CsaV3_1G015210 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G015210
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	receptor-like kinase TMK3
Location	chr1: 10822894 .. 10823542 (+)
RNA-Seq Expression	CsaV3_1G015210
Synteny	CsaV3_1G015210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGATGACAAGTTGGGGCTGTGTATCTCTCTCATTTTGTTGTGTCTTTCAACTGTTTGTTTTTGTACCTCTGACATAAATGATGTCAAAATTCTGAATGATTTCAGAGAGGGCTTGGAAAATCCAGAGCTTCTCAAATGGCCTGATAATGGGGATGACCCATGCGGGATTCCTCCATGGCCTCATGTTTACTGTGCAGGTGATAGAGTTTCTCAGATTTAGGTTCAGGGTTTGGGTCTAAAAGGGCCCTTGCCTCAGAATTTTAACCAGCTCTCTAAGCTCTCCAATTTGGGTCTTTGAATATAATCCTTTCAATGCCGCTGTTGATGAGCTTGCCAAGTCAGTTCAGCTCACAAATCTTTCACTGGTGCAGAGTAATCTGGCTGGACCTCTCCCTGAGTTCTTGGGGACATTGTCATCACTAACAACTTTGAAGCTTTCCTATAACAGGTTAACAGGTCAAATTCCTAAAAGTTTTGGTCAGTTTTTTATGCAGATTTTATGGCTAAATGATCAAGATATAGGAATGACCGGTCCGATTGACGTAATTTCATCAATGTCTTCTTTGACTCAACTATGGCTTCATGGAAACCAGTTCTTAGGGGTTATCCCTCAAAATATTGGGGATCTTAGTATCTTTGTATGA

mRNA sequence

ATGGTGGATGACAAGTTGGGGCTGTGTATCTCTCTCATTTTGTTGTGTCTTTCAACTGTTTGTTTTTGTACCTCTGACATAAATGATGTCAAAATTCTGAATGATTTCAGAGAGGGCTTGGAAAATCCAGAGCTTCTCAAATGGCCTGATAATGGGGATGACCCATGCGGGATTCCTCCATGGCCTCATGTTTACTGTGCAGGTGATAGAGGCCCTTGCCTCAGAATTTTAACCAGCTCTCTAAGCTCTCCAATTTGGGTCTTTGAATATAATCCTTTCAATGCCGCTGTTGATGAGCTTGCCAAGTCAGTTCAGCTCACAAATCTTTCACTGGTGCAGAGTAATCTGGCTGGACCTCTCCCTGAGTTCTTGGGGACATTGTCATCACTAACAACTTTGAAGCTTTCCTATAACAGGTTAACAGGTCAAATTCCTAAAAGTTTTGGTCAGTTTTTTATGCAGATTTTATGGCTAAATGATCAAGATATAGGAATGACCGGTCCGATTGACGTAATTTCATCAATGTCTTCTTTGACTCAACTATGGCTTCATGGAAACCAGTTCTTAGGGGTTATCCCTCAAAATATTGGGGATCTTAGTATCTTTGTATGA

Coding sequence (CDS)

ATGGTGGATGACAAGTTGGGGCTGTGTATCTCTCTCATTTTGTTGTGTCTTTCAACTGTTTGTTTTTGTACCTCTGACATAAATGATGTCAAAATTCTGAATGATTTCAGAGAGGGCTTGGAAAATCCAGAGCTTCTCAAATGGCCTGATAATGGGGATGACCCATGCGGGATTCCTCCATGGCCTCATGTTTACTGTGCAGGTGATAGAGGCCCTTGCCTCAGAATTTTAACCAGCTCTCTAAGCTCTCCAATTTGGGTCTTTGAATATAATCCTTTCAATGCCGCTGTTGATGAGCTTGCCAAGTCAGTTCAGCTCACAAATCTTTCACTGGTGCAGAGTAATCTGGCTGGACCTCTCCCTGAGTTCTTGGGGACATTGTCATCACTAACAACTTTGAAGCTTTCCTATAACAGGTTAACAGGTCAAATTCCTAAAAGTTTTGGTCAGTTTTTTATGCAGATTTTATGGCTAAATGATCAAGATATAGGAATGACCGGTCCGATTGACGTAATTTCATCAATGTCTTCTTTGACTCAACTATGGCTTCATGGAAACCAGTTCTTAGGGGTTATCCCTCAAAATATTGGGGATCTTAGTATCTTTGTATGA

Protein sequence

MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPPWPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQLWLHGNQFLGVIPQNIGDLSIFV*

Homology

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BLAST of CsaV3_1G015210 vs. NCBI nr
Match: KGN64970.1 (hypothetical protein Csa_022794 [Cucumis sativus])

HSP 1 Score: 423.7 bits (1088), Expect = 9.0e-115
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP
Sbjct: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL 120
           WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL
Sbjct: 61  WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL 120

Query: 121 PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQ 180
           PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQ
Sbjct: 121 PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQ 180

Query: 181 LWLHGNQFLGVIPQNIGDLSIFV 204
           LWLHGNQFLGVIPQNIGDLSIFV
Sbjct: 181 LWLHGNQFLGVIPQNIGDLSIFV 203

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BLAST of CsaV3_1G015210 vs. NCBI nr
Match: XP_038877227.1 (receptor-like kinase TMK3 [Benincasa hispida])

HSP 1 Score: 311.2 bits (796), Expect = 6.5e-81
Identity = 164/264 (62.12%), Postives = 175/264 (66.29%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVDD+LGLCISLILL LSTVC C +DINDVKILNDFREGLEN ELLKWPDNGDDPCGIPP
Sbjct: 1   MVDDQLGLCISLILLSLSTVCLCATDINDVKILNDFREGLENQELLKWPDNGDDPCGIPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSP------------------------------------ 120
           WPHVYCAGDR   +++    L  P                                    
Sbjct: 61  WPHVYCAGDRVSQIQVQGLGLKGPLPSNFNQLSKLSNLGLQKNKFNGALPSFSGLSELEF 120

Query: 121 -----------------------IWVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                  +   +YNPFNA V     DELAKSV+LTNLSLVQSNL
Sbjct: 121 AYLDFNEFDTIPSDFFDGLSSIRVLALDYNPFNATVGWSLPDELAKSVELTNLSLVQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMS 201
           AGPLPEFLGTL SLT LKLSYNRLTG IPKSFGQ  MQILWLNDQD GMTGPIDVI SM+
Sbjct: 181 AGPLPEFLGTLPSLTALKLSYNRLTGPIPKSFGQSLMQILWLNDQDTGMTGPIDVIPSMT 240

[Close]

BLAST of CsaV3_1G015210 vs. NCBI nr
Match: XP_022142500.1 (receptor-like kinase TMK3 [Momordica charantia])

HSP 1 Score: 297.4 bits (760), Expect = 9.7e-77
Identity = 156/264 (59.09%), Postives = 171/264 (64.77%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MV+++  LC SL+LLCLS+VCFC +D NDVKILNDFREGLENPELLKWP NGDDPCG PP
Sbjct: 1   MVNEEQRLCFSLVLLCLSSVCFCATDPNDVKILNDFREGLENPELLKWPVNGDDPCGTPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSP------------------------------------ 120
           WPHVYCAGDR   +++    L  P                                    
Sbjct: 61  WPHVYCAGDRVSQIQVQGLGLKGPLPQNFNQLSKLSNLGLQKNKFNGALPSFSGLSELEF 120

Query: 121 -----------------------IWVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                  +   +YNPFNA V     DELA+SVQLTNLSLVQSNL
Sbjct: 121 AYLDFNEFDTIPSDFFDGLSSVRVLALDYNPFNATVGWSLPDELARSVQLTNLSLVQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMS 201
           AGPLPEFLGTL SLT LKLSYNRL+G IPKSFGQ  MQILWLNDQD GMTGPIDVI SM+
Sbjct: 181 AGPLPEFLGTLPSLTALKLSYNRLSGTIPKSFGQSLMQILWLNDQDTGMTGPIDVIPSMT 240

[Close]

BLAST of CsaV3_1G015210 vs. NCBI nr
Match: XP_022967055.1 (receptor-like kinase TMK3 [Cucurbita maxima])

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-75
Identity = 152/264 (57.58%), Postives = 168/264 (63.64%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           M+D  LGLCISL+LLC STVCFC +D+NDVKILND R GLENPELLKWPDNGDDPCGIPP
Sbjct: 3   MMDYNLGLCISLVLLCTSTVCFCATDLNDVKILNDLRMGLENPELLKWPDNGDDPCGIPP 62

Query: 61  WPHVYCAGDRGPCLRILTSSLSSP------------------------------------ 120
           WPHVYCAGDR   +++    L  P                                    
Sbjct: 63  WPHVYCAGDRVSQIQVQGLGLKGPLPQNLNQLSKLSNLGLQKNKFNGALPSFSGLSELEF 122

Query: 121 -----------------------IWVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                  +   +YNPFNA       DELAKSVQLTNLSLV SNL
Sbjct: 123 AYLDFNEFDTIPLDFFNGLTNIRVLALDYNPFNATAGWSLPDELAKSVQLTNLSLVHSNL 182

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMS 201
            GPLPEFLGTL SLT LKLSYNRLTG IP+SFGQ  MQILWLNDQD GMTG IDV+  M+
Sbjct: 183 VGPLPEFLGTLPSLTALKLSYNRLTGPIPESFGQSLMQILWLNDQDTGMTGSIDVVPLMT 242

[Close]

BLAST of CsaV3_1G015210 vs. NCBI nr
Match: XP_023520709.1 (receptor-like kinase TMK3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.0 bits (746), Expect = 4.1e-75
Identity = 150/264 (56.82%), Postives = 171/264 (64.77%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVD+KLGLCISL LLCLS+VC   +D+NDVKILNDF++GL+NPELL+WPDNGDDPCG+PP
Sbjct: 1   MVDEKLGLCISLFLLCLSSVCLYATDVNDVKILNDFKKGLDNPELLEWPDNGDDPCGVPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSPI----------------------------------- 120
           WPHVYC+GDR   +++    L  P+                                   
Sbjct: 61  WPHVYCSGDRVSQIQVQGLGLKGPLPPNFNHLSKLSNLGLQKNKFNGALPSFSGLSELEF 120

Query: 121 ------------------------WVFEYNPFNAA-----VDELAKSVQLTNLSLVQSNL 180
                                      +YNP NA       DELAKSVQLTNLSL+QSNL
Sbjct: 121 AFLNDNEFDTIPSDFFDGLSSIRELALDYNPLNATSGWTLPDELAKSVQLTNLSLIQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMS 201
           AGPLPEFLGTL SL+ LKLSYNRLTG IPKSFGQ  MQILWLN QD GM GP+DVI SM+
Sbjct: 181 AGPLPEFLGTLPSLSALKLSYNRLTGPIPKSFGQSLMQILWLNGQDTGMIGPLDVIPSMT 240

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BLAST of CsaV3_1G015210 vs. ExPASy Swiss-Prot
Match: Q9LK43 (Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 99  ELAKSVQLTNLSLVQSNLAGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWL 158
           EL  S  LT + L  +N+AG LP+   +L+SL  L+LSYN +TG +P S G+  +Q LW+
Sbjct: 153 ELVDSTSLTTIYLDNTNIAGVLPDIFDSLASLQNLRLSYNNITGVLPPSLGKSSIQNLWI 212

Query: 159 NDQDIGMTGPIDVISSMSSLTQLWLHGNQFLGVIP-----QNIGDLSI 202
           N+QD+GM+G I+V+SSM+SL+Q WLH N F G IP     +N+ DL +
Sbjct: 213 NNQDLGMSGTIEVLSSMTSLSQAWLHKNHFFGPIPDLSKSENLFDLQL 260

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BLAST of CsaV3_1G015210 vs. ExPASy Swiss-Prot
Match: Q9SIT1 (Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.4e-15
Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 89  EYNPFNAAV--DELAKSVQLTNLSLVQSNLAGPLPEFLG--TLSSLTTLKLSYNRLTGQI 148
           E NPF+  V  D + ++  L NL+L   ++ G +P+F G  +L SLT LKLS N L G++
Sbjct: 144 ENNPFDPWVIPDTVKEATSLQNLTLSNCSIIGKIPDFFGSQSLPSLTNLKLSQNGLEGEL 203

Query: 149 PKSFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQLWLHGNQFLGVIPQNIGDLSIFV 204
           P SF    +Q L+LN Q   + G I V+ +M+SL ++ L GNQF G IP   G +S+ V
Sbjct: 204 PMSFAGTSIQSLFLNGQK--LNGSISVLGNMTSLVEVSLQGNQFSGPIPDLSGLVSLRV 260

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BLAST of CsaV3_1G015210 vs. ExPASy Swiss-Prot
Match: P43298 (Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.0e-12
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 91  NPFNA--AVDELAKSVQLTNLSLVQSNLAGPLPEFLG--TLSSLTTLKLSYNRLTGQIPK 150
           NPF +    + L  +  L N S   +N++G LP FLG      L+ L L++N L G++P 
Sbjct: 145 NPFKSWEIPESLRNASALQNFSANSANVSGSLPGFLGPDEFPGLSILHLAFNNLEGELPM 204

Query: 151 SFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQLWLHGNQFLGVIPQNIG 198
           S     +Q LWLN Q   +TG I V+ +M+ L ++WLH N+F G +P   G
Sbjct: 205 SLAGSQVQSLWLNGQK--LTGDITVLQNMTGLKEVWLHSNKFSGPLPDFSG 253

[Close]

BLAST of CsaV3_1G015210 vs. ExPASy Swiss-Prot
Match: Q9FYK0 (Receptor-like kinase TMK2 OS=Arabidopsis thaliana OX=3702 GN=TMK2 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.3e-12
Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 91  NPFNAAV--DELAKSVQLTNLSLVQSNLAGPLPEFL---GTLSSLTTLKLSYNRLTGQIP 150
           NPF++ V    L  +  L + S V  NL+G +P++L      SSLTTLKLSYN L  + P
Sbjct: 141 NPFDSWVIPPSLENATSLVDFSAVNCNLSGKIPDYLFEGKDFSSLTTLKLSYNSLVCEFP 200

Query: 151 KSFGQFFMQILWLNDQD--IGMTGPIDVISSMSSLTQLWLHGNQFLGVIPQNIGDLSI 202
            +F    +Q+L LN Q     + G I  +  M+SLT + L GN F G +P   G +S+
Sbjct: 201 MNFSDSRVQVLMLNGQKGREKLHGSISFLQKMTSLTNVTLQGNSFSGPLPDFSGLVSL 258

[Close]

BLAST of CsaV3_1G015210 vs. ExPASy Swiss-Prot
Match: F4J8G2 (Receptor-like protein 33 OS=Arabidopsis thaliana OX=3702 GN=RLP33 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 100 LAKSVQLTNLSLVQSNLAGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQF-FMQILWL 159
           L     LT+L L  +N  G +P  LG LS LT L LS N   G+IP SFG    + IL L
Sbjct: 155 LGNLFHLTSLHLYDNNFGGEIPSSLGNLSYLTFLDLSTNNFVGEIPSSFGSLNQLSILRL 214

Query: 160 NDQDIGMTGPIDVISSMSSLTQLWLHGNQFLGVIPQNIGDLSI 202
           ++  +    P++VI +++ L+++ L  NQF G +P NI  LSI
Sbjct: 215 DNNKLSGNLPLEVI-NLTKLSEISLSHNQFTGTLPPNITSLSI 256

[Close]

BLAST of CsaV3_1G015210 vs. ExPASy TrEMBL
Match: A0A0A0LST6 (LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169940 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.3e-115
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP
Sbjct: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL 120
           WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL
Sbjct: 61  WPHVYCAGDRGPCLRILTSSLSSPIWVFEYNPFNAAVDELAKSVQLTNLSLVQSNLAGPL 120

Query: 121 PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQ 180
           PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQ
Sbjct: 121 PEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQ 180

Query: 181 LWLHGNQFLGVIPQNIGDLSIFV 204
           LWLHGNQFLGVIPQNIGDLSIFV
Sbjct: 181 LWLHGNQFLGVIPQNIGDLSIFV 203

[Close]

BLAST of CsaV3_1G015210 vs. ExPASy TrEMBL
Match: A0A6J1CL40 (receptor-like kinase TMK3 OS=Momordica charantia OX=3673 GN=LOC111012604 PE=3 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.7e-77
Identity = 156/264 (59.09%), Postives = 171/264 (64.77%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MV+++  LC SL+LLCLS+VCFC +D NDVKILNDFREGLENPELLKWP NGDDPCG PP
Sbjct: 1   MVNEEQRLCFSLVLLCLSSVCFCATDPNDVKILNDFREGLENPELLKWPVNGDDPCGTPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSP------------------------------------ 120
           WPHVYCAGDR   +++    L  P                                    
Sbjct: 61  WPHVYCAGDRVSQIQVQGLGLKGPLPQNFNQLSKLSNLGLQKNKFNGALPSFSGLSELEF 120

Query: 121 -----------------------IWVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                  +   +YNPFNA V     DELA+SVQLTNLSLVQSNL
Sbjct: 121 AYLDFNEFDTIPSDFFDGLSSVRVLALDYNPFNATVGWSLPDELARSVQLTNLSLVQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMS 201
           AGPLPEFLGTL SLT LKLSYNRL+G IPKSFGQ  MQILWLNDQD GMTGPIDVI SM+
Sbjct: 181 AGPLPEFLGTLPSLTALKLSYNRLSGTIPKSFGQSLMQILWLNDQDTGMTGPIDVIPSMT 240

[Close]

BLAST of CsaV3_1G015210 vs. ExPASy TrEMBL
Match: A0A6J1HTA6 (receptor-like kinase TMK3 OS=Cucurbita maxima OX=3661 GN=LOC111466570 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.9e-76
Identity = 152/264 (57.58%), Postives = 168/264 (63.64%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           M+D  LGLCISL+LLC STVCFC +D+NDVKILND R GLENPELLKWPDNGDDPCGIPP
Sbjct: 3   MMDYNLGLCISLVLLCTSTVCFCATDLNDVKILNDLRMGLENPELLKWPDNGDDPCGIPP 62

Query: 61  WPHVYCAGDRGPCLRILTSSLSSP------------------------------------ 120
           WPHVYCAGDR   +++    L  P                                    
Sbjct: 63  WPHVYCAGDRVSQIQVQGLGLKGPLPQNLNQLSKLSNLGLQKNKFNGALPSFSGLSELEF 122

Query: 121 -----------------------IWVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                  +   +YNPFNA       DELAKSVQLTNLSLV SNL
Sbjct: 123 AYLDFNEFDTIPLDFFNGLTNIRVLALDYNPFNATAGWSLPDELAKSVQLTNLSLVHSNL 182

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMS 201
            GPLPEFLGTL SLT LKLSYNRLTG IP+SFGQ  MQILWLNDQD GMTG IDV+  M+
Sbjct: 183 VGPLPEFLGTLPSLTALKLSYNRLTGPIPESFGQSLMQILWLNDQDTGMTGSIDVVPLMT 242

[Close]

BLAST of CsaV3_1G015210 vs. ExPASy TrEMBL
Match: A0A6J1EP20 (receptor-like kinase TMK3 OS=Cucurbita moschata OX=3662 GN=LOC111434293 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.2e-74
Identity = 148/264 (56.06%), Postives = 170/264 (64.39%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVD++LGLC SL LLCLS+VC   +D+NDVKILNDF++GL+NPELL+WPDNGDDPCG+PP
Sbjct: 1   MVDERLGLCFSLFLLCLSSVCLYATDVNDVKILNDFKKGLDNPELLEWPDNGDDPCGVPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSPI----------------------------------- 120
           WPHVYC+GDR   +++    L  P+                                   
Sbjct: 61  WPHVYCSGDRVSQIQVQGLGLKGPLPPNFNHLSKLSNLGLQKNKFNGALPSFSGLSELEF 120

Query: 121 ------------------------WVFEYNPFNAAV-----DELAKSVQLTNLSLVQSNL 180
                                      +YNP NA V     DELAKSVQLTNLSL+QSNL
Sbjct: 121 AFLNDNEFDTIPADFFDGLSSIRELALDYNPLNATVGWTLPDELAKSVQLTNLSLIQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMS 201
           AGPLPEFLGTL SL+ LKLSYNRLTG IPKSFGQ  MQILWLN QD GM G +DVI SM+
Sbjct: 181 AGPLPEFLGTLPSLSALKLSYNRLTGPIPKSFGQSLMQILWLNGQDTGMIGSLDVIPSMT 240

[Close]

BLAST of CsaV3_1G015210 vs. ExPASy TrEMBL
Match: A0A6J1I7R7 (receptor-like kinase TMK3 OS=Cucurbita maxima OX=3661 GN=LOC111471634 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.9e-74
Identity = 147/264 (55.68%), Postives = 170/264 (64.39%), Query Frame = 0


Query: 1   MVDDKLGLCISLILLCLSTVCFCTSDINDVKILNDFREGLENPELLKWPDNGDDPCGIPP 60
           MVD+KLGLC SL LLCLS+VC   +D+NDVKILNDF++GL+NPELL+WP+NGDDPCG+PP
Sbjct: 1   MVDEKLGLCFSLFLLCLSSVCLYATDVNDVKILNDFKKGLDNPELLEWPENGDDPCGVPP 60

Query: 61  WPHVYCAGDRGPCLRILTSSLSSPI----------------------------------- 120
           WPHVYC+GDR   +++    L  P+                                   
Sbjct: 61  WPHVYCSGDRVSQIQVQGLGLKGPLPPNFNHLSKLSNLGLQKNMFNGALPSFSGLSELEF 120

Query: 121 ------------------------WVFEYNPFNAA-----VDELAKSVQLTNLSLVQSNL 180
                                      +YNP NA       D+LAKSVQLTNLSL+QSNL
Sbjct: 121 AFLNDNEFDTIPADFFDDLSSIRELALDYNPLNATSGWTLPDKLAKSVQLTNLSLIQSNL 180

Query: 181 AGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWLNDQDIGMTGPIDVISSMS 201
           AGPLPEFLGTL SL+ LKLSYNRLTG IPKSFGQ  MQILWLN QD GM GP+DVI SM+
Sbjct: 181 AGPLPEFLGTLPSLSALKLSYNRLTGPIPKSFGQSLMQILWLNGQDTGMIGPLDVIPSMT 240

[Close]

BLAST of CsaV3_1G015210 vs. TAIR 10
Match: AT3G23750.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 108.2 bits (269), Expect = 7.8e-24
Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 99  ELAKSVQLTNLSLVQSNLAGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQFFMQILWL 158
           EL  S  LT + L  +N+AG LP+   +L+SL  L+LSYN +TG +P S G+  +Q LW+
Sbjct: 153 ELVDSTSLTTIYLDNTNIAGVLPDIFDSLASLQNLRLSYNNITGVLPPSLGKSSIQNLWI 212

Query: 159 NDQDIGMTGPIDVISSMSSLTQLWLHGNQFLGVIP-----QNIGDLSI 202
           N+QD+GM+G I+V+SSM+SL+Q WLH N F G IP     +N+ DL +
Sbjct: 213 NNQDLGMSGTIEVLSSMTSLSQAWLHKNHFFGPIPDLSKSENLFDLQL 260

[Close]

BLAST of CsaV3_1G015210 vs. TAIR 10
Match: AT2G01820.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 82.0 bits (201), Expect = 6.0e-16
Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 89  EYNPFNAAV--DELAKSVQLTNLSLVQSNLAGPLPEFLG--TLSSLTTLKLSYNRLTGQI 148
           E NPF+  V  D + ++  L NL+L   ++ G +P+F G  +L SLT LKLS N L G++
Sbjct: 144 ENNPFDPWVIPDTVKEATSLQNLTLSNCSIIGKIPDFFGSQSLPSLTNLKLSQNGLEGEL 203

Query: 149 PKSFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQLWLHGNQFLGVIPQNIGDLSIFV 204
           P SF    +Q L+LN Q   + G I V+ +M+SL ++ L GNQF G IP   G +S+ V
Sbjct: 204 PMSFAGTSIQSLFLNGQK--LNGSISVLGNMTSLVEVSLQGNQFSGPIPDLSGLVSLRV 260

[Close]

BLAST of CsaV3_1G015210 vs. TAIR 10
Match: AT1G66150.1 (transmembrane kinase 1 )

HSP 1 Score: 75.1 bits (183), Expect = 7.3e-14
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 91  NPFNA--AVDELAKSVQLTNLSLVQSNLAGPLPEFLG--TLSSLTTLKLSYNRLTGQIPK 150
           NPF +    + L  +  L N S   +N++G LP FLG      L+ L L++N L G++P 
Sbjct: 145 NPFKSWEIPESLRNASALQNFSANSANVSGSLPGFLGPDEFPGLSILHLAFNNLEGELPM 204

Query: 151 SFGQFFMQILWLNDQDIGMTGPIDVISSMSSLTQLWLHGNQFLGVIPQNIG 198
           S     +Q LWLN Q   +TG I V+ +M+ L ++WLH N+F G +P   G
Sbjct: 205 SLAGSQVQSLWLNGQK--LTGDITVLQNMTGLKEVWLHSNKFSGPLPDFSG 253

[Close]

BLAST of CsaV3_1G015210 vs. TAIR 10
Match: AT1G24650.1 (Leucine-rich repeat protein kinase family protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-13
Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 91  NPFNAAV--DELAKSVQLTNLSLVQSNLAGPLPEFL---GTLSSLTTLKLSYNRLTGQIP 150
           NPF++ V    L  +  L + S V  NL+G +P++L      SSLTTLKLSYN L  + P
Sbjct: 141 NPFDSWVIPPSLENATSLVDFSAVNCNLSGKIPDYLFEGKDFSSLTTLKLSYNSLVCEFP 200

Query: 151 KSFGQFFMQILWLNDQD--IGMTGPIDVISSMSSLTQLWLHGNQFLGVIPQNIGDLSI 202
            +F    +Q+L LN Q     + G I  +  M+SLT + L GN F G +P   G +S+
Sbjct: 201 MNFSDSRVQVLMLNGQKGREKLHGSISFLQKMTSLTNVTLQGNSFSGPLPDFSGLVSL 258

[Close]

BLAST of CsaV3_1G015210 vs. TAIR 10
Match: AT3G05660.1 (receptor like protein 33 )

HSP 1 Score: 71.6 bits (174), Expect = 8.1e-13
Identity = 42/103 (40.78%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 100 LAKSVQLTNLSLVQSNLAGPLPEFLGTLSSLTTLKLSYNRLTGQIPKSFGQF-FMQILWL 159
           L     LT+L L  +N  G +P  LG LS LT L LS N   G+IP SFG    + IL L
Sbjct: 155 LGNLFHLTSLHLYDNNFGGEIPSSLGNLSYLTFLDLSTNNFVGEIPSSFGSLNQLSILRL 214

Query: 160 NDQDIGMTGPIDVISSMSSLTQLWLHGNQFLGVIPQNIGDLSI 202
           ++  +    P++VI +++ L+++ L  NQF G +P NI  LSI
Sbjct: 215 DNNKLSGNLPLEVI-NLTKLSEISLSHNQFTGTLPPNITSLSI 256

The following BLAST results are available for this feature:

BLAST of CsaV3_1G015210 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64970.1	9.0e-115	100.00	hypothetical protein Csa_022794 [Cucumis sativus]	[more]
XP_038877227.1	6.5e-81	62.12	receptor-like kinase TMK3 [Benincasa hispida]	[more]
XP_022142500.1	9.7e-77	59.09	receptor-like kinase TMK3 [Momordica charantia]	[more]
XP_022967055.1	1.8e-75	57.58	receptor-like kinase TMK3 [Cucurbita maxima]	[more]
XP_023520709.1	4.1e-75	56.82	receptor-like kinase TMK3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_1G015210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK43	1.1e-22	48.15	Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1	[more]
Q9SIT1	8.4e-15	42.02	Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1	[more]
P43298	1.0e-12	37.84	Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1	[more]
Q9FYK0	2.3e-12	38.98	Receptor-like kinase TMK2 OS=Arabidopsis thaliana OX=3702 GN=TMK2 PE=1 SV=1	[more]
F4J8G2	1.1e-11	40.78	Receptor-like protein 33 OS=Arabidopsis thaliana OX=3702 GN=RLP33 PE=3 SV=1	[more]

BLAST of CsaV3_1G015210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LST6	4.3e-115	100.00	LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169940 PE=...	[more]
A0A6J1CL40	4.7e-77	59.09	receptor-like kinase TMK3 OS=Momordica charantia OX=3673 GN=LOC111012604 PE=3 SV...	[more]
A0A6J1HTA6	8.9e-76	57.58	receptor-like kinase TMK3 OS=Cucurbita maxima OX=3661 GN=LOC111466570 PE=3 SV=1	[more]
A0A6J1EP20	2.2e-74	56.06	receptor-like kinase TMK3 OS=Cucurbita moschata OX=3662 GN=LOC111434293 PE=3 SV=...	[more]
A0A6J1I7R7	4.9e-74	55.68	receptor-like kinase TMK3 OS=Cucurbita maxima OX=3661 GN=LOC111471634 PE=3 SV=1	[more]

BLAST of CsaV3_1G015210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23750.1	7.8e-24	48.15	Leucine-rich repeat protein kinase family protein	[more]
AT2G01820.1	6.0e-16	42.02	Leucine-rich repeat protein kinase family protein	[more]
AT1G66150.1	7.3e-14	37.84	transmembrane kinase 1	[more]
AT1G24650.1	1.6e-13	38.98	Leucine-rich repeat protein kinase family protein	[more]
AT3G05660.1	8.1e-13	40.78	receptor like protein 33	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 28..66 e-value: 3.2E-4 score: 21.0
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 23..202 e-value: 1.8E-24 score: 88.4
None	No IPR available	PANTHER	PTHR47986	OSJNBA0070M12.3 PROTEIN	coord: 97..200
None	No IPR available	PANTHER	PTHR47986	OSJNBA0070M12.3 PROTEIN	coord: 9..71
None	No IPR available	PANTHER	PTHR47986:SF13	RECEPTOR PROTEIN KINASE TMK1-LIKE	coord: 9..71
None	No IPR available	PANTHER	PTHR47986:SF13	RECEPTOR PROTEIN KINASE TMK1-LIKE	coord: 97..200
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 54..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G015210.1	CsaV3_1G015210.1	mRNA