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CsaV3_1G015420 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCATACCAGATGGCTTACATGATCCCAAATGGCATAACACCTTTCAAGCTCATATTCGATAAGTCGTGCCAATTCCTAGTTGAGATAGGACATAAAGCTTATTGGGCGGTCATGCAATGCAACCCAACTCTCGCACAAGCCAACAGAGACAAGGTTTCTTGA GCATACCAGATGGCTTACATGATCCCAAATGGCATAACACCTTTCAAGCTCATATTCGATAAGTCGTGCCAATTCCTAGTTGAGATAGGACATAAAGCTTATTGGGCGGTCATGCAATGCAACCCAACTCTCGCACAAGCCAACAGAGACAAGGTTTCTTGA GCATACCAGATGGCTTACATGATCCCAAATGGCATAACACCTTTCAAGCTCATATTCGATAAGTCGTGCCAATTCCTAGTTGAGATAGGACATAAAGCTTATTGGGCGGTCATGCAATGCAACCCAACTCTCGCACAAGCCAACAGAGACAAGGTTTCTTGA AYQMAYMIPNGITPFKLIFDKSCQFLVEIGHKAYWAVMQCNPTLAQANRDKVS* Homology
BLAST of CsaV3_1G015420 vs. NCBI nr
Match: KAE8652829.1 (hypothetical protein Csa_022892, partial [Cucumis sativus]) HSP 1 Score: 117.9 bits (294), Expect = 2.8e-23 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. NCBI nr
Match: XP_038889236.1 (uncharacterized protein LOC120079127 [Benincasa hispida]) HSP 1 Score: 69.7 bits (169), Expect = 8.7e-09 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. NCBI nr
Match: XP_016185592.1 (uncharacterized protein LOC107627254 [Arachis ipaensis] >XP_025635951.1 uncharacterized protein LOC112730053 [Arachis hypogaea]) HSP 1 Score: 69.3 bits (168), Expect = 1.1e-08 Identity = 26/51 (50.98%), Postives = 39/51 (76.47%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. NCBI nr
Match: XP_025661708.1 (uncharacterized protein LOC112757331 [Arachis hypogaea]) HSP 1 Score: 68.6 bits (166), Expect = 1.9e-08 Identity = 26/51 (50.98%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. NCBI nr
Match: XP_038885818.1 (uncharacterized protein LOC120076112 [Benincasa hispida]) HSP 1 Score: 67.4 bits (163), Expect = 4.3e-08 Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. ExPASy TrEMBL
Match: A0A6P5MQJ7 (uncharacterized protein LOC110275689 OS=Arachis duranensis OX=130453 GN=LOC110275689 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.1e-08 Identity = 25/47 (53.19%), Postives = 37/47 (78.72%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. ExPASy TrEMBL
Match: A0A6P4PJS8 (uncharacterized protein LOC108484766 OS=Gossypium arboreum OX=29729 GN=LOC108484766 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.7e-08 Identity = 26/51 (50.98%), Postives = 37/51 (72.55%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. ExPASy TrEMBL
Match: A0A6P4MZT5 (uncharacterized protein LOC108472328 OS=Gossypium arboreum OX=29729 GN=LOC108472328 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.7e-08 Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. ExPASy TrEMBL
Match: A0A1U8J171 (uncharacterized protein LOC107902419 OS=Gossypium hirsutum OX=3635 GN=LOC107902419 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.1e-08 Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
BLAST of CsaV3_1G015420 vs. ExPASy TrEMBL
Match: A0A445A149 (Reverse transcriptase OS=Arachis hypogaea OX=3818 GN=Ahy_B03g065235 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.1e-08 Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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