CsaV3_1G015330 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G015330
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein DOUBLE-STRAND BREAK FORMATION
Location	chr1: 10908495 .. 10913741 (-)
RNA-Seq Expression	CsaV3_1G015330
Synteny	CsaV3_1G015330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGTTGAGAATTACTTGGAAAATTAGGCATCATTATCATTTCATATATATATAAACTCAATACCAATTTCGGATTTAGAAGAACAAAGCTTTCCCACCAATTATTAATTGATGTTCTGTTCATACTCTCTCTTTCTTTCGCGCCTCAGAAGCCGAAGGTTTGGTTTGGCTATTCACTCTCAACTCTTATCAAACTCATTTGATCCAATTTTCCATCCTTAATCTCCATTTATTATCACTTCTTACATTCTCTCTGATTCTTTACCGCTCAAGACTTCCACAGATTTGATGATTCTACTTTGCGAATTCTGGAATCATTTCCCGCTTCCAAAGACGCGACGTCGTTGATGGATGTTAATTCCAGCTTTAAAGAAGTTCTCAGATTTGAATCTCTATCTATCATTCGTGAAACCTCTGAGAAAACTGATGATCATAAGCTTCTAGTCATCGAATTTCTTGTTCGAGCTTTTGCCCTTGTTGGAGACATTGAGGTGATTATTTATTTACATAACTCTCTCTGATCGTTTTTTGTATCTGTGACCCTTCAGTTTTTCTTCTGTAATCGTTTATGAATTTCCTAGTTTTGGTGTCTGTACTCTATGCTAAACGATGAATTTGTTAGCAGATGTGAATGTTTCTCTATTGTTCTACTTATACTTTCATGCTTCTAGAGTTGCTTAGCTTTGAGATACGAGGCCTTGAATTTTCGGGTACTGAAGTCTTTCAATCAACCATGGCTTCAAGTATCACACGCAGAATGGTTAAACTTCGCTGAGCATTCATTGCATGCTGGCTTTTTTTCAATTTCCATAAAGGTAAGGTGATTTCTTTTATTTATGTAATTGCTTAAGATTTTTCTTTAACACTTCGGTATAGGATTCTGTCCAATAAAAGTTCTACATATTATGTCCTTCCAACCACTTATGTATCTACTAATTATGAGGATGTGAGATATGAAGTGAAACCAAATGCTTAATAAAAATGCATTTATCTTTTTGGAAATTAAGAATGCATATGAAGTGGAGAAGTTGATGTTTGCAGTATGCTGGTGCTATGAATAGTAGTTCTATGAAAAGCCTCGTCTGAAGAATTCATTAACAAGGAAAAAATAACTCAGCATAAACAGTGGCTAAGTTTTGCTGGTGATATGCTTGTTGTGGCTAAGTTCATAAGGAAAAGCTTTGTCAGTGATGGTGCTATGCAAATTGTGGGTAGGTTTCAAGAAAGAGAAAAGATTCATATATGGCAAGTTATTAAGTAGAGAAAATGATGGGTAAGGAGAGCCTTTGTCAGAATGTCTGTGAGTTAGTTTTCACATGGTTTGAATTGAAGAATATGCTCATGAAGAACATTGAAGAACATGCATATTTAGTAAACGCGAACAGAAAGATTATAATGGCTTACCTAGACTCGATACACTAATGTGGTAAGATTTATGTTTGAATGAGCACTACTGGGACATAATTAGAACAAGAACAATGCCATTGCTGCCAATAATCTTTCTACCATCCGCACAACTAGCTCAGTTTACATCGATGCATGGTAGGAGAGACAGTGATTGGGCTACGAAGACAATAAGGTAAGGGGAACATTGAAACAGCGGGGAAATTTGTTGTAGGAGCATTGAGGAATCTATGAATTGGTAACAGAAAACTGAGGTTTGGTAGAGTAAGAGTCTAACGCAAGACCCTAGAAATGAGCATGTCTTGTTAGATCACTACTGAACCAAAAAACTTAAGTTTATGGATTATGGAAAATGTAATTATATCAATACTTTAATACTTCCCCTTGTTTGTGGGTGTAGAAATTTGTAGACAACTGGGCAAGGGGAAATCAATATTAATTGAAGTGAAAATGACGTTGTATGGTTTGGAACTTTGAACATAGGACCTCCTGCCTTTTTACTATGTGTTAGATTATTATTCACTCCAGGCCTATCAACTTTTAGTTCTGGAGATTATTATTCTTTTTTATCTCGTGTCTTATTCTCTTATTGCAGCTCTAATTTATAGTACTCAGTTACTTTTCTCCTTCAATACAATGAAATTATGGTGAAGATTTAATTAGTCTCAATACGTATGACTTATTTACAGTTTTCTTTGGTAGGCATATGAGCAAGCGCTGTCAAGCCTTCAGCAGAGTGATACTGCAAACTACACATCACATGGTTCCTTTAAACGCACAGAAGTTATGGAGAAGATAAATAGACTCAAAGATCATGCTCTGAATTTAGCTGGTTCCCATTCTGGTAGGAATCTTAGTCGAGTTAAAAGATTTGATGATCAATTCAATCACTAGATTAGCTGTATGCTTTGGGTTCTAATTTGTTTAAGAACTAACTGTTTCACTTTATATTGAAGGCATTGCATCTGTTGATGATTGACTTTCATGGATAAGATTTTTTACTTCAAACTTCGTGCTTTTTGAATCCCTTGTTGTATCTTAACCAAACATCCAGTGCTTCCATCATAATATTATTTTCAAACGACTTGTTATTCATAAGGAGAAAAAAGAAAATAACCAAATACCTTCTATTTCTATTACATAATTTTAATAACTAATAATTTGGAATGTAGACAATCTTTTAGTCCAAATACCATCTGACTCCTTGATCATTGTGTCTTATTAAATCAGTTCAAGCTCTCACATCTGATTATTTGAAAAAGAAAGTAACTGAAAGGAACAGAAAGATTTCTTCATCCTGCACAAGAAAATTTACAGCGAGCACTCTATTCATAAATGGTATCAGAAACTACAATGCAAGAAAGCTGCATGAATATCGAAGTTTTGAAGGGGTTAACCAGGGTCGCACAAGATCCAGTTTTGTGATCAGACCTACATGTAGTCTCTCTTCATATCCATCTGACTAGATAAATGTTCAGGTTAGTTTTACACGCATGGGTGCATGAGTAACTTTTCCTCTTATCAGTGTAGTATTTCTTTAAACTTTTATATTCATTATATAATTTTATAATAATAGTAACTAGCGGATTTGAACTTTGATGGCATAGAACCGTAATTCACTTAACTTGCGCTTTAGGAGTAGGGTTAAAGTTGATGCTATGCATTTGTTCTTTAATCAATGCCAAGAGGGGGCTAGACTTTATTACTCGAGTGATGTAAATGATTGGTGAGACTGAGTTAAGTAGGAAAGGGCTGAGTAGTTTGGCGAGAGAATGAGTCTAAATGATATTTCTTCTCTCAATAGGTCGAGATAACTATATCTAAGAGGCTCTATTGAACTCCCCATGACTGTTTTTTCCCACATTTTTTTTGTAAGAGAAGTTACAAGCTATTGCGTTAAATTTTTGCAGCTGCTGCATGAATAGATTAAGTGTATGTTTGGATTGACTTTCAAAGAATTGAAAAAAGTGTTTATAAGTGCAGAAAAAGTGTTTGTAAACACTTAAATATCAATCCAAATGCACCATAAGGCATTATTCAAAAACCCATTATTGGTTCCCCATGCTCAAAGTATAGTTGCGGTCGCTAACTCTTCCACCCTGAATTTAACCTTTTATATCATAGACTGGTTAATGCTATGCAGCTTAGAAGTATGGACAATTTTGTTTGACTAGTGTGCCATGTTCGGATGATGTGTGTGCATCTGCAGGTAGATTGTAAAAGCAAAAGTACTTTTGGTATCAAATTGTGATTACCTAACGATTTCTCTTGTGCTAGATAAGTTTTTCATTTTATTTTCTTTATAAATTTGACTGGGATTGAGTCGATGTGGTTCATTGAAGCTTTTAATGTTTATTTTCTTCCTGTTATTTGACGCTTCTGAATTTGTGTGCTTCCTTTAGGCAATAGGTTAGTACTGGACAGTTTATCAAGAAGACCAACTTAACTCTGACTGCTGCAAACTTATTCTTTCTATTACAGGGAGTCGATCAGGGTGACTCGGGCGGCAAAAGAAAAAGTGTTTCTATATAATTCCAGTTGATCTCAGTTCTGTGCAAGTCCAAGTTGCTTCTCCCCGTCTGACAGGTTTGTATTATCAATACCCCACCCCACCCCAAATTCTTCATTTCTTCCTTTTTGTAAGAGTTCAATTTTTCAATACCACAAAATCTTTCATGTGGTAAAATCCACTTGGAGTTCACATGGAAGCCTGTAAATTCTTTCTCATTCCCTCTTTGAGACAAGAGAATGACGTGCTTATTTCATTTCCTTTTCATGCCATTAGTTGTTTGGAAACATTTCAGTGTTTTTTGTTTTGTTTTACTTCACCTCTCTGTGTAGACGTTGAACGTGAAACTTTGGTCCAATCAGAAATTGCCATATTATTTACTAAATTAGTGACAAAATTTTAAATAATTGAATTTGAGATTAATTAAATGTTCATATGTGTCTCCGATTCAAATCCAGACGTTCAAAGGAGATCACCAAAAGAACATGGAGACGGTTCTGGCAGAGCATTTTGAGCGAACCCACTACCATCAACCACCATCCTAGCAACTTCATTTCACCGAGATCTACAGAAATTCTTCTCTCGATCTCACAAATAAAAATAATAATGATGAAGGACATAATATCATAAAAGTATAGAAAGAAAATCGTGTCAATTTGAAGGTTTCCCCGGCCAACCAAGAAATGAACTTCAATTTCCAACAAATCGATCCCAATTGGAACAAGAAACTCTCAGATTTGCTCATTATCTCCACGATTCACATTAAAAAGAAAAAAAAGAGAAGAAACACAATCAATATATATACCTTCTTGAACCAAGTGCATCCCACGACCAAGAAATTTTGGAAGTTATATAAGAGCAAGTGAAACTCATATAACTGCCTTGCCTCTCTTGTGGCATTGTAGTCAAATTTCAACATTTTGCACGTCCATATTGCCTTATGCTCCAACTCTAATGGTAAATGACTGACTTTTCTGAAGACCAACGCACTGGAAGACATACTAATAGGTGTCTTATACACAGTCCTATATGCCTATAACGCCAAATTCATGTGATCGGTCGAGAAGTGTTGACCATTTTCTCCAGAATTTTCTTTATTTCTGTAATGGAGACTTCTGCCTGACCATCAGTTTGACAATGTTAGACTATGGTGACCTTGTGGTTGACATTGTATTTTAACAGCAGTTTAGCGATGATGTGATTGATAAAATGGAAACCTTCATGGCTCATGAGAGCTTGTGAAGTCTCAAATTGTGTATATACGTTCCTCTTCAAAAATTTGCTCATAATTATCGCATCATTTTTCACGCAAGAGATGGCTTCAACCCATTT

mRNA sequence

ATGTTCTGTTCATACTCTCTCTTTCTTTCGCGCCTCAGAAGCCGAAGATTTGATGATTCTACTTTGCGAATTCTGGAATCATTTCCCGCTTCCAAAGACGCGACGTCGTTGATGGATGTTAATTCCAGCTTTAAAGAAGTTCTCAGATTTGAATCTCTATCTATCATTCGTGAAACCTCTGAGAAAACTGATGATCATAAGCTTCTAGTCATCGAATTTCTTGTTCGAGCTTTTGCCCTTGTTGGAGACATTGAGAGTTGCTTAGCTTTGAGATACGAGGCCTTGAATTTTCGGGTACTGAAGTCTTTCAATCAACCATGGCTTCAAGTATCACACGCAGAATGGTTAAACTTCGCTGAGCATTCATTGCATGCTGGCTTTTTTTCAATTTCCATAAAGGCATATGAGCAAGCGCTGTCAAGCCTTCAGCAGAGTGATACTGCAAACTACACATCACATGGTTCCTTTAAACGCACAGAAGTTATGGAGAAGATAAATAGACTCAAAGATCATGCTCTGAATTTAGCTGGTTCCCATTCTGTTCAAGCTCTCACATCTGATTATTTGAAAAAGAAAGTAACTGAAAGGAACAGAAAGATTTCTTCATCCTGCACAAGAAAATTTACAGCGAGCACTCTATTCATAAATGGTATCAGAAACTACAATGCAAGAAAGCTGCATGAATATCGAAGTTTTGAAGGGGTTAACCAGGGTCGCACAAGATCCAGTTTTGTGATCAGACCTACATGTAGTCTCTCTTCATATCCATCTGACTAG

Coding sequence (CDS)

ATGTTCTGTTCATACTCTCTCTTTCTTTCGCGCCTCAGAAGCCGAAGATTTGATGATTCTACTTTGCGAATTCTGGAATCATTTCCCGCTTCCAAAGACGCGACGTCGTTGATGGATGTTAATTCCAGCTTTAAAGAAGTTCTCAGATTTGAATCTCTATCTATCATTCGTGAAACCTCTGAGAAAACTGATGATCATAAGCTTCTAGTCATCGAATTTCTTGTTCGAGCTTTTGCCCTTGTTGGAGACATTGAGAGTTGCTTAGCTTTGAGATACGAGGCCTTGAATTTTCGGGTACTGAAGTCTTTCAATCAACCATGGCTTCAAGTATCACACGCAGAATGGTTAAACTTCGCTGAGCATTCATTGCATGCTGGCTTTTTTTCAATTTCCATAAAGGCATATGAGCAAGCGCTGTCAAGCCTTCAGCAGAGTGATACTGCAAACTACACATCACATGGTTCCTTTAAACGCACAGAAGTTATGGAGAAGATAAATAGACTCAAAGATCATGCTCTGAATTTAGCTGGTTCCCATTCTGTTCAAGCTCTCACATCTGATTATTTGAAAAAGAAAGTAACTGAAAGGAACAGAAAGATTTCTTCATCCTGCACAAGAAAATTTACAGCGAGCACTCTATTCATAAATGGTATCAGAAACTACAATGCAAGAAAGCTGCATGAATATCGAAGTTTTGAAGGGGTTAACCAGGGTCGCACAAGATCCAGTTTTGTGATCAGACCTACATGTAGTCTCTCTTCATATCCATCTGACTAG

Protein sequence

MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD*

Homology

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BLAST of CsaV3_1G015330 vs. NCBI nr
Match: XP_004139510.2 (protein DOUBLE-STRAND BREAK FORMATION isoform X1 [Cucumis sativus] >KGN64980.1 hypothetical protein Csa_022826 [Cucumis sativus])

HSP 1 Score: 501.1 bits (1289), Expect = 5.6e-138
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE
Sbjct: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS
Sbjct: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240
           VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT
Sbjct: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240

Query: 241 RSSFVIRPTCSLSSYPSD 259
           RSSFVIRPTCSLSSYPSD
Sbjct: 241 RSSFVIRPTCSLSSYPSD 258

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BLAST of CsaV3_1G015330 vs. NCBI nr
Match: XP_011654706.1 (protein DOUBLE-STRAND BREAK FORMATION isoform X2 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 2.5e-117
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 38  MDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNF 97
           MDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNF
Sbjct: 1   MDVNSSFKEVLRFESLSIIRETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNF 60

Query: 98  RVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFK 157
           RVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFK
Sbjct: 61  RVLKSFNQPWLQVSHAEWLNFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFK 120

Query: 158 RTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFING 217
           RTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFING
Sbjct: 121 RTEVMEKINRLKDHALNLAGSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFING 180

Query: 218 IRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD 259
           IRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD
Sbjct: 181 IRNYNARKLHEYRSFEGVNQGRTRSSFVIRPTCSLSSYPSD 221

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BLAST of CsaV3_1G015330 vs. NCBI nr
Match: XP_008464290.1 (PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_008464291.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_008464292.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_016903176.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_016903177.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_016903178.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_016903179.1 PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo])

HSP 1 Score: 429.1 bits (1102), Expect = 2.7e-116
Identity = 222/237 (93.67%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILE FPASKDATSL DV SSF E+LRFESLSIIRET+
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILELFPASKDATSLADVKSSFSELLRFESLSIIRETA 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDD KLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE
Sbjct: 61  EKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           HSLHAGFFSI+IKAYEQALSSLQQSDTANYTSHGSFK TEV+EKINRLKDHALNL+GSHS
Sbjct: 121 HSLHAGFFSIAIKAYEQALSSLQQSDTANYTSHGSFKHTEVIEKINRLKDHALNLSGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQ 238
           VQALTSDYLKKKVTER+RKISSSCTRKFTASTLF NGIRNYNARKLHEYRS  GVNQ
Sbjct: 181 VQALTSDYLKKKVTERSRKISSSCTRKFTASTLFRNGIRNYNARKLHEYRSIGGVNQ 237

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BLAST of CsaV3_1G015330 vs. NCBI nr
Match: XP_038895344.1 (protein DOUBLE-STRAND BREAK FORMATION isoform X1 [Benincasa hispida])

HSP 1 Score: 380.6 bits (976), Expect = 1.1e-101
Identity = 203/248 (81.85%), Postives = 214/248 (86.29%), Query Frame = 0


Query: 1   MFCS----YSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSII 60
           M CS    YSLF SRLRSRRFDDSTLRILE FPASKDA SLMDV S  KE LRFESLSII
Sbjct: 1   MSCSAAEQYSLFRSRLRSRRFDDSTLRILEFFPASKDAMSLMDVKSDLKEFLRFESLSII 60

Query: 61  RETSEKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWL 120
           RET+EKTDD KLLVIEFLVRAFALVGDIESCLALRYEALNFR+LKSFNQPWLQVSHAEWL
Sbjct: 61  RETAEKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRLLKSFNQPWLQVSHAEWL 120

Query: 121 NFAEHSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLA 180
           NFAEHSL AGFFSI+IKAYEQALSSLQQ+DT NYTSHGS KR EV+EKI RLKDHAL  A
Sbjct: 121 NFAEHSLRAGFFSIAIKAYEQALSSLQQNDTENYTSHGSLKRIEVIEKIKRLKDHALRSA 180

Query: 181 GSHSVQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVN 240
           GSHSVQALTS+YL KKVTERN KISSSCTRK TASTLF NG RN+NA+KLHEY+  EG+ 
Sbjct: 181 GSHSVQALTSEYLNKKVTERNIKISSSCTRKSTASTLFRNGFRNHNAKKLHEYQVLEGLT 240

Query: 241 QGRTRSSF 245
               +  F
Sbjct: 241 SESHKIQF 248

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BLAST of CsaV3_1G015330 vs. NCBI nr
Match: XP_022970621.1 (uncharacterized protein LOC111469552 isoform X2 [Cucurbita maxima])

HSP 1 Score: 380.6 bits (976), Expect = 1.1e-101
Identity = 201/235 (85.53%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 5   YSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTD 64
           YSLF SRLRSRRFDDSTLRILE F ASKD    MDV S  KE+LRFESLSIIRET EKTD
Sbjct: 9   YSLFCSRLRSRRFDDSTLRILEFFSASKDTMYFMDVKSGVKELLRFESLSIIRETVEKTD 68

Query: 65  DHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLH 124
           D KLLVIEFLVRAFALVGDIESCLALRYEALNFR LKSFNQP LQVSHAEWLNFAEHSL+
Sbjct: 69  DQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWLNFAEHSLN 128

Query: 125 AGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQAL 184
           AGFFSI+IKAYEQALSSLQQSDTANYTSHGS KR EV+EKI RLKDHAL  AGSHSVQAL
Sbjct: 129 AGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKRAEVIEKIKRLKDHALKSAGSHSVQAL 188

Query: 185 TSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGR 240
           TS+YLKKKVTERNRKISSSCTRKFTASTLF NGIRN+NA+KLHEY++ EG+   R
Sbjct: 189 TSEYLKKKVTERNRKISSSCTRKFTASTLFRNGIRNHNAKKLHEYQALEGLTSNR 243

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BLAST of CsaV3_1G015330 vs. ExPASy Swiss-Prot
Match: Q8RX33 (Protein DOUBLE-STRAND BREAK FORMATION OS=Arabidopsis thaliana OX=3702 GN=DFO PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 7.4e-32
Identity = 79/174 (45.40%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 7   LFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTDDH 66
           LF++R++ RRFD+ +LRILE    + +  S ++V S  ++ +R ES+ I  E + ++   
Sbjct: 38  LFINRVQDRRFDEESLRILELSLVAMNVKSFLEVRSRLRDFMRSESVVIFGELTGESMVA 97

Query: 67  KLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLHAG 126
           KL V+EF  RAFAL+GD+ESCLA+RYEALN R LKS +  WL VSH+EW  FA  S+  G
Sbjct: 98  KLSVLEFFARAFALLGDMESCLAMRYEALNLRQLKSPSCLWLGVSHSEWTKFAVQSMENG 157

Query: 127 FFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 181
           F SI+ KA E AL SL++       S  +    +  EK+ RL+D A +L  SHS
Sbjct: 158 FPSIAGKASENALLSLKKDSLIEPKSEDNSDILDAAEKVRRLRDSAASLTSSHS 211

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BLAST of CsaV3_1G015330 vs. ExPASy TrEMBL
Match: A0A0A0LSV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G171020 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 2.7e-138
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE
Sbjct: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS
Sbjct: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240
           VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT
Sbjct: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRT 240

Query: 241 RSSFVIRPTCSLSSYPSD 259
           RSSFVIRPTCSLSSYPSD
Sbjct: 241 RSSFVIRPTCSLSSYPSD 258

[Close]

BLAST of CsaV3_1G015330 vs. ExPASy TrEMBL
Match: A0A1S3CL48 (uncharacterized protein LOC103502216 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502216 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.3e-116
Identity = 222/237 (93.67%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MFCSYSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETS 60
           MFCSYSLFLSRLRSRRFDDSTLRILE FPASKDATSL DV SSF E+LRFESLSIIRET+
Sbjct: 1   MFCSYSLFLSRLRSRRFDDSTLRILELFPASKDATSLADVKSSFSELLRFESLSIIRETA 60

Query: 61  EKTDDHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120
           EKTDD KLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE
Sbjct: 61  EKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAE 120

Query: 121 HSLHAGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 180
           HSLHAGFFSI+IKAYEQALSSLQQSDTANYTSHGSFK TEV+EKINRLKDHALNL+GSHS
Sbjct: 121 HSLHAGFFSIAIKAYEQALSSLQQSDTANYTSHGSFKHTEVIEKINRLKDHALNLSGSHS 180

Query: 181 VQALTSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQ 238
           VQALTSDYLKKKVTER+RKISSSCTRKFTASTLF NGIRNYNARKLHEYRS  GVNQ
Sbjct: 181 VQALTSDYLKKKVTERSRKISSSCTRKFTASTLFRNGIRNYNARKLHEYRSIGGVNQ 237

[Close]

BLAST of CsaV3_1G015330 vs. ExPASy TrEMBL
Match: A0A6J1I136 (uncharacterized protein LOC111469552 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469552 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.4e-102
Identity = 201/235 (85.53%), Postives = 211/235 (89.79%), Query Frame = 0


Query: 5   YSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTD 64
           YSLF SRLRSRRFDDSTLRILE F ASKD    MDV S  KE+LRFESLSIIRET EKTD
Sbjct: 9   YSLFCSRLRSRRFDDSTLRILEFFSASKDTMYFMDVKSGVKELLRFESLSIIRETVEKTD 68

Query: 65  DHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLH 124
           D KLLVIEFLVRAFALVGDIESCLALRYEALNFR LKSFNQP LQVSHAEWLNFAEHSL+
Sbjct: 69  DQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWLNFAEHSLN 128

Query: 125 AGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQAL 184
           AGFFSI+IKAYEQALSSLQQSDTANYTSHGS KR EV+EKI RLKDHAL  AGSHSVQAL
Sbjct: 129 AGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKRAEVIEKIKRLKDHALKSAGSHSVQAL 188

Query: 185 TSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGR 240
           TS+YLKKKVTERNRKISSSCTRKFTASTLF NGIRN+NA+KLHEY++ EG+   R
Sbjct: 189 TSEYLKKKVTERNRKISSSCTRKFTASTLFRNGIRNHNAKKLHEYQALEGLTSNR 243

[Close]

BLAST of CsaV3_1G015330 vs. ExPASy TrEMBL
Match: A0A6J1I645 (uncharacterized protein LOC111469552 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469552 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.6e-101
Identity = 200/231 (86.58%), Postives = 210/231 (90.91%), Query Frame = 0


Query: 5   YSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTD 64
           YSLF SRLRSRRFDDSTLRILE F ASKD    MDV S  KE+LRFESLSIIRET EKTD
Sbjct: 9   YSLFCSRLRSRRFDDSTLRILEFFSASKDTMYFMDVKSGVKELLRFESLSIIRETVEKTD 68

Query: 65  DHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLH 124
           D KLLVIEFLVRAFALVGDIESCLALRYEALNFR LKSFNQP LQVSHAEWLNFAEHSL+
Sbjct: 69  DQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWLNFAEHSLN 128

Query: 125 AGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQAL 184
           AGFFSI+IKAYEQALSSLQQSDTANYTSHGS KR EV+EKI RLKDHAL  AGSHSVQAL
Sbjct: 129 AGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKRAEVIEKIKRLKDHALKSAGSHSVQAL 188

Query: 185 TSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGV 236
           TS+YLKKKVTERNRKISSSCTRKFTASTLF NGIRN+NA+KLHEY++ EG+
Sbjct: 189 TSEYLKKKVTERNRKISSSCTRKFTASTLFRNGIRNHNAKKLHEYQALEGL 239

[Close]

BLAST of CsaV3_1G015330 vs. ExPASy TrEMBL
Match: A0A6J1HMC3 (uncharacterized protein LOC111464906 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464906 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.0e-100
Identity = 199/241 (82.57%), Postives = 212/241 (87.97%), Query Frame = 0


Query: 5   YSLFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTD 64
           YSLF SRLRSRR DDSTLRILE F ASKD  SLMDV S  KE+L FESLSIIRET EKTD
Sbjct: 9   YSLFCSRLRSRRLDDSTLRILEFFSASKDTMSLMDVKSGVKELLSFESLSIIRETVEKTD 68

Query: 65  DHKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLH 124
           D KLLVIEFLVRAFALVGDIESCLALRYEALNFR LKSFNQP LQVSHAEWLNFAEHSL+
Sbjct: 69  DQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWLNFAEHSLN 128

Query: 125 AGFFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHSVQAL 184
           AGFFSI+IKAYEQALSSLQQSDTANYTSHGS K  EV+EKI RLKDHAL  AGSHSVQAL
Sbjct: 129 AGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKCAEVIEKIKRLKDHALKSAGSHSVQAL 188

Query: 185 TSDYLKKKVTERNRKISSSCTRKFTASTLFINGIRNYNARKLHEYRSFEGVNQGRTRSSF 244
           TS+YLKK+VTERNRKISSSCTRKFTASTLF NGIRN+NA++LHEY++ EG+   R    F
Sbjct: 189 TSEYLKKRVTERNRKISSSCTRKFTASTLFRNGIRNHNAKRLHEYQALEGLTSNRLLDLF 248

Query: 245 V 246
           +
Sbjct: 249 I 249

[Close]

BLAST of CsaV3_1G015330 vs. TAIR 10
Match: AT1G07060.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 139.0 bits (349), Expect = 5.2e-33
Identity = 79/174 (45.40%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 7   LFLSRLRSRRFDDSTLRILESFPASKDATSLMDVNSSFKEVLRFESLSIIRETSEKTDDH 66
           LF++R++ RRFD+ +LRILE    + +  S ++V S  ++ +R ES+ I  E + ++   
Sbjct: 38  LFINRVQDRRFDEESLRILELSLVAMNVKSFLEVRSRLRDFMRSESVVIFGELTGESMVA 97

Query: 67  KLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLHAG 126
           KL V+EF  RAFAL+GD+ESCLA+RYEALN R LKS +  WL VSH+EW  FA  S+  G
Sbjct: 98  KLSVLEFFARAFALLGDMESCLAMRYEALNLRQLKSPSCLWLGVSHSEWTKFAVQSMENG 157

Query: 127 FFSISIKAYEQALSSLQQSDTANYTSHGSFKRTEVMEKINRLKDHALNLAGSHS 181
           F SI+ KA E AL SL++       S  +    +  EK+ RL+D A +L  SHS
Sbjct: 158 FPSIAGKASENALLSLKKDSLIEPKSEDNSDILDAAEKVRRLRDSAASLTSSHS 211

The following BLAST results are available for this feature:

BLAST of CsaV3_1G015330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139510.2	5.6e-138	100.00	protein DOUBLE-STRAND BREAK FORMATION isoform X1 [Cucumis sativus] >KGN64980.1 h...	[more]
XP_011654706.1	2.5e-117	100.00	protein DOUBLE-STRAND BREAK FORMATION isoform X2 [Cucumis sativus]	[more]
XP_008464290.1	2.7e-116	93.67	PREDICTED: uncharacterized protein LOC103502216 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_038895344.1	1.1e-101	81.85	protein DOUBLE-STRAND BREAK FORMATION isoform X1 [Benincasa hispida]	[more]
XP_022970621.1	1.1e-101	85.53	uncharacterized protein LOC111469552 isoform X2 [Cucurbita maxima]	[more]

BLAST of CsaV3_1G015330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX33	7.4e-32	45.40	Protein DOUBLE-STRAND BREAK FORMATION OS=Arabidopsis thaliana OX=3702 GN=DFO PE=...	[more]

BLAST of CsaV3_1G015330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSV1	2.7e-138	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G171020 PE=4 SV=1	[more]
A0A1S3CL48	1.3e-116	93.67	uncharacterized protein LOC103502216 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1I136	5.4e-102	85.53	uncharacterized protein LOC111469552 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1I645	1.6e-101	86.58	uncharacterized protein LOC111469552 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HMC3	1.0e-100	82.57	uncharacterized protein LOC111464906 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsaV3_1G015330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07060.1	5.2e-33	45.40	unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044969	Protein DOUBLE-STRAND BREAK FORMATION	PANTHER	PTHR37176	F10K1.23	coord: 4..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G015330.1	CsaV3_1G015330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042138	meiotic DNA double-strand break formation