CsaV3_1G017000 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G017000
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	tobamovirus multiplication protein 2A
Location	chr1: 11508376 .. 11514477 (-)
RNA-Seq Expression	CsaV3_1G017000
Synteny	CsaV3_1G017000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCATTTGCCAACTGGCCTCAACAGAGCTGGACCGTCTTTCTAATTCCATTTTCTCTTTTCTCTCTTTCTCTCTCATTTCAAGGTCCGGAAAAGCGAGCAATCTGATTATCATCTTCTCTCAATTTGTAAGTTCTCCGATTTCTTCCTTCATCCTCTTTAATTTTCAGCTAGATTATGCCCGCTTTCGATGTTTATTTGAAGAATTTTGCATGATTTCATTCTAAAGGCGGAGAATTGGGATATCGAGATAGAATTGTGCTGTTTTTTATATTAATTCCACTTTGATTGTTGTTTTATGGGGAAGGGAAGTGTTTATTTGAAGTTGTGAGGATTTTATTAGTTCAGGTGTTTTGGAAATTTGAAGTTTTTGTAGTTTGATTATAGGTGAGGATCCGTTTTTGTTTTATTTTTTTAATGGAGAATTTCGTGTTCGGATTCTTTAAGTTTGGGATATTGAAGCTAGTTCTATGTATTAAGAAATTGTTGGGTTATTTTTATTTTTTATTATTGGATATTAATTAGGGTTCTAATGCATGTAAGATGCATATTTGAAATGTTGTTTTAGGGATCGGAAGTACAGAGAGGATGGCCTGCAGAGGGTGCTTTGAGTGCCTATTGAAGCTTTTGAACTTCTTCTTGTCCCTGCTGGGTCTTGCCATGGTGGGCTATGGGATTTACTTATTGGTTGAGTACTTGCAATCTCATAGTGATGTTCCAGGACCTTCGTTGAGTGGTGATCATGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCTGTGTCTCTGTCTTCTAGCATCTTTGACAACCTTCCAAAAGCCTGGTATGAGTTTTACTTTTAAATGTAACCGTTTAAGTTGTAACATGTATGTTTCCTGCTGCTTGTAATTGCTGAATTTAGGAAGCAAAATATTCTGGAAAGTTACGAAGGGCATGATTGAGCTTCATAAATCATTGGTTTAGTGGCCATGAGCCCCGGAGCCCCATCTTCACCCTCCCCAATTTCTGGTGTAAGAATAGGATAACCTTTTAAAAAAGAAAAGGTAAAAAAAACAAACAGACCATGAACCTGAAGGATCAAGTAACATGAACCAACGCTGTGGTGAGTTTATGAAGTAACTGAATTAGGGTTCCACTCATTGACGATTTAAAAATTATGGATTTCCCACACATTCCACAATACTGCTTTATCCCTCAGGTTGAGCTGATGATTATAGCATGGATAACTCCTTCCAATTCAGGAACTGTGTTTTTTTTTGCCCCAGAAAGAACCAAATCCATAAAATCTCTTCAAGACTACAATCACATAACATACTTACACGAGTTAAAGAAGAGAAGTATTGATAGGGTTTTTAGTGGGCCAACTGGTTCGAATGCTCACATACATTTATAAAATTTATAAATAAAAATGAGCATAGGATATGGTTGTCCGCTATAATTTTTGACAGCAGACACAATTTAAGTGTATCAGTGAACAGTGTTTTGAAAGGTGCGGCCAGACGCGTGCCTAGGCCCAAGTCGCACGGCTTGGGCTTCTCCTTGAACAGGCGAGGCGTTGTGCATTTGGCGCGCGACTTACATGAGGTGCAAAGGTGCCAAAGGCTCTTGAGGCGCGAGCTTTTCACTCAGTTGTGGGCTGGGCTTTAATATATATATATATATATAACCTAATTACATGTCTTTTGAGTTAAGAAACATCCCAACTTTACGTTCCCAACTCTTCGTCTCATTTTTACCATAGTTATATACTTATAGTTTATACATTGTTGCTCCTTTCAATTTTGTAGATACAACATATACATACATACATACATATATATACATATACACACACACACACACATATATTCTTTATATATAGTGCGCCTCATGAAAAAAAACCTGTGCCTTTTTGTGCACCTTGCACCTAGACTCCAGAGGGCCATTGCGCCTTAGTACGCCTTGAGTCTTTTAAAACACTGTCAGTGATTTACAATCAACTTAGAGATTTTCTTTATTGTAGATATTGAATAGGAATTGCTAACCGGTAATGTTATAAATTTTCAACCACTATTCTTGTTGCTTAATTTCTTGGAAACTCAAGCCAGTTTATTGACAGTCTCCGCTATATATTGGAACTGGTGTACAAATTGATCTGCAGTACATTGCATTAAGTATTGTTGAGAATATAAGATATCTCGTTGTAAAATGATGGTATGCCATATCAAAAGAATTGGATGTGAGTTGTGACATCTTTGCCTCTTCTTCTTCTTCTCCTTCTTTTTGTAATAATAGAAAAGGCTTGTCTCTGTTTAAAAAAAAAAACAAATTTTTAATCTGAAAGGACTCCATTCCCTCAATCTTCAAACACAAGCAAATTCATATTGTCAGTCAGTACATTTTAGCAGCCATAGATGATAAAATAATATGAATATTTTTTAATCTGATTAATCTGTTTCTTTTATTTTAATTCTTTTGCAGGTTCATATATTTGTTCATTGCTACGGGAGTCACTATCTTTGTTGTCTCTTGTTTTGGCTGTATTGGAGCTGCAACACGTAGTGGATGCTGTTTAAGTTGTGTATCCTATTTGCCTGCATGTCTGGATTGTTGTTTGATTTATCAATTATTGATGAAACAATTAGGCCACCAGGGAACAACTTGTTGGTATTCGGATAATTACACTATTCATAGAAATAAGATGGTGATACTAAATATAATACATGTTAATGATAACAAATAAAGTTGAATCTAAAAGGTTTGATATCTGTTGTCATTTGAGTTTTAAATTACCATATCCTTAACGATCACAGTATTCGATTTTATTGCTTCTACTGATTTTGGTTCAACTAGGATGTGGTGCCTTCATATTCTTTGACAAAAATTGGAGAGATGTGAGTATTTGTTCACAAACTAAAATTTAACATATAAGTTTATTTTCTTATGCTCTGTTTTCTTATCCTGAAGGAAATTCCTGGGGACAGAACAGGAAACTTTGATAAGATCTATGAACTTCTGGAAAGCAAGTGGGAAATCATCAGATGGGTTGCACTAGGAACTATAATTTTTGAGGTACGTGAACCCCTTTTTGGAGTGTTTGAATCTTAGACTAGCATGATGGCAGACATCGTTGGGTAAAAGAGCCTAGTGATGATCTAACCTCTTAACTAAGCGATGCTCTAACCCCATAACTAAGAGGGCTAACATAGCAGAAATGTTGATTATCCCTGAACTTTTGTAAGTGTATCAATTTACAACCTTTAGGTTTTGTTTGAAAAACACTGTATGAATCTTAGAACTTTTAGCTATCAAAATCTTGAAATTTCAAATTCGAGTCAATTTAGATTTTTCATTATGACTACCTTTGAAAATCGTCGTTCCATTAATTTTCACACGTGTAAACTTCTCCAAATGTTGGTTTTACAAAATGGACAATTATAATTGAAGCATGGATACTTCTAAAGAGAAATCCAAACTAAGCATTTTAGTTGATTCACTAACGAAAGTTTGGGGGTTTTATTAATACAATTAAGTATCACACGTTGTTTTTTCAAACAAATGTAATGTTTTTTATTAATACAACTCCTAAAGTTTATCAATATAATTTGATATCTTCCCTTGATATAATGATTAATAGAATATATCATTAGAAAACTTTGATTTAATTATTGAATGGATATGTAGCAATAATCAATGTGCTAATCTCAATAAGATGGTTCATTTATGTTTTTAGATTCAAATGACGTTTGAAATTCTTGTTCTTTTTATGATCTGGGTTTAATCTTATTTTATTCTTTTTAGTTATCTACTCTTTACTGAAATTCTCTCACCAACAATGTGTACTTTTACACCCTTCATTAAATTTTAGAGATCCATTTCTTTGTCTTGTGAATTTTGGTTTAGAGGATTTTTTTTTTCAGGATGAGTTTAACATATGTGATTGGTCGGGTTTTTAATTCCAATTTATGATTTCGTATTAATTCATTTTACTTTTACACCAATGATAATATTTGTTGTGTTGATCACAAGAGAACTCACAACTTGTAATACTTGAAATGTTGCTTCAACATAGTTGGGTTTACTTCCGTTTTTCTCCTAATTGATTTAATAACTGTAAGCTTTTTAGTTTTCCCTAAGCCACATAGCTACGAATTCCCTTTTATTGCTTGCACTGATTATATCTCCTTTTTTTTCTCTCCCAATGAGAACAAAAGTTCCACTTTGTAATAATACAATGTCTTGATAGATTTCTTTACACAAATTTCTTTTGTAAATACAACCTTTTAATTCGTCAGTGACAATGATCGGAAGGCTCTCATAGTTTTTGTTTCAGTGTGCCCTCTACCTCTGTCCATAGGTCGATCTTGCTCTTTTTCGAACATCATCCTTTTGTTTCTTAACCAAAAAAATTACTGTTTCATTGTATTTGCAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGACCTGTAGACTATGACAGTGATGATGAATACATTGCTCCAAGGCAACAAATCCGACAACCGTTGATCAATAGGCCCGTTGCTCCAGCAACAGGTGTGCCTGTTGCTGGGACACTTGATCAACGACCAAGTCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGGTATAACCTTCTCAACGTTGAATTTTCCCACTGAAAATAATGACAATGTAAAGATATACAAGTCAACGACAAATTTTCCTTTCTTTCTATTCTTTCATTTACTATAGGATAAGAAATTGATCCTGATATTAATCAAATAGCTAAAATATAGAGGAAATTCGTGATATTTAGACCTTCTCACTTTAACCCACTAAACAATTGCCTACCTTCTACTCCTCTCACTCATTCTATTTAGTCAACTCCCACTAACAAACTCCTTGGCTAAGTATTATTGTCTTTAATTCCCTAATAATATTTCTAGCCACTCAAATATCTTTCTTTTCAGATACTAGGACTTCTCATGACACTTTATCATAGTGTGTATTTATGTTGGGAGATTCCTTTTGAAGTCGGTATAAATATGTCAGACGAGGGAAATTTCATTGTTAAATAGTCTTTTTGTTTCCCCAAGAATCTTAAGTGGCATCTTTTTGCCTACCTACTATACTGATAAACCCTTGACCTTTTGATTCTAATTTGGATGTCGTCATTGGTTCACATTGAGTTTTATACAACACAGCTCTTAATTGGAGATTTGCATGGAAGCTTTGTCCCGGACCATGAACTACTTCATATATGATCTGATGGCATGTTCTTTTCACAATTTTTTTCCATTCTGACTTTGTTCTTTTTATTTTTGAAACAGTATGGGCTGGATACTTCGGAGTTCACGTACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCTCCTCAGCCAGCCGAAGAAAAGAGCCGCTGCACAATCATGTGATAAAAGTATGCCTTGTACTATTTGTTTCTCACTCCACTGTAGTGTTTTAGCGGGTCCGAATGCTTGTGCCCGCTTGTGTTCACTTGTGTATAACCAAGAGGTTTTTCCAGAGGCTTTACTTGTGTAACCTTAACTTTTCAGAAAAAAAAAAGTTGTGACTATTTTTGTGTGAAACCATTCTTCTACATTTGGATTTGTCCTTTTGTTCAAGATGGAATGGGTCAGTATAGGACCAAGGAAAATGATTGTAAGCTCCATCTCAATTGTGGAAAAACTGCTTGCTGGAAGTTACTTTTAATTGTGAGTTCAATCCAAAGTAAATATGAAATGTTATTATGAGTCATGCTAGGCCTCTGCTCTCCTTGAGTCCTCTCGACTTCAATGGATGACCGAATACTTATTCGATAACTGCTAGTGTTTCCATTTTTCTGTTGTGCCAACTTTTGTTGCTTTGTTTCTGCTTTGTTCTGTGTACAAAGAATGAGGAGTTGAACCACCCTTTTTTGCTTTAGCTATTTACAAGAGTTTGAGTCGGCCTTAAAGTTTGGATGTTGATGTTAGGAACTTTGTTATCTCAAACTAGTGGTTTTGACTTTTGAAACTTGTGTTTGTTTTGATATAAATGTAACTAAACCATTGCCTTTGACTATCTAATTTGTAGATACAATCAGCATTAATCAATTAATG

mRNA sequence

ATGGCCTGCAGAGGGTGCTTTGAGTGCCTATTGAAGCTTTTGAACTTCTTCTTGTCCCTGCTGGGTCTTGCCATGGTGGGCTATGGGATTTACTTATTGGTTGAGTACTTGCAATCTCATAGTGATGTTCCAGGACCTTCGTTGAGTGGTGATCATGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCTGTGTCTCTGTCTTCTAGCATCTTTGACAACCTTCCAAAAGCCTGGTTCATATATTTGTTCATTGCTACGGGAGTCACTATCTTTGTTGTCTCTTGTTTTGGCTGTATTGGAGCTGCAACACGTAGTGGATGCTGTTTAAGTTGTTATTCGATTTTATTGCTTCTACTGATTTTGGTTCAACTAGGATGTGGTGCCTTCATATTCTTTGACAAAAATTGGAGAGATGAAATTCCTGGGGACAGAACAGGAAACTTTGATAAGATCTATGAACTTCTGGAAAGCAAGTGGGAAATCATCAGATGGGTTGCACTAGGAACTATAATTTTTGAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGACCTGTAGACTATGACAGTGATGATGAATACATTGCTCCAAGGCAACAAATCCGACAACCGTTGATCAATAGGCCCGTTGCTCCAGCAACAGGTGTGCCTGTTGCTGGGACACTTGATCAACGACCAAGTCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCGGAGTTCACGTACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCTCCTCAGCCAGCCGAAGAAAAGAGCCGCTGCACAATCATGTGA

Coding sequence (CDS)

ATGGCCTGCAGAGGGTGCTTTGAGTGCCTATTGAAGCTTTTGAACTTCTTCTTGTCCCTGCTGGGTCTTGCCATGGTGGGCTATGGGATTTACTTATTGGTTGAGTACTTGCAATCTCATAGTGATGTTCCAGGACCTTCGTTGAGTGGTGATCATGATCTGGTCCAGCTTGGTCGACCAATGCTAATGGCTGTGTCTCTGTCTTCTAGCATCTTTGACAACCTTCCAAAAGCCTGGTTCATATATTTGTTCATTGCTACGGGAGTCACTATCTTTGTTGTCTCTTGTTTTGGCTGTATTGGAGCTGCAACACGTAGTGGATGCTGTTTAAGTTGTTATTCGATTTTATTGCTTCTACTGATTTTGGTTCAACTAGGATGTGGTGCCTTCATATTCTTTGACAAAAATTGGAGAGATGAAATTCCTGGGGACAGAACAGGAAACTTTGATAAGATCTATGAACTTCTGGAAAGCAAGTGGGAAATCATCAGATGGGTTGCACTAGGAACTATAATTTTTGAGGCTCTCCTTTTCTTGTTGGCTCTTGTGGTTCGTGCAGCAAACAGACCTGTAGACTATGACAGTGATGATGAATACATTGCTCCAAGGCAACAAATCCGACAACCGTTGATCAATAGGCCCGTTGCTCCAGCAACAGGTGTGCCTGTTGCTGGGACACTTGATCAACGACCAAGTCGAAATGATGCTTGGAGTACACGAATGAGGGAAAAGTATGGGCTGGATACTTCGGAGTTCACGTACAACCCATCTGAGTCTCACAGGTTTCAGCAAGTTGCTCCTCAGCCAGCCGAAGAAAAGAGCCGCTGCACAATCATGTGA

Protein sequence

MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRPMLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLLILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLLALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM*

Homology

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BLAST of CsaV3_1G017000 vs. NCBI nr
Match: XP_004148498.1 (tobamovirus multiplication protein 2A [Cucumis sativus] >XP_031735959.1 tobamovirus multiplication protein 2A-like [Cucumis sativus] >XP_031735960.1 tobamovirus multiplication protein 2A-like [Cucumis sativus] >KAE8652859.1 hypothetical protein Csa_013010 [Cucumis sativus] >KGN60424.1 hypothetical protein Csa_000908 [Cucumis sativus])

HSP 1 Score: 560.8 bits (1444), Expect = 6.5e-156
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL
Sbjct: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL
Sbjct: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR
Sbjct: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. NCBI nr
Match: XP_008465936.1 (PREDICTED: tobamovirus multiplication protein 2A [Cucumis melo] >TYK31133.1 tobamovirus multiplication protein 2A [Cucumis melo var. makuwa])

HSP 1 Score: 542.3 bits (1396), Expect = 2.4e-150
Identity = 269/279 (96.42%), Postives = 274/279 (98.21%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVPGPSLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPGPSLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLPKAWFIYLFIATGV +FVVSCFGCIGAATRSGCCLSCYSILLLLL
Sbjct: 61  MLMAVSLSSNIFDNLPKAWFIYLFIATGVIVFVVSCFGCIGAATRSGCCLSCYSILLLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDKNWRDEIPGD+TGNFDKIYELLE+KW+IIRWVALGTIIFEALLFLL
Sbjct: 121 ILVQLGCAAFIFFDKNWRDEIPGDKTGNFDKIYELLENKWKIIRWVALGTIIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWS R
Sbjct: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSAR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQ AEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQAAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. NCBI nr
Match: KAA0038536.1 (tobamovirus multiplication protein 2A [Cucumis melo var. makuwa])

HSP 1 Score: 542.3 bits (1396), Expect = 2.4e-150
Identity = 269/279 (96.42%), Postives = 274/279 (98.21%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVPGPSLSGDHDLVQLGRP
Sbjct: 90  MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPGPSLSGDHDLVQLGRP 149

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLPKAWFIYLFIATGV +FVVSCFGCIGAATRSGCCLSCYSILLLLL
Sbjct: 150 MLMAVSLSSNIFDNLPKAWFIYLFIATGVIVFVVSCFGCIGAATRSGCCLSCYSILLLLL 209

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDKNWRDEIPGD+TGNFDKIYELLE+KW+IIRWVALGTIIFEALLFLL
Sbjct: 210 ILVQLGCAAFIFFDKNWRDEIPGDKTGNFDKIYELLENKWKIIRWVALGTIIFEALLFLL 269

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWS R
Sbjct: 270 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSAR 329

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQ AEEKSRCTIM
Sbjct: 330 MREKYGLDTSEFTYNPSESHRFQQVAPQAAEEKSRCTIM 368

[Close]

BLAST of CsaV3_1G017000 vs. NCBI nr
Match: XP_038877822.1 (tobamovirus multiplication protein 2A [Benincasa hispida])

HSP 1 Score: 538.5 bits (1386), Expect = 3.4e-149
Identity = 265/279 (94.98%), Postives = 272/279 (97.49%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLS+LGLA+VGYGIYLLVEYLQS SDVPGPSLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSVLGLAVVGYGIYLLVEYLQSPSDVPGPSLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+ FDNLPKAWFIYLFIA GV IFVVSCFGCIGAATR+GCCLSCYS+LLLLL
Sbjct: 61  MLMAVSLSSNFFDNLPKAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCYSVLLLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDKNWRDEIPGD+TGNFDKIYELLE KWEIIRWVALG +IFEALLFLL
Sbjct: 121 ILVQLGCAAFIFFDKNWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR
Sbjct: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. NCBI nr
Match: XP_023533384.1 (tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 532.3 bits (1370), Expect = 2.5e-147
Identity = 261/279 (93.55%), Postives = 271/279 (97.13%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVP P LSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLP+AWFIYLFIA GV IFVVSCFGCIGAATR+GCCLSCYS+L+LLL
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCYSVLVLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDK+WRDEIPGDRTGNFDKIYELLE KWEIIRWVALG +IFEALLFLL
Sbjct: 121 ILVQLGCAAFIFFDKHWRDEIPGDRTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRP+DYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR
Sbjct: 181 ALVVRAANRPLDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. ExPASy Swiss-Prot
Match: Q9C5W7 (Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A PE=1 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 4.0e-116
Identity = 203/280 (72.50%), Postives = 230/280 (82.14%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SHSDVPGPSLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL VEY + + + V     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLL 120
           P+LMAVSLSS+IFDNLPKAWFIYLFI  GV +FV+SC GC+G  +RS CCLSCYS+LL+L
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLIL 120

Query: 121 LILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFL 180
           LILV+LG  AFIFFD +WRDE+P DRTGNFD IY  L   W+I+RWVALG ++FEALLFL
Sbjct: 121 LILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFL 180

Query: 181 LALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWST 240
           LAL+VRAAN P +YDSDDEY+APRQQIRQP INR  AP TGVPVA TLDQRPSR+D WS 
Sbjct: 181 LALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSA 240

Query: 241 RMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           RMREKYGLDTSEFTYNPSESHRFQQ+  QP EEK RCTIM
Sbjct: 241 RMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of CsaV3_1G017000 vs. ExPASy Swiss-Prot
Match: Q93XY5 (Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.3e-28
Identity = 87/269 (32.34%), Postives = 134/269 (49.81%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSL---SGDHDLVQLGR 62
           C   F   LK+LNF  + +G++++ Y I++L EY +     P PS    SG      +  
Sbjct: 6   CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65

Query: 63  PMLMAVSLSSSIF--------------DNLPKAWFIYLFIATGVTIFVVSCFGCIGAATR 122
           P+   +   +SI                +LP  WFIY F+A G+ + +V+  G I A   
Sbjct: 66  PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125

Query: 123 SGCCLSCYSILLLLLILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRW 182
           +GCCL  YSIL  LLIL++    A+I  D++W  ++P D TG    +   +E   +I +W
Sbjct: 126 NGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKW 185

Query: 183 VALGTIIFEALLFLLALVVRA----ANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGV 242
           V +  +  + L  LLA+V+RA        +D + DDE   PR +   PL+     P    
Sbjct: 186 VGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDE--NPRSRTWDPLL----GPQGNQ 245

Query: 243 PVAGTLDQRPSRNDAWSTRMREKYGLDTS 251
             AG+     S+ + WS+R+REKYGL+ S
Sbjct: 246 APAGS-----SKIENWSSRIREKYGLNQS 263

[Close]

BLAST of CsaV3_1G017000 vs. ExPASy Swiss-Prot
Match: Q9SVU4 (Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.5e-27
Identity = 85/286 (29.72%), Postives = 138/286 (48.25%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDV------------PGPSLSG 62
           C   F  +LK+LNF  + +G++++ Y I++L +Y   H  V            P  S S 
Sbjct: 6   CHVSFASILKILNFLQAFIGISIIIYSIWMLDQY-NHHVPVDPPPSQPPAASSPDSSYSF 65

Query: 63  DHDLVQLGR---------PMLMAVSLSSSIFD--------NLPKAWFIYLFIATGVTIFV 122
            + ++++             +  + L S   D        +LP  WFIY F+A G+ + +
Sbjct: 66  SNSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCI 125

Query: 123 VSCFGCIGAATRSGCCLSCYSILLLLLILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIY 182
           V+  G I A   +GCCL  YSIL  LLI+++     FI  D++W  ++P D TG  + + 
Sbjct: 126 VTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLR 185

Query: 183 ELLESKWEIIRWVALGTIIFEALLFLLALVVRA--ANRPVDYDSDDEYIAPRQQIRQPLI 242
             +E   +I +WV +  +  + L  LLALV+RA  + R  + D +D++  P  + R  L+
Sbjct: 186 AFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMSRARDNLL 245

Query: 243 NRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPS 258
                     P A       S  D W +R+REKYGL  S+ ++ PS
Sbjct: 246 G---------PQANQTSSGSSNIDNWRSRIREKYGLINSQ-SHTPS 280

[Close]

BLAST of CsaV3_1G017000 vs. ExPASy Swiss-Prot
Match: Q940P5 (Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.2e-23
Identity = 66/212 (31.13%), Postives = 112/212 (52.83%), Query Frame = 0


Query: 4   RGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRPMLM 63
           R C + +LKL+N  + ++G+AM+ Y ++L+ ++ +   ++  P    DH           
Sbjct: 6   RSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNL--PFADSDH----------- 65

Query: 64  AVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLLILV 123
                       P  WFIY F+  G  + VV+C G I A T +GCCL  Y   ++LL +V
Sbjct: 66  ------------PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMV 125

Query: 124 QLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLLALV 183
           + G  A IF +++W+ + P D +G F +  + +ES ++I +W+ L  +  + L  L+A++
Sbjct: 126 EGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAML 185

Query: 184 VRA--ANRPVDYDSDDEY----IAPRQQIRQP 210
           ++A   +    YDSDDEY    +A  Q  RQP
Sbjct: 186 LKALGPHPHRHYDSDDEYNVSTVALLQDARQP 192

[Close]

BLAST of CsaV3_1G017000 vs. ExPASy TrEMBL
Match: A0A0A0LHD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G904130 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.1e-156
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL
Sbjct: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL
Sbjct: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR
Sbjct: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. ExPASy TrEMBL
Match: A0A5A7T8L3 (Tobamovirus multiplication protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G00630 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.2e-150
Identity = 269/279 (96.42%), Postives = 274/279 (98.21%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVPGPSLSGDHDLVQLGRP
Sbjct: 90  MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPGPSLSGDHDLVQLGRP 149

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLPKAWFIYLFIATGV +FVVSCFGCIGAATRSGCCLSCYSILLLLL
Sbjct: 150 MLMAVSLSSNIFDNLPKAWFIYLFIATGVIVFVVSCFGCIGAATRSGCCLSCYSILLLLL 209

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDKNWRDEIPGD+TGNFDKIYELLE+KW+IIRWVALGTIIFEALLFLL
Sbjct: 210 ILVQLGCAAFIFFDKNWRDEIPGDKTGNFDKIYELLENKWKIIRWVALGTIIFEALLFLL 269

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWS R
Sbjct: 270 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSAR 329

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQ AEEKSRCTIM
Sbjct: 330 MREKYGLDTSEFTYNPSESHRFQQVAPQAAEEKSRCTIM 368

[Close]

BLAST of CsaV3_1G017000 vs. ExPASy TrEMBL
Match: A0A5D3E4T8 (Tobamovirus multiplication protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004130 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.2e-150
Identity = 269/279 (96.42%), Postives = 274/279 (98.21%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVPGPSLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPGPSLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLPKAWFIYLFIATGV +FVVSCFGCIGAATRSGCCLSCYSILLLLL
Sbjct: 61  MLMAVSLSSNIFDNLPKAWFIYLFIATGVIVFVVSCFGCIGAATRSGCCLSCYSILLLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDKNWRDEIPGD+TGNFDKIYELLE+KW+IIRWVALGTIIFEALLFLL
Sbjct: 121 ILVQLGCAAFIFFDKNWRDEIPGDKTGNFDKIYELLENKWKIIRWVALGTIIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWS R
Sbjct: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSAR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQ AEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQAAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. ExPASy TrEMBL
Match: A0A1S3CQ26 (tobamovirus multiplication protein 2A OS=Cucumis melo OX=3656 GN=LOC103503508 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.2e-150
Identity = 269/279 (96.42%), Postives = 274/279 (98.21%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVPGPSLSGDHDLVQLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPGPSLSGDHDLVQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLPKAWFIYLFIATGV +FVVSCFGCIGAATRSGCCLSCYSILLLLL
Sbjct: 61  MLMAVSLSSNIFDNLPKAWFIYLFIATGVIVFVVSCFGCIGAATRSGCCLSCYSILLLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDKNWRDEIPGD+TGNFDKIYELLE+KW+IIRWVALGTIIFEALLFLL
Sbjct: 121 ILVQLGCAAFIFFDKNWRDEIPGDKTGNFDKIYELLENKWKIIRWVALGTIIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWS R
Sbjct: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSAR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQ AEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQAAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. ExPASy TrEMBL
Match: A0A6J1EYE4 (tobamovirus multiplication protein 2A-like OS=Cucurbita moschata OX=3662 GN=LOC111437351 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.7e-147
Identity = 260/279 (93.19%), Postives = 271/279 (97.13%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSLSGDHDLVQLGRP 60
           MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQS SDVP P LSGDHD++QLGRP
Sbjct: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSSSDVPRPPLSGDHDVIQLGRP 60

Query: 61  MLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLLL 120
           MLMAVSLSS+IFDNLP+AWFIYLFIA GV IFVVSCFGCIGAATR+GCCLSCYS+L+LLL
Sbjct: 61  MLMAVSLSSNIFDNLPRAWFIYLFIAVGVIIFVVSCFGCIGAATRNGCCLSCYSVLVLLL 120

Query: 121 ILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFLL 180
           ILVQLGC AFIFFDK+WRDEIPGD+TGNFDKIYELLE KWEIIRWVALG +IFEALLFLL
Sbjct: 121 ILVQLGCAAFIFFDKHWRDEIPGDKTGNFDKIYELLEDKWEIIRWVALGAVIFEALLFLL 180

Query: 181 ALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240
           ALVVRAANRP+DYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR
Sbjct: 181 ALVVRAANRPLDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWSTR 240

Query: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM
Sbjct: 241 MREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 279

[Close]

BLAST of CsaV3_1G017000 vs. TAIR 10
Match: AT1G32400.1 (tobamovirus multiplication 2A )

HSP 1 Score: 419.1 bits (1076), Expect = 2.8e-117
Identity = 203/280 (72.50%), Postives = 230/280 (82.14%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SHSDVPGPSLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL VEY + + + V     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLL 120
           P+LMAVSLSS+IFDNLPKAWFIYLFI  GV +FV+SC GC+G  +RS CCLSCYS+LL+L
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLIL 120

Query: 121 LILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFL 180
           LILV+LG  AFIFFD +WRDE+P DRTGNFD IY  L   W+I+RWVALG ++FEALLFL
Sbjct: 121 LILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFL 180

Query: 181 LALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWST 240
           LAL+VRAAN P +YDSDDEY+APRQQIRQP INR  AP TGVPVA TLDQRPSR+D WS 
Sbjct: 181 LALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSA 240

Query: 241 RMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           RMREKYGLDTSEFTYNPSESHRFQQ+  QP EEK RCTIM
Sbjct: 241 RMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of CsaV3_1G017000 vs. TAIR 10
Match: AT1G32400.2 (tobamovirus multiplication 2A )

HSP 1 Score: 419.1 bits (1076), Expect = 2.8e-117
Identity = 203/280 (72.50%), Postives = 230/280 (82.14%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SHSDVPGPSLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL VEY + + + V     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLL 120
           P+LMAVSLSS+IFDNLPKAWFIYLFI  GV +FV+SC GC+G  +RS CCLSCYS+LL+L
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLIL 120

Query: 121 LILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFL 180
           LILV+LG  AFIFFD +WRDE+P DRTGNFD IY  L   W+I+RWVALG ++FEALLFL
Sbjct: 121 LILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFL 180

Query: 181 LALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWST 240
           LAL+VRAAN P +YDSDDEY+APRQQIRQP INR  AP TGVPVA TLDQRPSR+D WS 
Sbjct: 181 LALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSA 240

Query: 241 RMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           RMREKYGLDTSEFTYNPSESHRFQQ+  QP EEK RCTIM
Sbjct: 241 RMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of CsaV3_1G017000 vs. TAIR 10
Match: AT1G32400.3 (tobamovirus multiplication 2A )

HSP 1 Score: 419.1 bits (1076), Expect = 2.8e-117
Identity = 203/280 (72.50%), Postives = 230/280 (82.14%), Query Frame = 0


Query: 1   MACRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQ-SHSDVPGPSLSGDHDLVQLGR 60
           MACRGC ECLLKLLNF L++ GL M+GYGIYL VEY + + + V     +GD   V  GR
Sbjct: 1   MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVTDNSVTFDLTNGDQSYVSFGR 60

Query: 61  PMLMAVSLSSSIFDNLPKAWFIYLFIATGVTIFVVSCFGCIGAATRSGCCLSCYSILLLL 120
           P+LMAVSLSS+IFDNLPKAWFIYLFI  GV +FV+SC GC+G  +RS CCLSCYS+LL+L
Sbjct: 61  PILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLIL 120

Query: 121 LILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRWVALGTIIFEALLFL 180
           LILV+LG  AFIFFD +WRDE+P DRTGNFD IY  L   W+I+RWVALG ++FEALLFL
Sbjct: 121 LILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFL 180

Query: 181 LALVVRAANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGVPVAGTLDQRPSRNDAWST 240
           LAL+VRAAN P +YDSDDEY+APRQQIRQP INR  AP TGVPVA TLDQRPSR+D WS 
Sbjct: 181 LALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWSA 240

Query: 241 RMREKYGLDTSEFTYNPSESHRFQQVAPQPAEEKSRCTIM 280
           RMREKYGLDTSEFTYNPSESHRFQQ+  QP EEK RCTIM
Sbjct: 241 RMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM 280

[Close]

BLAST of CsaV3_1G017000 vs. TAIR 10
Match: AT2G20230.1 (Tetraspanin family protein )

HSP 1 Score: 126.3 bits (316), Expect = 3.8e-29
Identity = 87/269 (32.34%), Postives = 134/269 (49.81%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDVPGPSL---SGDHDLVQLGR 62
           C   F   LK+LNF  + +G++++ Y I++L EY +     P PS    SG      +  
Sbjct: 6   CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65

Query: 63  PMLMAVSLSSSIF--------------DNLPKAWFIYLFIATGVTIFVVSCFGCIGAATR 122
           P+   +   +SI                +LP  WFIY F+A G+ + +V+  G I A   
Sbjct: 66  PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125

Query: 123 SGCCLSCYSILLLLLILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIYELLESKWEIIRW 182
           +GCCL  YSIL  LLIL++    A+I  D++W  ++P D TG    +   +E   +I +W
Sbjct: 126 NGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKW 185

Query: 183 VALGTIIFEALLFLLALVVRA----ANRPVDYDSDDEYIAPRQQIRQPLINRPVAPATGV 242
           V +  +  + L  LLA+V+RA        +D + DDE   PR +   PL+     P    
Sbjct: 186 VGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEEDDE--NPRSRTWDPLL----GPQGNQ 245

Query: 243 PVAGTLDQRPSRNDAWSTRMREKYGLDTS 251
             AG+     S+ + WS+R+REKYGL+ S
Sbjct: 246 APAGS-----SKIENWSSRIREKYGLNQS 263

[Close]

BLAST of CsaV3_1G017000 vs. TAIR 10
Match: AT4G28770.1 (Tetraspanin family protein )

HSP 1 Score: 123.2 bits (308), Expect = 3.2e-28
Identity = 85/286 (29.72%), Postives = 138/286 (48.25%), Query Frame = 0


Query: 3   CRGCFECLLKLLNFFLSLLGLAMVGYGIYLLVEYLQSHSDV------------PGPSLSG 62
           C   F  +LK+LNF  + +G++++ Y I++L +Y   H  V            P  S S 
Sbjct: 6   CHVSFASILKILNFLQAFIGISIIIYSIWMLDQY-NHHVPVDPPPSQPPAASSPDSSYSF 65

Query: 63  DHDLVQLGR---------PMLMAVSLSSSIFD--------NLPKAWFIYLFIATGVTIFV 122
            + ++++             +  + L S   D        +LP  WFIY F+A G+ + +
Sbjct: 66  SNSIIEINSVSDSLKNPIDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCI 125

Query: 123 VSCFGCIGAATRSGCCLSCYSILLLLLILVQLGCGAFIFFDKNWRDEIPGDRTGNFDKIY 182
           V+  G I A   +GCCL  YSIL  LLI+++     FI  D++W  ++P D TG  + + 
Sbjct: 126 VTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVIDRHWEKDLPYDPTGELNSLR 185

Query: 183 ELLESKWEIIRWVALGTIIFEALLFLLALVVRA--ANRPVDYDSDDEYIAPRQQIRQPLI 242
             +E   +I +WV +  +  + L  LLALV+RA  + R  + D +D++  P  + R  L+
Sbjct: 186 AFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQSELDDEDDFENPMSRARDNLL 245

Query: 243 NRPVAPATGVPVAGTLDQRPSRNDAWSTRMREKYGLDTSEFTYNPS 258
                     P A       S  D W +R+REKYGL  S+ ++ PS
Sbjct: 246 G---------PQANQTSSGSSNIDNWRSRIREKYGLINSQ-SHTPS 280

The following BLAST results are available for this feature:

BLAST of CsaV3_1G017000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148498.1	6.5e-156	100.00	tobamovirus multiplication protein 2A [Cucumis sativus] >XP_031735959.1 tobamovi...	[more]
XP_008465936.1	2.4e-150	96.42	PREDICTED: tobamovirus multiplication protein 2A [Cucumis melo] >TYK31133.1 toba...	[more]
KAA0038536.1	2.4e-150	96.42	tobamovirus multiplication protein 2A [Cucumis melo var. makuwa]	[more]
XP_038877822.1	3.4e-149	94.98	tobamovirus multiplication protein 2A [Benincasa hispida]	[more]
XP_023533384.1	2.5e-147	93.55	tobamovirus multiplication protein 2A-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_1G017000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5W7	4.0e-116	72.50	Tobamovirus multiplication protein 2A OS=Arabidopsis thaliana OX=3702 GN=TOM2A P...	[more]
Q93XY5	5.3e-28	32.34	Tetraspanin-18 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH2 PE=1 SV=1	[more]
Q9SVU4	4.5e-27	29.72	Tetraspanin-20 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH1 PE=1 SV=1	[more]
Q940P5	5.2e-23	31.13	Tetraspanin-19 OS=Arabidopsis thaliana OX=3702 GN=TOM2AH3 PE=2 SV=1	[more]

BLAST of CsaV3_1G017000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHD4	3.1e-156	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G904130 PE=4 SV=1	[more]
A0A5A7T8L3	1.2e-150	96.42	Tobamovirus multiplication protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3E4T8	1.2e-150	96.42	Tobamovirus multiplication protein 2A OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CQ26	1.2e-150	96.42	tobamovirus multiplication protein 2A OS=Cucumis melo OX=3656 GN=LOC103503508 PE...	[more]
A0A6J1EYE4	2.7e-147	93.19	tobamovirus multiplication protein 2A-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of CsaV3_1G017000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32400.1	2.8e-117	72.50	tobamovirus multiplication 2A	[more]
AT1G32400.2	2.8e-117	72.50	tobamovirus multiplication 2A	[more]
AT1G32400.3	2.8e-117	72.50	tobamovirus multiplication 2A	[more]
AT2G20230.1	3.8e-29	32.34	Tetraspanin family protein	[more]
AT4G28770.1	3.2e-28	29.72	Tetraspanin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspanin	coord: 9..137 e-value: 1.3E-15 score: 57.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..279
None	No IPR available	PANTHER	PTHR19282	TETRASPANIN	coord: 2..252
None	No IPR available	PANTHER	PTHR19282:SF417	TOBAMOVIRUS MULTIPLICATION PROTEIN 2A	coord: 2..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G017000.1	CsaV3_1G017000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane