CsaV3_1G015180 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G015180
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	NDR1/HIN1-like protein 1
Location	chr1: 10798345 .. 10799374 (-)
RNA-Seq Expression	CsaV3_1G015180
Synteny	CsaV3_1G015180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGTAAAGGATTGCGACCACCACCACCATCACGACTGCGAGCGCCGCCGTCTCTACCGGCGAATAGCCTGTGTCATCTTCACCGTGGTGCTTCTAATTGGCCTAGTCATCTTCCTCATCTGGGCCATCCTCCGACCGTCGAAGCCCCGTCTCATCCTCCAAGACGTCACCCTTCTTGGCCTTAATGTCTCGTCAGTGCCACCAGCCGCAATCTCGACAACCATGCAAATCACCATCTCCTCCACAACCCCAACAACCGCATTGGTGTTTACTATCAGGTCATGGATGTCTACGCCGCGTACCGCGGCCAGCAAGTCACTCTCCCGACGCTCTTGCCGCCTACTTACCAGGGCCACAATGATGTTACTGTTTGGTCGCCGTTTTTGTATGGCGAAGCTGTGCCGGTGGCACCGGAATTTGCTGAAGCTTTGAATGAAGATAACAATGTTGGAGCCATGCTGTTCAATATTAAGGTCAATGGACAGGTTTGTTTATTTTCAACTCTCTGACTCACAAGTTCTTTATCTTTCTTTACATACCTTTTTCATAGCTTAACTTCTCATTTTAAATTTTAATTCTATACACATATTTTGTTATTTTAAAGCATAAAGCACTTAGGCTTTTAATCCTGGTAATGGAAGGTTTGAATCCTTCGTATCCTATTGTTGTATTTTTTGAGTCAATTCAAATTATTAAAATTGGCGTTCCAAATACTTATGGGAGGATTTAAATCTTTCTAACCTGGTCAGATGACATAAAGTTGAACTTTCGTCAAGTTAACATAAGAAGAGAAATTCGAAGAAAAGAAAGAAGTTGCATCTCTTCTTTGTAATTTAATATTTATTGTAGACTTTATCGTCGTATTGCACAACAGGTTAGATGGAAAGTCGGGAGCTGGATTTCGGGCAGATATCGGCTAAACGCGAACTGCCCGGCGTATATAAAGTTTGGTGATCCAAAGAATGGAATTGCTTTCGGACCCGCCATGAAGTTTCAGTTCGTTCAGGGCTGTTATGTTGATATTTGA

mRNA sequence

ATGACGGTAAAGGATTGCGACCACCACCACCATCACGACTGCGAGCGCCGCCGTCTCTACCGGCGAATAGCCTGTGTCATCTTCACCGTGGTGCTTCTAATTGGCCTAGTCATCTTCCTCATCTGGGCCATCCTCCGACCGTCGAAGCCCCGTCTCATCCTCCAAGACGTCACCCTTCTTGGCCTTAATGTCATGGATGTCTACGCCGCGTACCGCGGCCAGCAAGTCACTCTCCCGACGCTCTTGCCGCCTACTTACCAGGGCCACAATGATGTTACTGTTTGGTCGCCGTTTTTGTATGGCGAAGCTGTGCCGGTGGCACCGGAATTTGCTGAAGCTTTGAATGAAGATAACAATGTTGGAGCCATGCTGTTCAATATTAAGGTCAATGGACAGGTTAGATGGAAAGTCGGGAGCTGGATTTCGGGCAGATATCGGCTAAACGCGAACTGCCCGGCGTATATAAAGTTTGGTGATCCAAAGAATGGAATTGCTTTCGGACCCGCCATGAAGTTTCAGTTCGTTCAGGGCTGTTATGTTGATATTTGA

Coding sequence (CDS)

ATGACGGTAAAGGATTGCGACCACCACCACCATCACGACTGCGAGCGCCGCCGTCTCTACCGGCGAATAGCCTGTGTCATCTTCACCGTGGTGCTTCTAATTGGCCTAGTCATCTTCCTCATCTGGGCCATCCTCCGACCGTCGAAGCCCCGTCTCATCCTCCAAGACGTCACCCTTCTTGGCCTTAATGTCATGGATGTCTACGCCGCGTACCGCGGCCAGCAAGTCACTCTCCCGACGCTCTTGCCGCCTACTTACCAGGGCCACAATGATGTTACTGTTTGGTCGCCGTTTTTGTATGGCGAAGCTGTGCCGGTGGCACCGGAATTTGCTGAAGCTTTGAATGAAGATAACAATGTTGGAGCCATGCTGTTCAATATTAAGGTCAATGGACAGGTTAGATGGAAAGTCGGGAGCTGGATTTCGGGCAGATATCGGCTAAACGCGAACTGCCCGGCGTATATAAAGTTTGGTGATCCAAAGAATGGAATTGCTTTCGGACCCGCCATGAAGTTTCAGTTCGTTCAGGGCTGTTATGTTGATATTTGA

Protein sequence

MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLLGLNVMDVYAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNANCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI*

Homology

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BLAST of CsaV3_1G015180 vs. NCBI nr
Match: KAE8652821.1 (hypothetical protein Csa_022886 [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 9.2e-103
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLNVMDVYAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPVAPEFAEALNEDNNV 120
           GLNVMDVYAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPVAPEFAEALNEDNNV
Sbjct: 61  GLNVMDVYAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPVAPEFAEALNEDNNV 120

Query: 121 GAMLFNIKVNGQVRWKVGSWISGRYRLNANCPAYIKFGDPKNGIAFGPAMKFQFVQGCYV 180
           GAMLFNIKVNGQVRWKVGSWISGRYRLNANCPAYIKFGDPKNGIAFGPAMKFQFVQGCYV
Sbjct: 121 GAMLFNIKVNGQVRWKVGSWISGRYRLNANCPAYIKFGDPKNGIAFGPAMKFQFVQGCYV 180

Query: 181 DI 183
           DI
Sbjct: 181 DI 182

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BLAST of CsaV3_1G015180 vs. NCBI nr
Match: XP_004139592.2 (LOW QUALITY PROTEIN: NDR1/HIN1-like protein 1 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 6.9e-98
Identity = 182/213 (85.45%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLN-------------------------------VMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLN                               VMDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSXNPNNRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
           NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 213

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BLAST of CsaV3_1G015180 vs. NCBI nr
Match: XP_008463636.1 (PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0035577.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa] >TYK30959.1 NDR1/HIN1-like protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 362.1 bits (928), Expect = 2.9e-96
Identity = 178/213 (83.57%), Postives = 181/213 (84.98%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MTVKDCDHHHHHDCERRRLYRRIACVIF+++LLIGLVIFLIWAILRPSKPRLILQDVTLL
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFSLLLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLN-------------------------------VMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLN                               VMDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNTRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
           NCPAYIKFGDPKNGIAFGP MKFQFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPTMKFQFVQGCYVDI 213

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BLAST of CsaV3_1G015180 vs. NCBI nr
Match: XP_023520711.1 (NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.8 bits (917), Expect = 5.4e-95
Identity = 175/213 (82.16%), Postives = 179/213 (84.04%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MTVKDCDHHHHHDCERRRLYRRIAC IFTV+LLI LVIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  GLNV-------------------------------MDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNV                               MDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISITMQVTISSHNPNSRIGVYYQTMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIK+NGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
           NCPAYIKFGDPKNGIAFGPAMKF+FVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

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BLAST of CsaV3_1G015180 vs. NCBI nr
Match: KAG7019347.1 (NDR1/HIN1-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.8 bits (917), Expect = 5.4e-95
Identity = 175/213 (82.16%), Postives = 179/213 (84.04%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MTVKDCDHHHHHDCERRRLYRRIAC IFTV+LLI LVIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACAIFTVLLLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  GLNV-------------------------------MDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNV                               MDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIK+NGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
           NCPAYIKFGDPKNGIAFGPAMKF+FVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

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BLAST of CsaV3_1G015180 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-46
Identity = 95/212 (44.81%), Postives = 127/212 (59.91%), Query Frame = 0


Query: 3   VKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLLGL 62
           +KDC++H H    RR+L RRI   I  V+ +I L I LIWAIL+PSKPR ILQD T+   
Sbjct: 1   MKDCENHGH---SRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAF 60

Query: 63  NV-------------------------------MDVYAAYRGQQVTLPTLLPPTYQGHND 122
           NV                               +DVYA YR QQ+T PT +PPTYQGH D
Sbjct: 61  NVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKD 120

Query: 123 VTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNANC 182
           V +WSPF+YG +VP+AP    +L+ D + G +L  I+ +G+VRWKVG++I+G+Y L+  C
Sbjct: 121 VDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKC 180

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BLAST of CsaV3_1G015180 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 7.7e-36
Identity = 81/212 (38.21%), Postives = 116/212 (54.72%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MT KDC +H            RI  VI   ++++ + IFL+W IL+P+KPR ILQD T+ 
Sbjct: 1   MTTKDCGNHGGGG--GGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVY 60

Query: 61  GLNV-----------------------------MDVYAAYRGQQVTLPTLLPPTYQGHND 120
             N+                             + VYA YR QQ+TL T +PPTYQGH +
Sbjct: 61  AFNLSQPNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKE 120

Query: 121 VTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNANC 180
             VWSPF+YG +VP+AP  A AL ++ N G +   I+ +G+VRWKVG+ I+G+Y L+  C
Sbjct: 121 DNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRC 180

Query: 181 PAYIKFGDPKNGIAFGP-AMKFQFVQGCYVDI 183
            A+I   D   G+  G  A+K+  +  C V++
Sbjct: 181 QAFINLADKAAGVHVGENAVKYMLINKCSVNV 210

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BLAST of CsaV3_1G015180 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.2e-24
Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 0


Query: 36  LVIFLIWAILRPSKPRLILQDVTLLGLNV------------------------------- 95
           L+IFL+W IL P +P   L +  +  LN+                               
Sbjct: 40  LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99

Query: 96  MDVYAAYRGQQVTLPTLLPPTYQGHNDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAML 155
           + VYAAYRGQQ+T    LPP YQ H ++ + + FL G  +PVA  F   ++ + + G ++
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159

Query: 156 FNIKVNGQVRWKVGSWISGRYRLNANCPAYIKFG 159
             +K++G++RWK+G+W+SG YR N NC A + FG
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFG 193

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BLAST of CsaV3_1G015180 vs. ExPASy TrEMBL
Match: A0A0A0LVW5 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169420 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.3e-98
Identity = 182/213 (85.45%), Postives = 182/213 (85.45%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLN-------------------------------VMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLN                               VMDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNNRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
           NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 213

[Close]

BLAST of CsaV3_1G015180 vs. ExPASy TrEMBL
Match: A0A5D3E518 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001850 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96
Identity = 178/213 (83.57%), Postives = 181/213 (84.98%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MTVKDCDHHHHHDCERRRLYRRIACVIF+++LLIGLVIFLIWAILRPSKPRLILQDVTLL
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFSLLLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLN-------------------------------VMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLN                               VMDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNTRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
           NCPAYIKFGDPKNGIAFGP MKFQFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPTMKFQFVQGCYVDI 213

[Close]

BLAST of CsaV3_1G015180 vs. ExPASy TrEMBL
Match: A0A1S3CJQ5 (NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103501736 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96
Identity = 178/213 (83.57%), Postives = 181/213 (84.98%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MTVKDCDHHHHHDCERRRLYRRIACVIF+++LLIGLVIFLIWAILRPSKPRLILQDVTLL
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFSLLLLIGLVIFLIWAILRPSKPRLILQDVTLL 60

Query: 61  GLN-------------------------------VMDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLN                               VMDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQITISSHNPNTRIGVYYQVMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
           NCPAYIKFGDPKNGIAFGP MKFQFVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPTMKFQFVQGCYVDI 213

[Close]

BLAST of CsaV3_1G015180 vs. ExPASy TrEMBL
Match: A0A6J1IAN4 (NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111471672 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.0e-94
Identity = 174/213 (81.69%), Postives = 178/213 (83.57%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MTVKDCDHHHHHDCERRRLYRRIAC IFTV+LLI LVIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHDCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  GLNV-------------------------------MDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNV                               MDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIK+NGQVRWKVGSWIS RYRLNA
Sbjct: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISDRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
           NCPAYIKFGDPKNGIAFGPAMKF+FVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

[Close]

BLAST of CsaV3_1G015180 vs. ExPASy TrEMBL
Match: A0A6J1ENV2 (NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111434247 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94
Identity = 173/213 (81.22%), Postives = 178/213 (83.57%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MTVKDCDHHHHH CERRRLYRRIAC IFTV+LLI LVIFLIWAILRPSKPRLILQDVT+ 
Sbjct: 1   MTVKDCDHHHHHHCERRRLYRRIACAIFTVILLISLVIFLIWAILRPSKPRLILQDVTVF 60

Query: 61  GLNV-------------------------------MDVYAAYRGQQVTLPTLLPPTYQGH 120
           GLNV                               MDVYAAYRGQQVTLPTLLPPTYQGH
Sbjct: 61  GLNVSSVPPAAISTTMQVTISSHNPNSRIGVYYQIMDVYAAYRGQQVTLPTLLPPTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
           NDVT+WSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIK+NGQVRWKVGSWISGRYRLNA
Sbjct: 121 NDVTIWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKINGQVRWKVGSWISGRYRLNA 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
           NCPAYIKFGDPKNGIAFGPAMKF+FVQGCYVDI
Sbjct: 181 NCPAYIKFGDPKNGIAFGPAMKFRFVQGCYVDI 213

[Close]

BLAST of CsaV3_1G015180 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-51
Identity = 100/211 (47.39%), Postives = 130/211 (61.61%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MT K+C+HHH  D    ++ +RI  ++   +  +  V+FL+WAIL P  PR +LQD T+ 
Sbjct: 1   MTEKECEHHHDED---EKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIY 60

Query: 61  GLNV-----------------------------MDVYAAYRGQQVTLPTLLPPTYQGHND 120
             NV                             +D+YA+YR QQVTL TLLP TYQGH D
Sbjct: 61  AFNVSQPNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLD 120

Query: 121 VTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNANC 180
           VT+WSPFLYG  VPVAP F+ AL++D   G +L NIK++G VRWKVG+W+SGRYRL+ NC
Sbjct: 121 VTIWSPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNC 180

Query: 181 PAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
           PAYI      +G   GPA+K+Q VQ C VD+
Sbjct: 181 PAYITLAGHFSG--DGPAVKYQLVQRCAVDV 206

[Close]

BLAST of CsaV3_1G015180 vs. TAIR 10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 188.0 bits (476), Expect = 6.9e-48
Identity = 99/212 (46.70%), Postives = 126/212 (59.43%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCER-RRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTL 60
           MT + CD H+ ++  R R + RRIA     +++ +  V+FL+WAIL P  PR +LQDVT+
Sbjct: 1   MTGRYCDQHNGYEERRMRMMMRRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTI 60

Query: 61  LGLNV-----------------------------MDVYAAYRGQQVTLPTLLPPTYQGHN 120
              NV                             +D+Y  YR Q+VTL  LLP TYQGH 
Sbjct: 61  NDFNVSQPNFLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQGHL 120

Query: 121 DVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNAN 180
           +VTVWSPFL G AVPVAP  + ALNED   G +L NIK++G VRWKVGSW+SG YRL+ N
Sbjct: 121 EVTVWSPFLIGSAVPVAPYLSSALNEDLFAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVN 180

Query: 181 CPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
           CPA+I       G   GPA+K+Q VQ C VD+
Sbjct: 181 CPAFITVTGKLTGT--GPAIKYQLVQRCAVDV 210

[Close]

BLAST of CsaV3_1G015180 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 184.9 bits (468), Expect = 5.9e-47
Identity = 95/212 (44.81%), Postives = 127/212 (59.91%), Query Frame = 0


Query: 3   VKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLLGL 62
           +KDC++H H    RR+L RRI   I  V+ +I L I LIWAIL+PSKPR ILQD T+   
Sbjct: 1   MKDCENHGH---SRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAF 60

Query: 63  NV-------------------------------MDVYAAYRGQQVTLPTLLPPTYQGHND 122
           NV                               +DVYA YR QQ+T PT +PPTYQGH D
Sbjct: 61  NVSGNPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKD 120

Query: 123 VTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNANC 182
           V +WSPF+YG +VP+AP    +L+ D + G +L  I+ +G+VRWKVG++I+G+Y L+  C
Sbjct: 121 VDIWSPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKC 180

[Close]

BLAST of CsaV3_1G015180 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-38
Identity = 85/213 (39.91%), Postives = 121/213 (56.81%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MT KDC  H  H    R++   +   I  ++LLI +VI L+WAIL+PSKPR +LQD T+ 
Sbjct: 1   MTSKDCGSHDSHSSCNRKI---VIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVF 60

Query: 61  GLNV-------------------------------MDVYAAYRGQQVTLPTLLPPTYQGH 120
             NV                               +DVYA+YR QQ+TLP+ +  TYQGH
Sbjct: 61  NFNVSGNPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGH 120

Query: 121 NDVTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNA 180
            +V VWSPF+ G +VPVAP  A  L++D++ GA++  + ++G+VRWKVGS+I+G+Y L+ 
Sbjct: 121 KEVNVWSPFVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHV 180

Query: 181 NCPAYIKFGDPKNGIAFGPAMKFQFVQGCYVDI 183
            C A I FG    G+  G   K+   + C V +
Sbjct: 181 RCHALINFGSSAAGVIVG---KYMLTETCSVSV 207

[Close]

BLAST of CsaV3_1G015180 vs. TAIR 10
Match: AT2G35960.1 (NDR1/HIN1-like 12 )

HSP 1 Score: 151.8 bits (382), Expect = 5.5e-37
Identity = 81/212 (38.21%), Postives = 116/212 (54.72%), Query Frame = 0


Query: 1   MTVKDCDHHHHHDCERRRLYRRIACVIFTVVLLIGLVIFLIWAILRPSKPRLILQDVTLL 60
           MT KDC +H            RI  VI   ++++ + IFL+W IL+P+KPR ILQD T+ 
Sbjct: 1   MTTKDCGNHGGGG--GGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVY 60

Query: 61  GLNV-----------------------------MDVYAAYRGQQVTLPTLLPPTYQGHND 120
             N+                             + VYA YR QQ+TL T +PPTYQGH +
Sbjct: 61  AFNLSQPNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKE 120

Query: 121 VTVWSPFLYGEAVPVAPEFAEALNEDNNVGAMLFNIKVNGQVRWKVGSWISGRYRLNANC 180
             VWSPF+YG +VP+AP  A AL ++ N G +   I+ +G+VRWKVG+ I+G+Y L+  C
Sbjct: 121 DNVWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRC 180

Query: 181 PAYIKFGDPKNGIAFGP-AMKFQFVQGCYVDI 183
            A+I   D   G+  G  A+K+  +  C V++
Sbjct: 181 QAFINLADKAAGVHVGENAVKYMLINKCSVNV 210

The following BLAST results are available for this feature:

BLAST of CsaV3_1G015180 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652821.1	9.2e-103	100.00	hypothetical protein Csa_022886 [Cucumis sativus]	[more]
XP_004139592.2	6.9e-98	85.45	LOW QUALITY PROTEIN: NDR1/HIN1-like protein 1 [Cucumis sativus]	[more]
XP_008463636.1	2.9e-96	83.57	PREDICTED: NDR1/HIN1-like protein 12 [Cucumis melo] >KAA0035577.1 NDR1/HIN1-like...	[more]
XP_023520711.1	5.4e-95	82.16	NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo]	[more]
KAG7019347.1	5.4e-95	82.16	NDR1/HIN1-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsaV3_1G015180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN0	8.3e-46	44.81	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9SJ54	7.7e-36	38.21	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9FI03	5.2e-24	34.42	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]

BLAST of CsaV3_1G015180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVW5	3.3e-98	85.45	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G169420 PE=4 ...	[more]
A0A5D3E518	1.4e-96	83.57	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CJQ5	1.4e-96	83.57	NDR1/HIN1-like protein 12 OS=Cucumis melo OX=3656 GN=LOC103501736 PE=4 SV=1	[more]
A0A6J1IAN4	1.0e-94	81.69	NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111471672 PE=4 SV=1	[more]
A0A6J1ENV2	1.3e-94	81.22	NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111434247 PE=4 SV=1	[more]

BLAST of CsaV3_1G015180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44220.1	1.3e-51	47.39	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G22200.1	6.9e-48	46.70	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	5.9e-47	44.81	NDR1/HIN1-like 1	[more]
AT5G06330.1	1.3e-38	39.91	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G35960.1	5.5e-37	38.21	NDR1/HIN1-like 12	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 11..64
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 65..182
None	No IPR available	PANTHER	PTHR31415:SF127	PROTEIN YLS9-LIKE	coord: 11..64
None	No IPR available	PANTHER	PTHR31415:SF127	PROTEIN YLS9-LIKE	coord: 65..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G015180.1	CsaV3_1G015180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism