CsaV3_1G014680 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G014680
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 10236083 .. 10236416 (+)
RNA-Seq ExpressionCsaV3_1G014680
SyntenyCsaV3_1G014680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGAGCATGGACTGAGAGCAAAGGGAACTGAAGCGAAGTGTAGCGGATCTAGATGGGAGCAGAGGAATGAAGCAGCGCGGAAATGGGCGAGTAAAATCGGAGTGGAGCAAGGTTGATATACAGAGCGTCATGGAATTCGTTAGATCTGATTTGAGCAAGTCGAGCAGTTAGATTTGTAAAGGGTGAAAGGGATTGAGTGGTCAGCATGGTCTAGTACGGATAAGTGTTGGTAGAGGGTGGTCGAATGGCCACTTGGGGATGATGGAGGAGCGATGGCTAAGTCAAAACTTGGGGCTATCATACTACCTGGGTTTGTATTTTAGTGATTGA

mRNA sequence

ATGTCGGAGCATGGACTGAGAGCAAAGGGAACTGAAGCGAAGTGTAGCGGATCTAGATGGGAGCAGAGGAATGAAGCAGCGCGGAAATGGGCGAGTAAAATCGGAGTGGAGCAAGTACGGATAAGTGTTGGTAGAGGGTGGTCGAATGGCCACTTGGGGATGATGGAGGAGCGATGGCTAAGTCAAAACTTGGGGCTATCATACTACCTGGGTTTGTATTTTAGTGATTGA

Coding sequence (CDS)

ATGTCGGAGCATGGACTGAGAGCAAAGGGAACTGAAGCGAAGTGTAGCGGATCTAGATGGGAGCAGAGGAATGAAGCAGCGCGGAAATGGGCGAGTAAAATCGGAGTGGAGCAAGTACGGATAAGTGTTGGTAGAGGGTGGTCGAATGGCCACTTGGGGATGATGGAGGAGCGATGGCTAAGTCAAAACTTGGGGCTATCATACTACCTGGGTTTGTATTTTAGTGATTGA

Protein sequence

MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWLSQNLGLSYYLGLYFSD*
Homology
[Close]
BLAST of CsaV3_1G014680 vs. NCBI nr
Match: KGN64914.1 (hypothetical protein Csa_022706 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 9.1e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL 60
          MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL
Sbjct: 1  MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL 60

Query: 61 SQNLGLSYYLGLYFSD 77
          SQNLGLSYYLGLYFSD
Sbjct: 61 SQNLGLSYYLGLYFSD 76

[Close]
BLAST of CsaV3_1G014680 vs. ExPASy TrEMBL
Match: A0A0A0LVD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G154080 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.4e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL 60
          MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL
Sbjct: 1  MSEHGLRAKGTEAKCSGSRWEQRNEAARKWASKIGVEQVRISVGRGWSNGHLGMMEERWL 60

Query: 61 SQNLGLSYYLGLYFSD 77
          SQNLGLSYYLGLYFSD
Sbjct: 61 SQNLGLSYYLGLYFSD 76

The following BLAST results are available for this feature:
BLAST of CsaV3_1G014680 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64914.19.1e-36100.00hypothetical protein Csa_022706 [Cucumis sativus][more]
BLAST of CsaV3_1G014680 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G014680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVD04.4e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G154080 PE=4 SV=1[more]
BLAST of CsaV3_1G014680 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G014680.1CsaV3_1G014680.1mRNA