CsaV3_1G016960 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAAATCTGTTCGATTTTTCGGATTCTTCCTCTGTGTCCTAGCAACTTCATCGTCGTTTCACTCGGCTTTCGCTGTTAGAAAAATTGCGGAGGCGGTTTACTCATCCGATTGTTGGGACGCGATAAACGCGGTGAAAGGATGTCAGAATGAAATCGACACGCCATGAAGAGTAATGAGATCGAAGGTGAGTTACGATTGTTGTAAAGTGATTTTACATGGAATGCCGGAGAAATGCGCCGCCGTGGTTTTTTCGTCTGGTGGAGAGTTTTCCCCGGATGTTAGCGGTGCGGTTAACGAATATTGCGACGGAATGGGAATTACTCCGCCGGTGCTTGAAACGGAGGATACTAAAGTGGAAGAAAATTGA AGAGTAATGAGATCGAAGGTGAGTTACGATTGTTGTAAAGTGATTTTACATGGAATGCCGGAGAAATGCGCCGCCGTGGTTTTTTCGTCTGGTGGAGAGTTTTCCCCGGATGTTAGCGGTGCGGTTAACGAATATTGCGACGGAATGGGAATTACTCCGCCGGTGCTTGAAACGGAGGATACTAAAGTGGAAGAAAATTGA AGAGTAATGAGATCGAAGGTGAGTTACGATTGTTGTAAAGTGATTTTACATGGAATGCCGGAGAAATGCGCCGCCGTGGTTTTTTCGTCTGGTGGAGAGTTTTCCCCGGATGTTAGCGGTGCGGTTAACGAATATTGCGACGGAATGGGAATTACTCCGCCGGTGCTTGAAACGGAGGATACTAAAGTGGAAGAAAATTGA RVMRSKVSYDCCKVILHGMPEKCAAVVFSSGGEFSPDVSGAVNEYCDGMGITPPVLETEDTKVEEN* Homology
BLAST of CsaV3_1G016960 vs. NCBI nr
Match: KAE8652857.1 (hypothetical protein Csa_023774, partial [Cucumis sativus]) HSP 1 Score: 141.4 bits (355), Expect = 2.9e-30 Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
BLAST of CsaV3_1G016960 vs. NCBI nr
Match: KAA0038539.1 (hypothetical protein E6C27_scaffold92G00660 [Cucumis melo var. makuwa] >TYK31136.1 hypothetical protein E5676_scaffold455G004160 [Cucumis melo var. makuwa]) HSP 1 Score: 127.9 bits (320), Expect = 3.3e-26 Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of CsaV3_1G016960 vs. NCBI nr
Match: XP_022931003.1 (uncharacterized protein LOC111437329 [Cucurbita moschata] >KAG6606231.1 hypothetical protein SDJN03_03548, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100.5 bits (249), Expect = 5.7e-18 Identity = 43/55 (78.18%), Postives = 51/55 (92.73%), Query Frame = 0
BLAST of CsaV3_1G016960 vs. NCBI nr
Match: KAG6571831.1 (hypothetical protein SDJN03_28559, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 96.7 bits (239), Expect = 8.3e-17 Identity = 42/51 (82.35%), Postives = 48/51 (94.12%), Query Frame = 0
BLAST of CsaV3_1G016960 vs. ExPASy TrEMBL
Match: A0A0A0LEG0 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G904090 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 2.5e-27 Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of CsaV3_1G016960 vs. ExPASy TrEMBL
Match: A0A5A7TB28 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004160 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26 Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of CsaV3_1G016960 vs. ExPASy TrEMBL
Match: A0A6J1EX44 (uncharacterized protein LOC111437329 OS=Cucurbita moschata OX=3662 GN=LOC111437329 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 2.8e-18 Identity = 43/55 (78.18%), Postives = 51/55 (92.73%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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