CsaV3_1G014980 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G014980
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 10624345 .. 10624581 (-)
RNA-Seq ExpressionCsaV3_1G014980
SyntenyCsaV3_1G014980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAATTTTGAAAGCACACAAAGATCCAAATAATTCATCTAGTGTCAGAGTAGTGATATCATGTGCTTCTTCAATGACCATAACTTTCATATCAAACTTTCTAGGCATTGATCGCAACACCTTTTTGACAAGTTTGGATTTTGGGGTTCCCTCACCAAAATTAAAGGAGTCATTTGCGATTTCGAGAACCCTCACATTATATTCAGTGATGGTCTCTTCTTCCATCATTTTCAAG

mRNA sequence

ATGACAATTTTGAAAGCACACAAAGATCCAAATAATTCATCTAGTGTCAGAGTAGTGATATCATGTGCTTCTTCAATGACCATAACTTTCATATCAAACTTTCTAGGCATTGATCGCAACACCTTTTTGACAAGTTTGGATTTTGGGGTTCCCTCACCAAAATTAAAGGAGTCATTTGCGATTTCGAGAACCCTCACATTATATTCAGTGATGGTCTCTTCTTCCATCATTTTCAAG

Coding sequence (CDS)

ATGACAATTTTGAAAGCACACAAAGATCCAAATAATTCATCTAGTGTCAGAGTAGTGATATCATGTGCTTCTTCAATGACCATAACTTTCATATCAAACTTTCTAGGCATTGATCGCAACACCTTTTTGACAAGTTTGGATTTTGGGGTTCCCTCACCAAAATTAAAGGAGTCATTTGCGATTTCGAGAACCCTCACATTATATTCAGTGATGGTCTCTTCTTCCATCATTTTCAAG

Protein sequence

MTILKAHKDPNNSSSVRVVISCASSMTITFISNFLGIDRNTFLTSLDFGVPSPKLKESFAISRTLTLYSVMVSSSIIFK
Homology
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BLAST of CsaV3_1G014980 vs. NCBI nr
Match: KAE8652811.1 (hypothetical protein Csa_022894, partial [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 1.3e-32
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MTILKAHKDPNNSSSVRVVISCASSMTITFISNFLGIDRNTFLTSLDFGVPSPKLKESFA 60
          MTILKAHKDPNNSSSVRVVISCASSMTITFISNFLGIDRNTFLTSLDFGVPSPKLKESFA
Sbjct: 1  MTILKAHKDPNNSSSVRVVISCASSMTITFISNFLGIDRNTFLTSLDFGVPSPKLKESFA 60

Query: 61 ISRTLTLYSVMVSSSIIFK 80
          ISRTLTLYSVMVSSSIIFK
Sbjct: 61 ISRTLTLYSVMVSSSIIFK 79

The following BLAST results are available for this feature:
BLAST of CsaV3_1G014980 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652811.11.3e-32100.00hypothetical protein Csa_022894, partial [Cucumis sativus][more]
BLAST of CsaV3_1G014980 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G014980 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G014980 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G014980.1CsaV3_1G014980.1mRNA