CsaV3_1G015000 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G015000
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein FAF-like, chloroplastic
Location	chr1: 10633709 .. 10634479 (+)
RNA-Seq Expression	CsaV3_1G015000
Synteny	CsaV3_1G015000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCTGTGGAAGCCTGCAACACATTTTTGAAAACCCATTACCCGAAAATTCAACTCTCTTTGAACACCTCTCATCATGGAACCAGATAATGCCCTTGAAGCCGACCGAACCATCGTCATTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTCGTTCCCCATTCTTTTTCATCATTGTCGTCTTTGACAGAATCATCGAACTCTCCATCCGCTGTTGATGACATATGGAAAGAACCATCGTCAAATGGTGAACGTGAACCATCCAGCTTCCATAGGAAAAGCAATAGCTTCTCGTCGACCAATTCCGAAAGCTTGCAACTTTGCACAGAAGGGCTTGGATATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGTGATGGATGAAAAGGAATGGCAGGAGGATGAAGAGGAAAGGACCTTAAAAAAACAGATTAATTATCCAAATTTGAAGCCTGGAATGATTAACAGGACAAAATTAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGAAAGCCTTGGGTAGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTGAGAGTTCCCACCCACGAATTTCTACATGCTTCCAGAGAAAATGGACGTTTGAAACTGCATATTCTTGTACCAAATGAGCAGACCAGAGAAGGTGAGGATGAGGCCGACGACAACAACAAGAACTGTGAAAATACTATTGGGAAATGTAAGGTTGAAACTAGGCCATGA

mRNA sequence

ATGGCTGCCTGTGGAAGCCTGCAACACATTTTTGAAAACCCATTACCCGAAAATTCAACTCTCTTTGAACACCTCTCATCATGGAACCAGATAATGCCCTTGAAGCCGACCGAACCATCGTCATTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTCGTTCCCCATTCTTTTTCATCATTGTCGTCTTTGACAGAATCATCGAACTCTCCATCCGCTGTTGATGACATATGGAAAGAACCATCGTCAAATGGTGAACGTGAACCATCCAGCTTCCATAGGAAAAGCAATAGCTTCTCGTCGACCAATTCCGAAAGCTTGCAACTTTGCACAGAAGGGCTTGGATATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGTGATGGATGAAAAGGAATGGCAGGAGGATGAAGAGGAAAGGACCTTAAAAAAACAGATTAATTATCCAAATTTGAAGCCTGGAATGATTAACAGGACAAAATTAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGAAAGCCTTGGGTAGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTGAGAGTTCCCACCCACGAATTTCTACATGCTTCCAGAGAAAATGGACGTTTGAAACTGCATATTCTTGTACCAAATGAGCAGACCAGAGAAGGTGAGGATGAGGCCGACGACAACAACAAGAACTGTGAAAATACTATTGGGAAATGTAAGGTTGAAACTAGGCCATGA

Coding sequence (CDS)

ATGGCTGCCTGTGGAAGCCTGCAACACATTTTTGAAAACCCATTACCCGAAAATTCAACTCTCTTTGAACACCTCTCATCATGGAACCAGATAATGCCCTTGAAGCCGACCGAACCATCGTCATTTACAGAGATCTTTGGAGAGCTTCATTTCAAAGAGAGTTTCGTTCCCCATTCTTTTTCATCATTGTCGTCTTTGACAGAATCATCGAACTCTCCATCCGCTGTTGATGACATATGGAAAGAACCATCGTCAAATGGTGAACGTGAACCATCCAGCTTCCATAGGAAAAGCAATAGCTTCTCGTCGACCAATTCCGAAAGCTTGCAACTTTGCACAGAAGGGCTTGGATATGAAAGCTTAGATGATGTTGAGGATTTGAAAGGGGTGATGGATGAAAAGGAATGGCAGGAGGATGAAGAGGAAAGGACCTTAAAAAAACAGATTAATTATCCAAATTTGAAGCCTGGAATGATTAACAGGACAAAATTAGCAAATATGGAAGATTTTCCTCCACCAATTTCTTGTATGGGAAAGAGTGGAAAGCCTTGGGTAGGTTTCAAATCTTATAGGTATGGTGGAAGGTTTATATTGAAGGAAGTGAGAGTTCCCACCCACGAATTTCTACATGCTTCCAGAGAAAATGGACGTTTGAAACTGCATATTCTTGTACCAAATGAGCAGACCAGAGAAGGTGAGGATGAGGCCGACGACAACAACAAGAACTGTGAAAATACTATTGGGAAATGTAAGGTTGAAACTAGGCCATGA

Protein sequence

MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSFSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNNKNCENTIGKCKVETRP*

Homology

[Close]

BLAST of CsaV3_1G015000 vs. NCBI nr
Match: XP_004139585.1 (protein FAF-like, chloroplastic [Cucumis sativus] >XP_031739243.1 protein FAF-like, chloroplastic [Cucumis sativus] >KAE8652852.1 hypothetical protein Csa_022731 [Cucumis sativus] >KGN64947.1 hypothetical protein Csa_022859 [Cucumis sativus])

HSP 1 Score: 521.5 bits (1342), Expect = 4.0e-144
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180
           LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS
Sbjct: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180

Query: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN
Sbjct: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240

Query: 241 KNCENTIGKCKVETRP 257
           KNCENTIGKCKVETRP
Sbjct: 241 KNCENTIGKCKVETRP 256

[Close]

BLAST of CsaV3_1G015000 vs. NCBI nr
Match: XP_008461212.1 (PREDICTED: protein FAF-like, chloroplastic [Cucumis melo] >KAA0035517.1 protein FAF-like [Cucumis melo var. makuwa] >TYK31014.1 protein FAF-like [Cucumis melo var. makuwa])

HSP 1 Score: 494.2 bits (1271), Expect = 6.8e-136
Identity = 244/257 (94.94%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPEN TL EHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNS SA DD+WKEP SNGEREPS+FHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSTSAADDLWKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEW-QEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGK 180
           LDDVEDLKGVMDEKEW +EDEEERTLKKQI YPNLKPGMINRTK ANMEDFPPPISCMGK
Sbjct: 121 LDDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPISCMGK 180

Query: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240
           SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN
Sbjct: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240

Query: 241 NKNCENTIGKCKVETRP 257
           ++NCENTIGKCKVETRP
Sbjct: 241 HENCENTIGKCKVETRP 257

[Close]

BLAST of CsaV3_1G015000 vs. NCBI nr
Match: XP_038894576.1 (uncharacterized protein LOC120083094 [Benincasa hispida])

HSP 1 Score: 438.3 bits (1126), Expect = 4.4e-119
Identity = 228/260 (87.69%), Postives = 237/260 (91.15%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPE+ TL E LSSWNQIMPLKPTE SSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPESPTLLETLSSWNQIMPLKPTEQSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPS-SNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYE 120
           SSLSSLTES NSPS  DD+WKEPS SNGERE SSFHRKSNSFSSTNSESLQLCTEGLGYE
Sbjct: 61  SSLSSLTESLNSPS-TDDLWKEPSFSNGERESSSFHRKSNSFSSTNSESLQLCTEGLGYE 120

Query: 121 SLDDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMG 180
           SLDDVEDLK  MDEK WQ EDEEE TLKKQI +P+LKPGMINRTK AN EDFPPPISCMG
Sbjct: 121 SLDDVEDLKEGMDEKVWQREDEEENTLKKQIQHPSLKPGMINRTKSANREDFPPPISCMG 180

Query: 181 KSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADD 240
           K+GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVP+EQTRE ++E D+
Sbjct: 181 KNGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPHEQTREAKEEDDN 240

Query: 241 NN-KNCENTIGKCK-VETRP 257
           NN KNCENTIGKCK  ET P
Sbjct: 241 NNEKNCENTIGKCKEAETSP 259

[Close]

BLAST of CsaV3_1G015000 vs. NCBI nr
Match: KAG6573629.1 (hypothetical protein SDJN03_27516, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352.8 bits (904), Expect = 2.5e-93
Identity = 192/247 (77.73%), Postives = 208/247 (84.21%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTE-PSSFTEIFGELHFKESFVPHS 60
           MAACGSLQHIFE PLPEN TL + LSSW+QI+ + P+E  SSFTEIFGELHFKESFVP  
Sbjct: 1   MAACGSLQHIFEAPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVP-P 60

Query: 61  FSSLSSLTES---SNSPSAVDDI-WKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEG 120
            S   SLTES   S SP+AVD I WKEPSSNG  E SS H +SNSFSSTNSESLQLCTEG
Sbjct: 61  LSPQLSLTESNSPSPSPAAVDIIPWKEPSSNG--ESSSSHGRSNSFSSTNSESLQLCTEG 120

Query: 121 LGYESLDDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPI 180
           LGYESLDD EDLKG MDE+EWQ E+EEE TLKKQI  P  KPGMI RTK AN++DFPPPI
Sbjct: 121 LGYESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPPI 180

Query: 181 SCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGED 240
           SCMG SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTRE ++
Sbjct: 181 SCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREAKE 240

Query: 241 EADDNNK 242
           E DDN +
Sbjct: 241 EDDDNKQ 244

[Close]

BLAST of CsaV3_1G015000 vs. NCBI nr
Match: KAG7012710.1 (hypothetical protein SDJN02_25463, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.1 bits (902), Expect = 4.2e-93
Identity = 192/249 (77.11%), Postives = 208/249 (83.53%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTE-PSSFTEIFGELHFKESFVPHS 60
           MAACGSLQHIFE PLPEN TL + LSSW+QI+ + P+E  SSFTEIFGELHFKESFVP  
Sbjct: 1   MAACGSLQHIFEAPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVP-P 60

Query: 61  FSSLSSLTES-----SNSPSAVDDI-WKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCT 120
            S   SLTES     S SP+AVD I WKEPSSNG  E SS H +SNSFSSTNSESLQLCT
Sbjct: 61  LSPQLSLTESNSPSPSPSPAAVDIIPWKEPSSNG--ESSSSHGRSNSFSSTNSESLQLCT 120

Query: 121 EGLGYESLDDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPP 180
           EGLGYESLDD EDLKG MDE+EWQ E+EEE TLKKQI  P  KPGMI RTK AN++DFPP
Sbjct: 121 EGLGYESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPP 180

Query: 181 PISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREG 240
           PISCMG SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTRE 
Sbjct: 181 PISCMGNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTREA 240

Query: 241 EDEADDNNK 242
           ++E DDN +
Sbjct: 241 KEEDDDNKQ 246

[Close]

BLAST of CsaV3_1G015000 vs. ExPASy Swiss-Prot
Match: Q6NMR8 (Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.6e-07
Identity = 53/182 (29.12%), Postives = 86/182 (47.25%), Query Frame = 0


Query: 60  FSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYE 119
           +SSL SL+  S+S +       + +++ E+E S + ++ +S  + + +SL LCTE LG E
Sbjct: 71  WSSLQSLSSGSSSST-------KTTTSSEKESSYYVQRPSSCRALSDQSLALCTENLGSE 130

Query: 120 SLDDVEDLK-----GVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPI 179
           S  DV D+       V  +   +   E RTLK             +R +  +  D PPP+
Sbjct: 131 SGSDVTDIDELFSLDVQTKNLGETTTETRTLK-------------SRKRSVSPSDLPPPL 190

Query: 180 SCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHE-FLHASRENGRLKLHILVPNEQTREGE 236
           + M   G   +  + +R  GR ++     P       A R NGRL+L IL  + +  E E
Sbjct: 191 TTM--RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRLSILKDSNEFVENE 230

[Close]

BLAST of CsaV3_1G015000 vs. ExPASy Swiss-Prot
Match: Q9SFG6 (Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana OX=3702 GN=FAF4 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.9e-05
Identity = 54/208 (25.96%), Postives = 95/208 (45.67%), Query Frame = 0


Query: 56  VPHSFSSLSSLTE-SSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTE 115
           +P S  + SS ++ +S S S ++ +    S++ E++     +  +S  + + ESL LCTE
Sbjct: 59  LPSSSPNPSSNSDTNSGSWSFLESLSNSSSNDKEKKTLPLFQSPSSRRTLSDESLALCTE 118

Query: 116 GLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPI 175
            LG E+  D      ++ E  +    E +T++ +       P   +R K   M   PPP+
Sbjct: 119 SLGSETGSD------IIHEDMFSISSELQTMETRTTSTTSNPSRQDR-KRNTMASLPPPL 178

Query: 176 SCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPN-------- 235
           + M   G   +  KS+R  GR ++   R P        R NG ++L IL+ +        
Sbjct: 179 TSM--IGFDCIEVKSHRENGRLVMMATRPPPRNRCLQDRSNGCVRLAILIDSDDHIETET 238

Query: 236 -EQTREGEDEADDNNKNCENTIGKCKVE 254
            E+  E E+E  +  ++ E  I + K E
Sbjct: 239 KEEKEEEEEETIETVRDNEEEIPEYKEE 257

[Close]

BLAST of CsaV3_1G015000 vs. ExPASy Swiss-Prot
Match: Q0V865 (Protein FAF-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g22090 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 48/185 (25.95%), Postives = 75/185 (40.54%), Query Frame = 0


Query: 78  DIW--------KEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYESLDDVEDLKG 137
           D+W        K  SS     P   H      SS + +SL++CTE LG E+  D      
Sbjct: 110 DVWSSILSEKKKTESSKDTVPPPYVHPLMKRASSLSEKSLEICTESLGSETGCDGFSSHA 169

Query: 138 VMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMED----------------FPPP 197
             +  + + +  + T    +N    K   I  T++   ++                FPPP
Sbjct: 170 SSETGDAEIEIHDET-NLVVNVTETKVEEITETEIVVEQESSIIVPNHIIELPPGSFPPP 229

Query: 198 ISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHIL-VPNEQTREG 238
           I  +       +  K+ R  GR +L+ V +P+H    A R++GRL L    + NE   + 
Sbjct: 230 IRSLSSQSGSSLHMKTRRDNGRLVLEAVSMPSHNNFSAKRQDGRLLLTFAEISNEPNYDK 289

[Close]

BLAST of CsaV3_1G015000 vs. ExPASy TrEMBL
Match: A0A0A0LVU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G166760 PE=3 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 1.9e-144
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180
           LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS
Sbjct: 121 LDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKS 180

Query: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240
           GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN
Sbjct: 181 GKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDNN 240

Query: 241 KNCENTIGKCKVETRP 257
           KNCENTIGKCKVETRP
Sbjct: 241 KNCENTIGKCKVETRP 256

[Close]

BLAST of CsaV3_1G015000 vs. ExPASy TrEMBL
Match: A0A5A7T1P9 (Protein FAF-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002630 PE=3 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.3e-136
Identity = 244/257 (94.94%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPEN TL EHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNS SA DD+WKEP SNGEREPS+FHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSTSAADDLWKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEW-QEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGK 180
           LDDVEDLKGVMDEKEW +EDEEERTLKKQI YPNLKPGMINRTK ANMEDFPPPISCMGK
Sbjct: 121 LDDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPISCMGK 180

Query: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240
           SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN
Sbjct: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240

Query: 241 NKNCENTIGKCKVETRP 257
           ++NCENTIGKCKVETRP
Sbjct: 241 HENCENTIGKCKVETRP 257

[Close]

BLAST of CsaV3_1G015000 vs. ExPASy TrEMBL
Match: A0A1S3CEL7 (protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499860 PE=3 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.3e-136
Identity = 244/257 (94.94%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60
           MAACGSLQHIFENPLPEN TL EHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF
Sbjct: 1   MAACGSLQHIFENPLPENPTLLEHLSSWNQIMPLKPTEPSSFTEIFGELHFKESFVPHSF 60

Query: 61  SSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYES 120
           SSLSSLTESSNS SA DD+WKEP SNGEREPS+FHRKSNSFSSTNSESLQLCTEGLGYES
Sbjct: 61  SSLSSLTESSNSTSAADDLWKEPLSNGEREPSNFHRKSNSFSSTNSESLQLCTEGLGYES 120

Query: 121 LDDVEDLKGVMDEKEW-QEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGK 180
           LDDVEDLKGVMDEKEW +EDEEERTLKKQI YPNLKPGMINRTK ANMEDFPPPISCMGK
Sbjct: 121 LDDVEDLKGVMDEKEWPKEDEEERTLKKQIQYPNLKPGMINRTKSANMEDFPPPISCMGK 180

Query: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240
           SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN
Sbjct: 181 SGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEADDN 240

Query: 241 NKNCENTIGKCKVETRP 257
           ++NCENTIGKCKVETRP
Sbjct: 241 HENCENTIGKCKVETRP 257

[Close]

BLAST of CsaV3_1G015000 vs. ExPASy TrEMBL
Match: A0A6J1G079 (uncharacterized protein LOC111449517 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449517 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.7e-92
Identity = 185/244 (75.82%), Postives = 203/244 (83.20%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTE-PSSFTEIFGELHFKESFVPHS 60
           MAACGSLQHIFE PLPEN TL + LSSW+QI+ + P+E  SSFTEIFGELHFKESFVP  
Sbjct: 73  MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVPPL 132

Query: 61  FSSLSSLTESSNSPSAVDDI-WKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGY 120
              LS    +S SP+AV  I WKEP SNG  E SS H +SNSFSSTNSESLQLCTEGLGY
Sbjct: 133 SPQLSLTESNSPSPAAVGIIPWKEPLSNG--ESSSSHGRSNSFSSTNSESLQLCTEGLGY 192

Query: 121 ESLDDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCM 180
           ESLDD EDLKG MDE+EWQ E+EEE TLKKQI  P  KPGMI RTK AN++DFPPPISCM
Sbjct: 193 ESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPPISCM 252

Query: 181 GKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEAD 240
           G SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTR+ ++E D
Sbjct: 253 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTRDAKEEDD 312

Query: 241 DNNK 242
           DN +
Sbjct: 313 DNKQ 314

[Close]

BLAST of CsaV3_1G015000 vs. ExPASy TrEMBL
Match: A0A6J1G0A0 (uncharacterized protein LOC111449517 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449517 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.7e-92
Identity = 185/244 (75.82%), Postives = 203/244 (83.20%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENSTLFEHLSSWNQIMPLKPTE-PSSFTEIFGELHFKESFVPHS 60
           MAACGSLQHIFE PLPEN TL + LSSW+QI+ + P+E  SSFTEIFGELHFKESFVP  
Sbjct: 73  MAACGSLQHIFETPLPENPTLLDTLSSWSQIIAVTPSEQQSSFTEIFGELHFKESFVPPL 132

Query: 61  FSSLSSLTESSNSPSAVDDI-WKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGY 120
              LS    +S SP+AV  I WKEP SNG  E SS H +SNSFSSTNSESLQLCTEGLGY
Sbjct: 133 SPQLSLTESNSPSPAAVGIIPWKEPLSNG--ESSSSHGRSNSFSSTNSESLQLCTEGLGY 192

Query: 121 ESLDDVEDLKGVMDEKEWQ-EDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCM 180
           ESLDD EDLKG MDE+EWQ E+EEE TLKKQI  P  KPGMI RTK AN++DFPPPISCM
Sbjct: 193 ESLDDGEDLKGGMDEEEWQREEEEEETLKKQIQNPIWKPGMIKRTKSANVDDFPPPISCM 252

Query: 181 GKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTREGEDEAD 240
           G SGKPWVGFKSYRYGGRFILKE+RVPTHEFLHASRENGRLKLHILVPN+QTR+ ++E D
Sbjct: 253 GNSGKPWVGFKSYRYGGRFILKEIRVPTHEFLHASRENGRLKLHILVPNKQTRDAKEEDD 312

Query: 241 DNNK 242
           DN +
Sbjct: 313 DNKQ 314

[Close]

BLAST of CsaV3_1G015000 vs. TAIR 10
Match: AT5G22390.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 98.6 bits (244), Expect = 7.8e-21
Identity = 88/252 (34.92%), Postives = 121/252 (48.02%), Query Frame = 0


Query: 1   MAACGSLQHIFENPLPENS--TLFEHLSS---WNQIMPLKPT-----EPSSFTEIFGELH 60
           MAA GS   IF+NP  +NS  +  + LSS   WN    L  T      P  FTEIFGELH
Sbjct: 1   MAAYGSFHRIFDNPRQDNSPKSFLDTLSSSSPWNPSKGLHVTTHHDETPPPFTEIFGELH 60

Query: 61  FKESFVPHSFSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQ 120
           F+ES                                     SS+ +     +S  + SLQ
Sbjct: 61  FRES-----------------------------------SHSSYEK-----TSAENSSLQ 120

Query: 121 LCTEGLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDF 180
           LCTEGLG ES   +ED K V  + +  +DE E  +K + N  N +     R K    +++
Sbjct: 121 LCTEGLGSESYYGLEDEK-VNGDGDGDDDEIE--VKGKDNGSNDEEEWEPRRK--ERKEY 180

Query: 181 PPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPNEQTR 240
           PP ++ M         FK+YR  GR +L+EVR+P  EFL ASRE+GRL+L ++ P +   
Sbjct: 181 PPAMTRM--------SFKTYRKEGRLVLEEVRIPRREFLRASREDGRLRLKLVQPEDD-- 195

Query: 241 EGEDEADDNNKN 243
              DE ++N K+
Sbjct: 241 --HDEEEENEKD 195

[Close]

BLAST of CsaV3_1G015000 vs. TAIR 10
Match: AT1G54740.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 58.9 bits (141), Expect = 6.8e-09
Identity = 42/126 (33.33%), Postives = 58/126 (46.03%), Query Frame = 0


Query: 104 TNSESLQLCTEGLGYESLD------DVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPG 163
           T S  L LCTE LG+ES D      +VE+      E E +  E +R   K+         
Sbjct: 31  TQSHGLMLCTEYLGFESYDMRMSDNEVENKMTCHAEVETERVEAKRRKTKE--------- 90

Query: 164 MINRTKLANMEDFPPPISCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGR 223
             N    A  + FPPP+S +   G+ +   +  R  GR  L +V V   E  H SR +GR
Sbjct: 91  --NVVVQAQKKQFPPPLSSLNSRGQRYFYLRPVRKDGRLELTQVMVDRPEIFHVSRVDGR 145

[Close]

BLAST of CsaV3_1G015000 vs. TAIR 10
Match: AT5G19260.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 53/182 (29.12%), Postives = 86/182 (47.25%), Query Frame = 0


Query: 60  FSSLSSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYE 119
           +SSL SL+  S+S +       + +++ E+E S + ++ +S  + + +SL LCTE LG E
Sbjct: 71  WSSLQSLSSGSSSST-------KTTTSSEKESSYYVQRPSSCRALSDQSLALCTENLGSE 130

Query: 120 SLDDVEDLK-----GVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPI 179
           S  DV D+       V  +   +   E RTLK             +R +  +  D PPP+
Sbjct: 131 SGSDVTDIDELFSLDVQTKNLGETTTETRTLK-------------SRKRSVSPSDLPPPL 190

Query: 180 SCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHE-FLHASRENGRLKLHILVPNEQTREGE 236
           + M   G   +  + +R  GR ++     P       A R NGRL+L IL  + +  E E
Sbjct: 191 TTM--RGFQCIQMRPHRENGRLVMTATNAPPRNGCFQADRSNGRLRLSILKDSNEFVENE 230

[Close]

BLAST of CsaV3_1G015000 vs. TAIR 10
Match: AT3G06020.1 (Protein of unknown function (DUF3049) )

HSP 1 Score: 48.9 bits (115), Expect = 7.1e-06
Identity = 54/208 (25.96%), Postives = 95/208 (45.67%), Query Frame = 0


Query: 56  VPHSFSSLSSLTE-SSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTE 115
           +P S  + SS ++ +S S S ++ +    S++ E++     +  +S  + + ESL LCTE
Sbjct: 59  LPSSSPNPSSNSDTNSGSWSFLESLSNSSSNDKEKKTLPLFQSPSSRRTLSDESLALCTE 118

Query: 116 GLGYESLDDVEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPI 175
            LG E+  D      ++ E  +    E +T++ +       P   +R K   M   PPP+
Sbjct: 119 SLGSETGSD------IIHEDMFSISSELQTMETRTTSTTSNPSRQDR-KRNTMASLPPPL 178

Query: 176 SCMGKSGKPWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHILVPN-------- 235
           + M   G   +  KS+R  GR ++   R P        R NG ++L IL+ +        
Sbjct: 179 TSM--IGFDCIEVKSHRENGRLVMMATRPPPRNRCLQDRSNGCVRLAILIDSDDHIETET 238

Query: 236 -EQTREGEDEADDNNKNCENTIGKCKVE 254
            E+  E E+E  +  ++ E  I + K E
Sbjct: 239 KEEKEEEEEETIETVRDNEEEIPEYKEE 257

[Close]

BLAST of CsaV3_1G015000 vs. TAIR 10
Match: AT1G22110.1 (structural constituent of ribosome )

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05
Identity = 54/196 (27.55%), Postives = 89/196 (45.41%), Query Frame = 0


Query: 64  SSLTESSNSPSAVDDIWKEPSSNGEREPSSFHRKSNSFSSTNSESLQLCTEGLGYESLDD 123
           SS ++SS+S ++  D     S +   + +S    S+  S T+S S     + +G ES  D
Sbjct: 5   SSSSDSSSSMASSSD----QSLSINSDQTSPFVTSSMLSRTSSSSSSAVGDYIGTESCFD 64

Query: 124 VEDLKGVMDEKEWQEDEEERTLKKQINYPNLKPGMINRTKLANMEDFPPPISCMGKSGK- 183
           +       DE           +K +  Y   +       + A   +FPPPI  + ++G  
Sbjct: 65  ILS----ADEGNDVVSVASEPVKSRFRYGGRRREE-REARAAAAREFPPPIPLLAQTGNL 124

Query: 184 ----PWVGFKSYRYGGRFILKEVRVPTHEFLHASRENGRLKLHIL--------VPNEQTR 243
               PWV  +     GR IL+E +V  HE+  A+R NGRL LH++        +P E + 
Sbjct: 125 LPHMPWVLKRVVTSDGRLILREEKVRHHEYFRANRSNGRLTLHLVPLDDDVFDLPQEPSH 184

Query: 244 -EGEDEADDNNKNCEN 246
            + +DE DD+  + E+
Sbjct: 185 YQSDDEEDDDECDDED 191

The following BLAST results are available for this feature:

BLAST of CsaV3_1G015000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139585.1	4.0e-144	100.00	protein FAF-like, chloroplastic [Cucumis sativus] >XP_031739243.1 protein FAF-li...	[more]
XP_008461212.1	6.8e-136	94.94	PREDICTED: protein FAF-like, chloroplastic [Cucumis melo] >KAA0035517.1 protein ...	[more]
XP_038894576.1	4.4e-119	87.69	uncharacterized protein LOC120083094 [Benincasa hispida]	[more]
KAG6573629.1	2.5e-93	77.73	hypothetical protein SDJN03_27516, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7012710.1	4.2e-93	77.11	hypothetical protein SDJN02_25463, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsaV3_1G015000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NMR8	1.6e-07	29.12	Protein FANTASTIC FOUR 3 OS=Arabidopsis thaliana OX=3702 GN=FAF3 PE=2 SV=1	[more]
Q9SFG6	9.9e-05	25.96	Protein FANTASTIC FOUR 4 OS=Arabidopsis thaliana OX=3702 GN=FAF4 PE=2 SV=1	[more]
Q0V865	1.7e-04	25.95	Protein FAF-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g22090 PE=...	[more]

BLAST of CsaV3_1G015000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVU3	1.9e-144	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G166760 PE=3 SV=1	[more]
A0A5A7T1P9	3.3e-136	94.94	Protein FAF-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002...	[more]
A0A1S3CEL7	3.3e-136	94.94	protein FAF-like, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499860 PE=3 SV=...	[more]
A0A6J1G079	1.7e-92	75.82	uncharacterized protein LOC111449517 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1G0A0	1.7e-92	75.82	uncharacterized protein LOC111449517 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CsaV3_1G015000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22390.1	7.8e-21	34.92	Protein of unknown function (DUF3049)	[more]
AT1G54740.1	6.8e-09	33.33	Protein of unknown function (DUF3049)	[more]
AT5G19260.1	1.2e-08	29.12	Protein of unknown function (DUF3049)	[more]
AT3G06020.1	7.1e-06	25.96	Protein of unknown function (DUF3049)	[more]
AT1G22110.1	1.6e-05	27.55	structural constituent of ribosome	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021410	The fantastic four family	PFAM	PF11250	FAF	coord: 170..221 e-value: 2.2E-20 score: 72.6
IPR021410	The fantastic four family	PANTHER	PTHR33155	FANTASTIC FOUR-LIKE PROTEIN (DUF3049)	coord: 10..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..256
None	No IPR available	PANTHER	PTHR33155:SF9	FANTASTIC FOUR-LIKE PROTEIN (DUF3049)	coord: 10..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G015000.1	CsaV3_1G015000.1	mRNA