CsaV3_1G014880 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G014880
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 10533885 .. 10534097 (+)
RNA-Seq ExpressionCsaV3_1G014880
SyntenyCsaV3_1G014880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAGACTTCCACGACGGCGTCGTGCAGTCGCCGCCAGCGTTTATCTTCTTTGTCTTGTTCTCGCAACGTTTCTATCCTTTTCGACGAGTTTCAGCGGTAGTCCACTCTCGGATTGGTCTCAATTCACTTTACCCCCTATCATAGCATGCGTTTCTGCAAGTTTGAACACTTTCGAACACCAACCATCTTATCAGAGTCCATTTGGGTAA

mRNA sequence

ATGGCGAGACTTCCACGACGGCGTCGTGCAGTCGCCGCCAGCGTTTATCTTCTTTGTCTTGTTCTCGCAACGTTTCTATCCTTTTCGACGAGTTTCAGCGGTAGTCCACTCTCGGATTGGTCTCAATTCACTTTACCCCCTATCATAGCATGCGTTTCTGCAAGTTTGAACACTTTCGAACACCAACCATCTTATCAGAGTCCATTTGGGTAA

Coding sequence (CDS)

ATGGCGAGACTTCCACGACGGCGTCGTGCAGTCGCCGCCAGCGTTTATCTTCTTTGTCTTGTTCTCGCAACGTTTCTATCCTTTTCGACGAGTTTCAGCGGTAGTCCACTCTCGGATTGGTCTCAATTCACTTTACCCCCTATCATAGCATGCGTTTCTGCAAGTTTGAACACTTTCGAACACCAACCATCTTATCAGAGTCCATTTGGGTAA

Protein sequence

MARLPRRRRAVAASVYLLCLVLATFLSFSTSFSGSPLSDWSQFTLPPIIACVSASLNTFEHQPSYQSPFG*
Homology
[Close]
BLAST of CsaV3_1G014880 vs. NCBI nr
Match: KGN64936.1 (hypothetical protein Csa_022734 [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 5.3e-30
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 1  MARLPRRRRAVAASVYLLCLVLATFLSFSTSFSGSPLSDWSQFTLPPIIACVSASLNTFE 60
          MARLPRRRRAVAASVYLLCLVLATFLSFSTSFSGSPLSDWSQFTLPPIIACVSASLNTFE
Sbjct: 1  MARLPRRRRAVAASVYLLCLVLATFLSFSTSFSGSPLSDWSQFTLPPIIACVSASLNTFE 60

Query: 61 HQPSYQSPFG 71
          HQPSYQSPFG
Sbjct: 61 HQPSYQSPFG 70

[Close]
BLAST of CsaV3_1G014880 vs. ExPASy TrEMBL
Match: A0A0A0LY95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G164700 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.6e-30
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 1  MARLPRRRRAVAASVYLLCLVLATFLSFSTSFSGSPLSDWSQFTLPPIIACVSASLNTFE 60
          MARLPRRRRAVAASVYLLCLVLATFLSFSTSFSGSPLSDWSQFTLPPIIACVSASLNTFE
Sbjct: 1  MARLPRRRRAVAASVYLLCLVLATFLSFSTSFSGSPLSDWSQFTLPPIIACVSASLNTFE 60

Query: 61 HQPSYQSPFG 71
          HQPSYQSPFG
Sbjct: 61 HQPSYQSPFG 70

The following BLAST results are available for this feature:
BLAST of CsaV3_1G014880 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64936.15.3e-30100.00hypothetical protein Csa_022734 [Cucumis sativus][more]
BLAST of CsaV3_1G014880 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G014880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY952.6e-30100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G164700 PE=4 SV=1[more]
BLAST of CsaV3_1G014880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G014880.1CsaV3_1G014880.1mRNA