CsaV3_1G026580 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G026580
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 14329754 .. 14330002 (+)
RNA-Seq ExpressionCsaV3_1G026580
SyntenyCsaV3_1G026580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGTGCCGACTCTGAACCGGGAAGCCGAGGTCTTTGGAGAGACTGTAGACGATGTGTACACGTTCGGCGTTTTTATAGCCGCGAGATTCCAAAACCTCGGCGACGCTTGTGAACTCGTCGGGGGAGAAAACGGAACCGGAATAGATTTCGTCGGATACGAGATGGATGTTTTGCGTGTAACGAAATCTAGAATGTCTTCGATTGTGGACCGTTGGATCGTTGCTCCGAGTGGATTTGATGGGTTGTGA

mRNA sequence

ATCGTGCCGACTCTGAACCGGGAAGCCGAGGTCTTTGGAGAGACTGTAGACGATGTGTACACGTTCGGCGTTTTTATAGCCGCGAGATTCCAAAACCTCGGCGACGCTTGTGAACTCGTCGGGGGAGAAAACGGAACCGGAATAGATTTCGTCGGATACGAGATGGATGTTTTGCGTGTAACGAAATCTAGAATGTCTTCGATTGTGGACCGTTGGATCGTTGCTCCGAGTGGATTTGATGGGTTGTGA

Coding sequence (CDS)

ATCGTGCCGACTCTGAACCGGGAAGCCGAGGTCTTTGGAGAGACTGTAGACGATGTGTACACGTTCGGCGTTTTTATAGCCGCGAGATTCCAAAACCTCGGCGACGCTTGTGAACTCGTCGGGGGAGAAAACGGAACCGGAATAGATTTCGTCGGATACGAGATGGATGTTTTGCGTGTAACGAAATCTAGAATGTCTTCGATTGTGGACCGTTGGATCGTTGCTCCGAGTGGATTTGATGGGTTGTGA

Protein sequence

IVPTLNREAEVFGETVDDVYTFGVFIAARFQNLGDACELVGGENGTGIDFVGYEMDVLRVTKSRMSSIVDRWIVAPSGFDGL*
Homology
[Close]
BLAST of CsaV3_1G026580 vs. NCBI nr
Match: KAE8652985.1 (hypothetical protein Csa_023498, partial [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 1.9e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  IVPTLNREAEVFGETVDDVYTFGVFIAARFQNLGDACELVGGENGTGIDFVGYEMDVLRV 60
          IVPTLNREAEVFGETVDDVYTFGVFIAARFQNLGDACELVGGENGTGIDFVGYEMDVLRV
Sbjct: 1  IVPTLNREAEVFGETVDDVYTFGVFIAARFQNLGDACELVGGENGTGIDFVGYEMDVLRV 60

Query: 61 TKSRMSSIVDRWIVAPSGFDGL 83
          TKSRMSSIVDRWIVAPSGFDGL
Sbjct: 61 TKSRMSSIVDRWIVAPSGFDGL 82

[Close]
BLAST of CsaV3_1G026580 vs. NCBI nr
Match: KAF7819716.1 (hypothetical protein G2W53_025171 [Senna tora])

HSP 1 Score: 57.8 bits (138), Expect = 5.3e-05
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 0 

Query: 7   REAEVFGETVDDVYTFGVFIAARFQNLGDACELVGGENGTGIDFVGYEMDVLRVTKSRMS 66
           REA+V GE V +V +  V +AA  ++L  A EL  GE GT +D VGY+MDVL  +  R+ 
Sbjct: 75  REAQVLGEAVHNVDSLRVLVAAGLEDLRHAGELARGEGGTRVDLVGYQMDVLHASYLRVE 134

Query: 67  SI 69
            +
Sbjct: 135 GL 136

The following BLAST results are available for this feature:
BLAST of CsaV3_1G026580 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652985.11.9e-39100.00hypothetical protein Csa_023498, partial [Cucumis sativus][more]
KAF7819716.15.3e-0545.16hypothetical protein G2W53_025171 [Senna tora][more]
BLAST of CsaV3_1G026580 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G026580 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G026580 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G026580.1CsaV3_1G026580.1mRNA