CsaV3_1G015430 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAAGCTTTATTCCTCTTGGATCCTCACCATTGTTCTTATCATTGCAGGTTCTCTTCTACTTCTGAATTATGTATAACTATTGCCAGCATCCATATGATCCATATGATGTACATTTTTTAAATGAAAAATACCATATTTATAGTGGCTAAGTATATTTCACCTACATTGTGGTGCTTGTGGTGCAGTTGCAATGATTTCAATACCTCAAGGAGCCTTAGCTGCTCGATGTCAAGACATATTGTATAATAGTGGATGCACACTTGCTGATTGTGGGCAAAAATGTTGGGAGAAGCACCATGAGGCCTCACGTCAATGCATACCAACTGATCCTGACCAAACTATCTATGCTTGTTATTGTTTCTATACTTGTGGTTAAAATTTGATTTTGAGATGTTTCTCGTTTAGTCTATGCATTGGACATAGACTAAGTAACAATTTGTAATAAAATTGGGTTTACAGCTCCAAAGGTGATGACTTATTGAATTTTTAAAAGAGAAATTGCATCATAAGGCAAAAACATTTTTTAAAAAATAGCCCATGTCATATCTTTTTTTGCATATTGCGAATATGACAAATATGACAAGTAATTAGTGATATCACACGGCTATCAGATGACTATAAGTATACTCACGTACTTTG ATGACAAAGCTTTATTCCTCTTGGATCCTCACCATTGTTCTTATCATTGCAGTTGCAATGATTTCAATACCTCAAGGAGCCTTAGCTGCTCGATGTCAAGACATATTGTATAATAGTGGATGCACACTTGCTGATTGTGGGCAAAAATGTTGGGAGAAGCACCATGAGGCCTCACGTCAATGCATACCAACTGATCCTGACCAAACTATCTATGCTTGTTATTGTTTCTATACTTGTGGTTAA ATGACAAAGCTTTATTCCTCTTGGATCCTCACCATTGTTCTTATCATTGCAGTTGCAATGATTTCAATACCTCAAGGAGCCTTAGCTGCTCGATGTCAAGACATATTGTATAATAGTGGATGCACACTTGCTGATTGTGGGCAAAAATGTTGGGAGAAGCACCATGAGGCCTCACGTCAATGCATACCAACTGATCCTGACCAAACTATCTATGCTTGTTATTGTTTCTATACTTGTGGTTAA MTKLYSSWILTIVLIIAVAMISIPQGALAARCQDILYNSGCTLADCGQKCWEKHHEASRQCIPTDPDQTIYACYCFYTCG* Homology
BLAST of CsaV3_1G015430 vs. NCBI nr
Match: KGN64987.1 (hypothetical protein Csa_022748 [Cucumis sativus]) HSP 1 Score: 172.9 bits (437), Expect = 1.1e-39 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of CsaV3_1G015430 vs. NCBI nr
Match: KAA0042348.1 (S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa] >TYK15471.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]) HSP 1 Score: 147.1 bits (370), Expect = 6.4e-32 Identity = 68/81 (83.95%), Postives = 72/81 (88.89%), Query Frame = 0
BLAST of CsaV3_1G015430 vs. NCBI nr
Match: KAE8649772.1 (hypothetical protein Csa_012405, partial [Cucumis sativus]) HSP 1 Score: 102.1 bits (253), Expect = 2.4e-18 Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 0
BLAST of CsaV3_1G015430 vs. NCBI nr
Match: BBH07492.1 (hypothetical protein Prudu_019451 [Prunus dulcis]) HSP 1 Score: 77.0 bits (188), Expect = 8.2e-11 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0
BLAST of CsaV3_1G015430 vs. NCBI nr
Match: CAB4286917.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 75.5 bits (184), Expect = 2.4e-10 Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of CsaV3_1G015430 vs. ExPASy TrEMBL
Match: A0A0A0LVZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172580 PE=3 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 5.3e-40 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of CsaV3_1G015430 vs. ExPASy TrEMBL
Match: A0A5A7THQ7 (S locus-related glycoprotein 1 binding pollen coat OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00450 PE=3 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 3.1e-32 Identity = 68/81 (83.95%), Postives = 72/81 (88.89%), Query Frame = 0
BLAST of CsaV3_1G015430 vs. ExPASy TrEMBL
Match: A0A0A0L2R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G576870 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.2e-20 Identity = 49/76 (64.47%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of CsaV3_1G015430 vs. ExPASy TrEMBL
Match: A0A0A0KYP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507400 PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14 Identity = 41/79 (51.90%), Postives = 51/79 (64.56%), Query Frame = 0
BLAST of CsaV3_1G015430 vs. ExPASy TrEMBL
Match: A0A4Y1RT05 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_019451 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 4.0e-11 Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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