CsaV3_1G024270 (gene) Cucumber (Chinese Long) v3

BLAST of CsaV3_1G024270 vs. NCBI nr
Match: KAE8652954.1 (hypothetical protein Csa_017771 [Cucumis sativus])

HSP 1 Score: 397.5 bits (1020), Expect = 6.8e-107
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0

Query: 1   MASSSSTLNHGTSSSSRNYSIIINPGHHLTVIKLTDNNYLTWKLQILNTIYGHSLENHIL 60
           MASSSSTLNHGTSSSSRNYSIIINPGHHLTVIKLTDNNYLTWKLQILNTIYGHSLENHIL
Sbjct: 1   MASSSSTLNHGTSSSSRNYSIIINPGHHLTVIKLTDNNYLTWKLQILNTIYGHSLENHIL 60

Query: 61  SDSKPEKMRLTSVEVERNTKNTENDSERNTNREDLIENPKYISWMRQDRLICYWLMGSMN 120
           SDSKPEKMRLTSVEVERNTKNTENDSERNTNREDLIENPKYISWMRQDRLICYWLMGSMN
Sbjct: 61  SDSKPEKMRLTSVEVERNTKNTENDSERNTNREDLIENPKYISWMRQDRLICYWLMGSMN 120

Query: 121 EDIVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAKVKNLV 180
           EDIVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAKVKNLV
Sbjct: 121 EDIVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAKVKNLV 180

Query: 181 SALKEFTGNTPSGMPRFNNQN 202
           SALKEFTGNTPSGMPRFNNQN
Sbjct: 181 SALKEFTGNTPSGMPRFNNQN 201

BLAST of CsaV3_1G024270 vs. NCBI nr
Match: KAA0026150.1 (uncharacterized protein E6C27_scaffold19G001020 [Cucumis melo var. makuwa] >TYK11610.1 uncharacterized protein E5676_scaffold263G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-54
Identity = 127/201 (63.18%), Postives = 140/201 (69.65%), Query Frame = 0

Query: 1   MASSSSTLNHGTSSSSRNYSIIINPGHHLTVIKLTDNNYLTWKLQILNTIYGHSLENHIL 60
           MASSSSTLNHGTSSSSRN S+IINP HHLTVIKL +NNYLTWKLQILNT+ GH LENHIL
Sbjct: 1   MASSSSTLNHGTSSSSRNNSLIINPLHHLTVIKL-NNNYLTWKLQILNTVNGHFLENHIL 60

Query: 61  SDSKPEKMRLTSVEVERNTKNTENDSERNTNREDLIENPKYISWMRQDRLICYWLMGSMN 120
           SDSKPEKMR TSVEVERN +NTE + +RNTNRE+LI+NP+YI WMRQDRLIC WLMGSMN
Sbjct: 61  SDSKPEKMRSTSVEVERNIENTETNPKRNTNREELIDNPEYIIWMRQDRLICSWLMGSMN 120

Query: 121 EDIVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAKVKNLV 180
           EDIVTQMIGC                                      +R Y+    N  
Sbjct: 121 EDIVTQMIGC--------------------------------------MRCYSLYDPNF- 159

Query: 181 SALKEFTGNTPSGMPRFNNQN 202
              K+FT NTP GMP+FNNQN
Sbjct: 181 --QKQFTSNTPPGMPKFNNQN 159

BLAST of CsaV3_1G024270 vs. NCBI nr
Match: XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia])

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-27
Identity = 73/181 (40.33%), Postives = 114/181 (62.98%), Query Frame = 0

Query: 3   SSSSTLNHGTSSSSRNYSIIINPGHHLTVIKLTDNNYLTWKLQILNTIYGHSLENHILSD 62
           +S S++ +  ++     S  INPG  +++++L D+N L WK QI   + G+ LE++I  D
Sbjct: 2   ASLSSIRNSDAARIIQASKTINPGSKVSIVRLNDDNXLLWKFQIRTALQGNGLESYI--D 61

Query: 63  SKPEKMRLTSVEVERNTKNTENDSERNTNREDLIENPKYISWMRQDRLICYWLMGSMNED 122
           S  +    T  +  + T++  + S        L +NP Y  W++QD+LI  WL+GSMNED
Sbjct: 62  SNED----TPAQFVQTTEDESSSS-------SLQQNPAYFEWIKQDKLISAWLLGSMNED 121

Query: 123 IVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAKVKNLVSA 182
           I++QM+ C +AREIW  LE  ++S   A++MQLK +L+N KKGN S++DY  K+KNLV +
Sbjct: 122 ILSQMLDCKSAREIWTVLECMFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIKNLVDS 169

Query: 183 L 184
           L
Sbjct: 182 L 169

BLAST of CsaV3_1G024270 vs. NCBI nr
Match: KAE8646002.1 (hypothetical protein Csa_015461 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 7.7e-26
Identity = 64/70 (91.43%), Postives = 64/70 (91.43%), Query Frame = 0

Query: 116 MGSMNEDIVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAK 175
           MGSMNED VTQMIGCNT REIWLTLEQTY SSNT KIMQLKGQLQNLKKGNQSIRDYT K
Sbjct: 1   MGSMNEDTVTQMIGCNTTREIWLTLEQTYFSSNTTKIMQLKGQLQNLKKGNQSIRDYTTK 60

Query: 176 VKNLVSALKE 186
           VKNLVSAL E
Sbjct: 61  VKNLVSALNE 70

BLAST of CsaV3_1G024270 vs. NCBI nr
Match: KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 121.7 bits (304), Expect = 7.2e-24
Identity = 71/183 (38.80%), Postives = 106/183 (57.92%), Query Frame = 0

Query: 1   MASSSSTLNHGTSSSSRNYSIIINPGHHLTVIKLTDNNYLTWKLQILNTIYGHSLENHIL 60
           M+S+SS L    + +S   + I   G+ ++++KL D+ +L WK QIL  +  + LEN + 
Sbjct: 1   MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLE 60

Query: 61  SDSKPEKMRLTSVEVERNTKNTENDSERNTNREDLIENPKYISWMRQDRLICYWLMGSMN 120
           S+S+P    L S         TE+ S   T       NP Y  W RQDRLI  WL+GSM+
Sbjct: 61  SESEPPSKYLIS---------TESSSASATG----TPNPAYKVWKRQDRLISSWLLGSMS 120

Query: 121 EDIVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAKVKNLV 180
           E+I+ QM+ C +A+EIW TL+  +SS   A+ MQ K +L N+KKG+  +++Y  K+   V
Sbjct: 121 EEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCV 170

Query: 181 SAL 184
            AL
Sbjct: 181 DAL 170

BLAST of CsaV3_1G024270 vs. ExPASy TrEMBL
Match: A0A5D3CJL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00550 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 5.0e-55
Identity = 127/201 (63.18%), Postives = 140/201 (69.65%), Query Frame = 0

Query: 1   MASSSSTLNHGTSSSSRNYSIIINPGHHLTVIKLTDNNYLTWKLQILNTIYGHSLENHIL 60
           MASSSSTLNHGTSSSSRN S+IINP HHLTVIKL +NNYLTWKLQILNT+ GH LENHIL
Sbjct: 1   MASSSSTLNHGTSSSSRNNSLIINPLHHLTVIKL-NNNYLTWKLQILNTVNGHFLENHIL 60

Query: 61  SDSKPEKMRLTSVEVERNTKNTENDSERNTNREDLIENPKYISWMRQDRLICYWLMGSMN 120
           SDSKPEKMR TSVEVERN +NTE + +RNTNRE+LI+NP+YI WMRQDRLIC WLMGSMN
Sbjct: 61  SDSKPEKMRSTSVEVERNIENTETNPKRNTNREELIDNPEYIIWMRQDRLICSWLMGSMN 120

Query: 121 EDIVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAKVKNLV 180
           EDIVTQMIGC                                      +R Y+    N  
Sbjct: 121 EDIVTQMIGC--------------------------------------MRCYSLYDPNF- 159

Query: 181 SALKEFTGNTPSGMPRFNNQN 202
              K+FT NTP GMP+FNNQN
Sbjct: 181 --QKQFTSNTPPGMPKFNNQN 159

BLAST of CsaV3_1G024270 vs. ExPASy TrEMBL
Match: A0A6J1DLT9 (uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021757 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.5e-27
Identity = 73/181 (40.33%), Postives = 114/181 (62.98%), Query Frame = 0

Query: 3   SSSSTLNHGTSSSSRNYSIIINPGHHLTVIKLTDNNYLTWKLQILNTIYGHSLENHILSD 62
           +S S++ +  ++     S  INPG  +++++L D+N L WK QI   + G+ LE++I  D
Sbjct: 2   ASLSSIRNSDAARIIQASKTINPGSKVSIVRLNDDNXLLWKFQIRTALQGNGLESYI--D 61

Query: 63  SKPEKMRLTSVEVERNTKNTENDSERNTNREDLIENPKYISWMRQDRLICYWLMGSMNED 122
           S  +    T  +  + T++  + S        L +NP Y  W++QD+LI  WL+GSMNED
Sbjct: 62  SNED----TPAQFVQTTEDESSSS-------SLQQNPAYFEWIKQDKLISAWLLGSMNED 121

Query: 123 IVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAKVKNLVSA 182
           I++QM+ C +AREIW  LE  ++S   A++MQLK +L+N KKGN S++DY  K+KNLV +
Sbjct: 122 ILSQMLDCKSAREIWTVLECMFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIKNLVDS 169

Query: 183 L 184
           L
Sbjct: 182 L 169

BLAST of CsaV3_1G024270 vs. ExPASy TrEMBL
Match: A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.5e-24
Identity = 71/183 (38.80%), Postives = 106/183 (57.92%), Query Frame = 0

Query: 1   MASSSSTLNHGTSSSSRNYSIIINPGHHLTVIKLTDNNYLTWKLQILNTIYGHSLENHIL 60
           M+S+SS L    + +S   + I   G+ ++++KL D+ +L WK QIL  +  + LEN + 
Sbjct: 1   MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLE 60

Query: 61  SDSKPEKMRLTSVEVERNTKNTENDSERNTNREDLIENPKYISWMRQDRLICYWLMGSMN 120
           S+S+P    L S         TE+ S   T       NP Y  W RQDRLI  WL+GSM+
Sbjct: 61  SESEPPSKYLIS---------TESSSASATG----TPNPAYKVWKRQDRLISSWLLGSMS 120

Query: 121 EDIVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAKVKNLV 180
           E+I+ QM+ C +A+EIW TL+  +SS   A+ MQ K +L N+KKG+  +++Y  K+   V
Sbjct: 121 EEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCV 170

Query: 181 SAL 184
            AL
Sbjct: 181 DAL 170

BLAST of CsaV3_1G024270 vs. ExPASy TrEMBL
Match: A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.5e-24
Identity = 71/183 (38.80%), Postives = 106/183 (57.92%), Query Frame = 0

Query: 1   MASSSSTLNHGTSSSSRNYSIIINPGHHLTVIKLTDNNYLTWKLQILNTIYGHSLENHIL 60
           M+S+SS L    + +S   + I   G+ ++++KL D+ +L WK QIL  +  + LEN + 
Sbjct: 1   MSSTSSLLGVENTEASSPINQIFGSGNKISLVKLNDDTFLLWKFQILTALEAYDLENFLE 60

Query: 61  SDSKPEKMRLTSVEVERNTKNTENDSERNTNREDLIENPKYISWMRQDRLICYWLMGSMN 120
           S+S+P    L S         TE+ S   T       NP Y  W RQDRLI  WL+GSM+
Sbjct: 61  SESEPPSKYLIS---------TESSSASATG----TPNPAYKVWKRQDRLISSWLLGSMS 120

Query: 121 EDIVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAKVKNLV 180
           E+I+ QM+ C +A+EIW TL+  +SS   A+ MQ K +L N+KKG+  +++Y  K+   V
Sbjct: 121 EEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQCV 170

Query: 181 SAL 184
            AL
Sbjct: 181 DAL 170

BLAST of CsaV3_1G024270 vs. ExPASy TrEMBL
Match: A0A5A7UB21 (Keratin, type II cytoskeletal 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1486G00150 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-22
Identity = 69/183 (37.70%), Postives = 107/183 (58.47%), Query Frame = 0

Query: 1   MASSSSTLNHGTSSSSRNYSIIINPGHHLTVIKLTDNNYLTWKLQILNTIYGHSLENHIL 60
           M+S+SS L    +  S     I   G+ ++++KL+D+N+L WK QIL  +  + LEN   
Sbjct: 1   MSSNSSPLGVENTEVS-----IFGSGNKISLVKLSDDNFLLWKFQILTALEAYDLENFFE 60

Query: 61  SDSKPEKMRLTSVEVERNTKNTENDSERNTNREDLIENPKYISWMRQDRLICYWLMGSMN 120
           S+ +P    LTS      T ++   + R         NP+Y  W R +RLI  WL+GSM+
Sbjct: 61  SELEPPSKYLTS------TGSSSTSATRT-------PNPEYKVWKRHNRLISPWLLGSMS 120

Query: 121 EDIVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQNLKKGNQSIRDYTAKVKNLV 180
           E+I+ QM+ C +A+EIW TL+  +SS   A+ MQ K +L N+KKG+ S+++Y  K++  V
Sbjct: 121 EEILNQMVHCKSAKEIWGTLQGIFSSRYLAQAMQFKNKLHNIKKGSMSLKEYFLKIQQCV 165

Query: 181 SAL 184
            AL
Sbjct: 181 DAL 165

BLAST of CsaV3_1G024270 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-08
Identity = 25/89 (28.09%), Postives = 48/89 (53.93%), Query Frame = 0

Query: 98  NPKYISWMRQDRLICYWLMGSMNEDIVTQMIGCNTAREIWLTLEQTYSSSNTAKIMQLKG 157
           +P Y  W + + ++ YWLM SM + ++  ++   TA ++W  L + +      KI QL+ 
Sbjct: 73  SPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRR 132

Query: 158 QLQNLKKGNQSIRDYTAKVKNLVSALKEF 187
           +L  L++G  S+ +Y  K+  +   L E+
Sbjct: 133 RLATLRQGGDSVEEYFGKLSKVWMELSEY 161

BLAST of CsaV3_1G024270 vs. TAIR 10
Match: AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 8.6e-07
Identity = 24/82 (29.27%), Postives = 48/82 (58.54%), Query Frame = 0

Query: 104 WMRQDRLICYWLMGSMNEDIVTQMI--GCNTAREIWLTLEQTYSSSNTAKIMQLKGQLQN 163
           W  +D L+  W+ G++ + ++  +I  GC TAR++WL+LE  +  +  A+ +Q + +L+ 
Sbjct: 67  WKERDGLVKMWIYGTITDSLLDTIIKVGC-TARDLWLSLENLFRDNKEARALQFENELRT 126

Query: 164 LKKGNQSIRDYTAKVKNLVSAL 184
               + S+ +Y  K+K+L   L
Sbjct: 127 TTIDDLSVHEYCQKLKSLSDLL 147