CsaV3_1G014940 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G014940
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 10601052 .. 10602086 (-)
RNA-Seq ExpressionCsaV3_1G014940
SyntenyCsaV3_1G014940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACTTTCGTTCTCCATCAAGCAGTTACTTAGAGTTTCAGGTATTTACAGGCTAAAGTGAAAAATACTGGCACGGTAATTTAGCTTATAGTACCTAAAGAAAGTGATCACAACACTATTTTCACAAATCATTTGATCCCTTCATCACACATTGTTAGATTAGTAGGTTCAGTCATTAATTTTGTCTTGTATATGGTTAAAATTTGCATTACCTTCGTCTGAATCTTGCTGATATTACTTACAATATTCTCAATCTTCTCCACAGCATTCAAATGGTGGAGAATCATTTTGTATGTTCATTGAAGCTAGCAAGTAACTCTCAATGTTCTATTTTAGATTTTCAATCTCCTTATCAAACTGGAAGAAAGAGAATCGTTTTGTTTGTTGAGGTTTCTTGCCTCTGAGAAATGACACCATTATCAAATCAAATCCAGTTTTGTTCTACATTATGTTGGACTAAAAATTTTACAGGGGTATTCTGTCTCCTGCAGGCATCTTCCCCAAGTCTCAGGTGCTTTACTTTTGCTATTAATGCCCTCTGCTTGCTAAATCTTAAAGAGAAACAAGGTCAGTTTAGATTGTGAACTTTTTATAATATCAATATCCTGTTTTGATAAGGTAGGAGTTAGGAATTGCTTACAATCTTATATGACATGTTTGGAAGTACTGATTTGATCATTTTGAAAAACATTCAAAATTAGTTTTATTATATGAAAATTGCAACTAAAAGTATTAATTAAACATTGAATTAATTCCAAGCCATTAGAGCCCATTGCGACATAGAGTGATTCTAAACATGACAATATTGATTGCAATCATTTCAAAACCATTCATGAACATGCTTTTGTTAGGAACCAAGATAGATATGGCTACCTTTGCCCCACATCAGATGATCAATGTGGTATATTTAAGTGGTTTGGCTCTATCACTCCAATAACTCGTTTTTGGGGTGTGGTTTTTCATAGTAGTTAACTACCTAACAGCTTTTTGTTTTACTGATAGTAAACTGCGGCCTTCCCTTATGTGTATGA

mRNA sequence

ATGGACAACTTTCGTTCTCCATCAAGCAGTTACTTAGAGTTTCAGGCATCTTCCCCAAGTCTCAGGTGCTTTACTTTTGCTATTAATGCCCTCTGCTTGCTAAATCTTAAAGAGAAACAAGTAAACTGCGGCCTTCCCTTATGTGTATGA

Coding sequence (CDS)

ATGGACAACTTTCGTTCTCCATCAAGCAGTTACTTAGAGTTTCAGGCATCTTCCCCAAGTCTCAGGTGCTTTACTTTTGCTATTAATGCCCTCTGCTTGCTAAATCTTAAAGAGAAACAAGTAAACTGCGGCCTTCCCTTATGTGTATGA

Protein sequence

MDNFRSPSSSYLEFQASSPSLRCFTFAINALCLLNLKEKQVNCGLPLCV*
Homology
[Close]
BLAST of CsaV3_1G014940 vs. NCBI nr
Match: KGN64942.1 (hypothetical protein Csa_022807 [Cucumis sativus])

HSP 1 Score: 103.6 bits (257), Expect = 5.0e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MDNFRSPSSSYLEFQASSPSLRCFTFAINALCLLNLKEKQVNCGLPLCV 50
          MDNFRSPSSSYLEFQASSPSLRCFTFAINALCLLNLKEKQVNCGLPLCV
Sbjct: 1  MDNFRSPSSSYLEFQASSPSLRCFTFAINALCLLNLKEKQVNCGLPLCV 49

[Close]
BLAST of CsaV3_1G014940 vs. ExPASy TrEMBL
Match: A0A0A0LVT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165740 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.4e-19
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MDNFRSPSSSYLEFQASSPSLRCFTFAINALCLLNLKEKQVNCGLPLCV 50
          MDNFRSPSSSYLEFQASSPSLRCFTFAINALCLLNLKEKQVNCGLPLCV
Sbjct: 1  MDNFRSPSSSYLEFQASSPSLRCFTFAINALCLLNLKEKQVNCGLPLCV 49

The following BLAST results are available for this feature:
BLAST of CsaV3_1G014940 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64942.15.0e-19100.00hypothetical protein Csa_022807 [Cucumis sativus][more]
BLAST of CsaV3_1G014940 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G014940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVT72.4e-19100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165740 PE=4 SV=1[more]
BLAST of CsaV3_1G014940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G014940.1CsaV3_1G014940.1mRNA