+LV+T QK RG+ S RSFLTRR +T+S+S+VAGSIE+EIQAWIDR+
Sbjct: 61  PNLSILSQHLTSLKNLVETFQKCRGHLSIRSFLTRRVSTHSISRVAGSIENEIQAWIDRE 120

Query: 121 SLDTLVRALKEPSID-ENELIKLLTQFENRLAQGFNRELQDLMLKSKVFSLLESIVCNPN 180
           S++ L   L+EP  D E E ++LLTQFE+RLA+GFNRELQDL+LKSKVFSLLES +C+P+
Sbjct: 121 SVENLTWVLREPGNDKEEETVRLLTQFEDRLAEGFNRELQDLILKSKVFSLLESTLCDPD 180

Query: 181 FSKTIREHSAYVIGGMVRFNKDVFVGQILMGPTIHALVEMASSHSLKILCSLIRLIRSPL 240
            SK IREHSA+ IG ++RFNKDVFVGQ+LMGPT  AL+ MAS HS+K+LC LIR I+SPL
Sbjct: 181 SSKRIREHSAFAIGALIRFNKDVFVGQVLMGPTTRALITMASPHSIKVLCFLIRSIKSPL 240

Query: 241 VEEIESNGDIPKIISLLNCADLQIRVLAMDCIVEIGYFGRKDTVDAMLEQDLIDRLVELQ 300
           V+ IESNG+IP+II+ LNC D+Q+RV+AMDCI+EIGYFGRK+ +DAMLE+ LI +LVELQ
Sbjct: 241 VDVIESNGEIPRIIAFLNCQDVQVRVMAMDCILEIGYFGRKEAIDAMLEEGLIKKLVELQ 300

Query: 301 RSELGGDLIGLGKHTA-----EESREVTG----------SAGEKRFLEKHPFASCVAKFG 360
           RSELGGDLI LG++++     +E+REV+            + E+RFLE HPFASCVA+F 
Sbjct: 301 RSELGGDLIELGRYSSKNENEKENREVSADGVELGKKRRESRERRFLESHPFASCVARFA 360

Query: 361 VQLEVGEGLRKREKRAIKGEILKRVRKACVSDAEAATIIAEVLWGSSP 392
           VQLEVGEGLR+RE+RA K +I+ RVR+A  SDAEAATI+AEVLWG+SP
Sbjct: 361 VQLEVGEGLRQRERRAFKQQIVVRVREASASDAEAATIVAEVLWGASP 407

The following BLAST results are available for this feature:

BLAST of CsaV3_1G027980 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65105.1	6.2e-213	100.00	hypothetical protein Csa_004579 [Cucumis sativus]	[more]
KAA0050093.1	5.2e-204	96.17	Armadillo-like helical [Cucumis melo var. makuwa]	[more]
TYK06349.1	1.2e-203	95.92	Armadillo-like helical [Cucumis melo var. makuwa]	[more]
KAG6589816.1	4.3e-182	85.18	hypothetical protein SDJN03_15239, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021757.1	8.1e-181	84.89	hypothetical protein SDJN02_15484, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsaV3_1G027980 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G027980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT75	3.0e-213	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G222880 PE=4 SV=1	[more]
A0A5A7U2F9	2.5e-204	96.17	Armadillo-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6...	[more]
A0A5D3C7L4	5.6e-204	95.92	Armadillo-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A6J1C2L5	4.3e-180	85.04	uncharacterized protein LOC111006872 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6P6FUS8	6.8e-141	66.42	uncharacterized protein LOC112490105 OS=Ziziphus jujuba OX=326968 GN=LOC11249010...	[more]

BLAST of CsaV3_1G027980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 4..302 e-value: 1.8E-13 score: 52.3
None	No IPR available	PANTHER	PTHR35834	ARMADILLO-TYPE FOLD PROTEIN-RELATED	coord: 6..391
None	No IPR available	PANTHER	PTHR35834:SF2	ARMADILLO-TYPE FOLD PROTEIN-RELATED	coord: 6..391
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 33..301

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G027980.1	CsaV3_1G027980.1	mRNA