CsaV3_1G014590 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G014590
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	50S ribosomal protein L22, chloroplastic
Location	chr1: 10135056 .. 10144980 (+)
RNA-Seq Expression	CsaV3_1G014590
Synteny	CsaV3_1G014590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCGAAGTATAGAAAATATGATATATTTTTTTAAAATTAAAAATTCATTTTAAACCTAATGTAAACAGTTCTATGTGGGTTGCTCATTCCCTCGCCTTCTCTCCCTCTTCCGGCTGATCTCCCTCCCTCAACCTCCCCGCCGTCGACCCTTCCGCCACCCACTCTCTTTGACGACGCCTCCTCAGCCTCCCTCTAGTTCCTTCTGATTTGAAATATTCCCGAATTCAATTTCCTAGCGGAGGGTGAGTTTTTTTTTTTTTTTTTTTTTTTTTGTTGCAATGTGGAGTGAGCTGCTGCAGTTTTGATTATGTGTTGAATTTTTTCTTTTTCCCGTTGAGTTCTTAAAATTGACGGAGTCTTGAACTGAGGTGAATGCTGTGATAGGAGACGAAAGTGTGGATTTTGTTGTAATAGGAAGTGAAGTGATGGGGTCCTCTTATCTGTAGTTTCTTGTATTGGATTTTTAAGTTGTCTGTTAGGGAATTGACTATGTTCACCAATTGATGATCATGTTTTCTTTTCTTTTGGTTTTCAGGACTTCATTTCTTTGGTGATTTTTCATTCGACCAAGCAATTTCGTTGTCATGGTTGGTTGGCAGAGATGTTTACGGTCCATGCTTGGCCATTTGCAAAACAAAGTGGAATTGAGTTACAATGCAGCTTCCAACTCTAGTTATCGTTTGCAATCTTCTCTTTCAAATGGTCAGTTATATTTTCTTCCGATTGAACGTATGAATCGCACAACACTTTCCTCTAGCCCATTCAAACTCTAGTTTTCATCTAAGTTTTTTTTTTTAAAAAAATATTTACTAGTGTTTGTGGTTTTTTATGAGGTGCATGCTTGGATTAGTTAGTCTCATGCTTTTTACTCTTGCACTAACTACTAAGGCAATTTAATTCCTAAATTTTTGAATTTCCTTCAACCAAACTTTTACCTTAAATCAGTTGGAATTATTTTGAGATACAACTTGATGCTTTTTGGAACTAACTTTTTTTTTTTTTTTTTTTTTTGGTTTTATTCTTGAAGTTGCCATTGGGCCCTTTTTAATACTTTTTGTTATACCTCCCAAAATCATTGAGGTATGGATATTGTTTTGATGAAGTATGGAATGACCTTAACTCTTTCAATCTACTTCAAAGTTGTTCTTAAAAGTTCAAAGTGGAGAAAAAACAAAGCAGGTTGTTTTTCAAAACAAACGACCTGATAAGCAAATAATTGGCATTGATTAGCTAAAGCATAGGACGCTTAACTTTCAAGCTAAGCTTTCCAATAAACTTGAAGAGTTGCAACGCTTGGAACTTCAAAAGTTATTTGGATCCTAAAAGTCATAATGAATCTAGAAACTCAGATTCATTCAAATATTTAATGAATTATGTACTTATTTAATGTCACGTGTTCTCATTAGTTATAGTAGTTGAAAGGGCATAAAATTAAATGATGTGTTCTTTCAATTTAAATTTTAAATTAATATAAATAGGGTTGTAGTTTCCACATTTTAGGAAGAGTATCAATATTGAAAAACTTTTTTTTATTCAACCCTTTTCATGTTAAAAATCAATTTATTGGATTAGTCTTGATCAAGCTAATCTTGCAATGAGTTGTCTTAGGATCTAAAAGTGACCATCATAGATTTTAGGTTTGATTCAAGTTAGCATGTGAGTTTTTGCAAGGATCCTAGAAGGACCTCTAGCTTTGCATCTAACAAACATAGTGGGTGCTTATCATGACCCTTTGATTCAGACATTGTGAAAACCTTTCTCTCAGTGCTCTTCCCCCTCTCCCCCCATTCATAGCAGGTGGCCTTGGCCGATCGCCACTCTCTTCTCCTACCCCTGCCTCTGACCACCCTCTCATCTCTGTTCATTATGGTTCAACATATGCAAGAAGATCCTGGCCATTGGCCTCAAAGCTTTCTCCATTGAGGATGAAGCTAGTAATGGGAATCATGCCTGCATCATAGGTGATAGGACTTAAGAAGCATGCAATCTTCGCTCATCAACTCCCCCATTGGTGGATGTTGTGGAGGTCTTATAGACATTTCTAAGAAACCTCATAGACATCCTACCTTTTCCATACTCTATGACATTGTTCTAAATTGGGTCCTTCCTTTCGATTGGCTTAAATACCCTTTCTCTTCTCTCTAGCCATCTTATAAGCTAAAGGTTTCAGTCTGAATTGGAAAACACTTTGGATTAACTTTGAAGAAGTAGCATCCCTTAGTGGGCCTCTTCTGCTGTATTCTTTTTTTGGAATGTGGAGGGAGACATGGATCACATGCTTTAATGTTGTGGATTTGTGGTGTTTTTGTAGAATGTCTTTTCCTAGGAGTTCGGTTTAGAGTAGTATTGGAGACTCAATTTATGATTCCTTCCCCATTCATCTTTTAGGAAGAATGGTCATTTTTTATGGTTTGAGGGGGTATGTGCTCTGTTATGGGGTCCTTGGGGGAGAGAAATAACAAAGCTTTTAGAGTTGCTGTGAGGGACTATAATGATGTTTGGTTCTTGGTGAGTTTTCATTGTTTTCTTTGAGCCTTGATTCCAAAGATTTTTTGTAAGTACTCTACACACAATATTTACCTGGTTGGAATCTCTTTAGTCTTTCTACAGTAGGATTTCCGGAGAATGACTGTTTCTGCAAAGTTTGGCTCCAAGGCTTTAAATAAGCACCGGGCACTGCTTCTCTCCACAAAAGTCGAGGCCCAAGGAAGAACATTATGAAACAAGCAACAGTCCTTAATCCATGATATTGTATTATCCAAAGTTGAGAATGGGGCTACTACAATATTTTGGCGTGATCAGTACTTCAAGGAAGCTTTTTGTTTAATAACTTCCTCTTGCTCTCCAGCAGAAAGATGGCTTCTGCCAAAGATTTATGGAGGGTTGATTTGGCTTTCTAGTATCTAGATTTCGTTTGAAATTTGAGTTACTAAGAAGTTCCTGAATGGGTTGAGTTGAGCCTTTTATTATTCAAACTCTGTTTAGCCAATAAGGATGACATGTGTGTGTGTCCTCTTGGAAAATATGGGGTCATTTTCATGAAAGCATTACTACGAAGTTTTGATCATTCCTCAATGTGTGATTTTCTTCTATTCAATAAAGCTATTTGGTATAATATCTTTCATTTTATTTCAATGAAAGCTTTACTTTTAGTTGTACATGAAGGTCATTGTGCATAATGTTTACCTGAAAAAGATAGAATTCTAATTTATTCTTTGGGAGCTATATCACAGGGAAATAAACAAATATGATAGGCGTTCAAATCATCTCCTTGACACAACTCTTTCCCCAAATCAATGCATCCTTTAGAAACATGATTCGGAGTCATAGAGCCACATTTTCATAACTTGCCCTTTTTGTTCACAGTTTTTGGAAGGATATGTTGGTGACACTCAATTGGTTGGTGGTCCTTCTAAATGATCCTTCCATTCTTCAAAACCGTTTTCTCTAGGGATATCCTTTTAGAGACGAGAACGAGATCCTATGGAAGAATTTATTTTGTTATTTTTTCTTGTACTTTTCTGTAGTTAGTATGGTTAGAAAGAAATCAAAGGATTTTTGGAACCAAGGAAAGGGTCTATGTGGACTTTTTTGACAATATTCTTTTTTGCCTTTATCGTGCTCTAATTGTAAATTGAATTCTCCTAGTTCTGTCTCTCTTTTGTCCCATTGAAGAAGTTCAATGAAACTTCTTTGGATTCTGTTTTATTCCTCGTCTGTTTTCATTTATCTTAATTTAATTTAAATTTCATACATCTTTGAAATTATTTCTTATATAGAAAAACTTCTGGTTCAAATGTTCAATTTAGCAAATATGAGTTTTTGGGCATTTACTTGGACATCTCCTCCATGGACCACTGCCTCTTTCGTTGGCTGCAAAATTGGTTTTTGGCCTAACTCTTACCTGTGCCTTCCCCTTGGTGGAAAACTGTGCTCACTCACCTTTCCAGAGCCTATTGTTGAGAAAGTTGAGAGTAAGCTCAGAAATTGAGAGCATGCCTTTAGATTGAAAGGTGGAGTCTAACTGACTAACTCTTTCCAAAGCCACCCTATCTCCAAAATCGCCCCGAAGATTGAAAAGCTCAGAGGAAAGTTTGTGGGGAGGTCCCATATGACTGGTGGCTCTCACCTCATCCAATGGAAGAAGGGTCAAAAGCCTTTATCCCGTGGTGGCTCGGTATTGAATATTGATCATATCTAGCCAAATGGATTTGGAGATACATGGAAAATGCAAGGTTATTGAAGCTAAATATGGCCTTTCAAAGCAGGCTGAAGTAGTCATCCATAGCTTTATGATGAAAGTATGATTAAGGTAATTTAGATAAATTCCTAGGTTTCTGTTCTGCAGCTTCAGTTGGTCCTTGGCAGTCCCTTCAAGTTTGGCTGATTTTAGTATGTAAATCTTCTTGCGGGACCCTTTAAGGGAGGAGATGCTTGGAAGCTGTGGCTTGAAAGGAATAACAACACTTTCAAGTGCTCTGAACAATATTTTGCTGCATCAAATTCTGTCATCTTTATGGCTCTTTACTGGTGTAAAGGATCACATCCTTTCTCAATGTCTTGATACTTTTGGGCAGATTTTTTTCTTTTGTAAATCCATTTTTGTGATTTTGGGACTCTTCTCCTGTTTTATAATTATTTTGTTTATCAGACAAATCATTTCCTCTCAAAAGCAAAAAGAAAAGAAAAATGAAAAGTGAAAAAGGAAGAGAGATCGTATACGGCTGTTATGGTGGGAATGCAATAAAAGAGGTTTTAAAGATGAAGTTGATGAGATAGACAGGCGTTAGAGTAAAAAAAATTATGGTTATTATGCCGTCGTGGAATATTTGATAACCCTTCCCTTACCACTTTATTGGATTGGTTGCTATCCTAGTAACTCATCTTTCTAAGAGGACTCCCTTAAAGTGTTTATCCTATTAGTTAGTAACTACAGAAATGGTTTGCATCTGACTAAAATCAGTAGAACCACAACAGAATCATAAATTGAAGTTGCTGAGTTGCACCAATTTCTTATGCAGGGGAATTGCCTTATTTACAGAGACTTTTGAAGCCATCCTCAGCGGTCATTGCACAACCTGATTTTCGGTGTCTCCAACAAATGGTATACATGGCAACCATACCATCCCTTGAATTTCTATGAAAATAAATTTTGTTTGAAGAATTTTTTTATGAAAACAACTTTGGAGTATGTGTTTTTATTTTACAAATCACTTGAATTCTAATTTCTGAAAATGTCTTTGCCGTATTTTACTTTCTTCCTTTTATAGGGAATTTCCAGTTCAAGGATGCTATTGGCAGATAAACCTGAGGAAGCAGTCTCATCTCCTCTGACATCTGCTTTGGCTTTAAGCAGCGGAAAAGATGGAGATAAAACAGACCAAAAAGTAATCTGTAAACGTTCCCAAGTCCAAGCTGTATTAAAGGGAATCAAACAGGTGAAGTCTTTGGACTATTCTTGTCACTTGCACACCAAAAACTTGAGTAAAAGCGGTGAAAGTCATGAGGGTGGAACTTGTTATTGAAAAACGAGGCTTTGTAATTATAGAATTTGATTAAATCTGAAGTTTTATGTTTTTAAGTCATAGTTATCAAAATGCTAATTGGATTGTATAAATTCTGTTAGCCTCATTTCTCTTGGGCCAACCTTTAGTTGTGTTAGAAATAATGAGCTTAGGTCATGGTGAAAGCCCATGGGTAGTTAAGACTTACTTTGCCCTAACTTTTTATTCTTTTCAAGGCTCATGTTGTCTATAAATTTCCCCCCTTTGTACCTTTATGAATCATTAGAAAATAATAAGTCTTTCAGCACCGTGTTTTTCTTCCTGTACTAGGGTTTGACATAAATTTGTGTGTTCTTTGTCTCTACTTTAAATGAGTTGTTTATTGAAAGTTTTTTGGGTTGGAGATTGAGATTGTAATTGAAATATCCTCCCCGTTTTCTTGTCAAGTTTTGTAATGCATTTTATATAACTGAAAGATGGCTTCCACGAAAAAGGTGGACTCATTTAGGTTTATCTTTTATTTGAAAAGAATTAATGGGACTGTTGCATTTGAATTTTTCTTCCAGAGTCCCAAAAAGGTCAACTTAGTTGCTGCTCTAGTTCGAGGCATGCGCGTTGAAGATGCACTGATGCAGTTACAATTAACTGTGAAGCGAGCTTCAAAAACTGTTTATCAGGTGAAACATTATCTTAGGATGCTTGATGTACACCTCGTTTATCAATCACTGTGTTTGAATATTTCTTTGATTTCATTATTTGGGGGAAACTTAAGCTGAGAAATAAACATACAATTACTTGAGTTTAGTCAACCAGTTTAGCTTCTATTATAGACAATTTCGATATATAAAAAAGATTTAGTAGCAGGAGGATGCATTGTTTAGCCACTGAATGAGGCTGAGAAGTTTTGTTTCGTTGTTCTTGCAAAAAAAAGGTCATTTGACAATAAGTATGGTTAATGGTTCTAGAGCTTGACACTATTTGGTTTTTAAAAAAATTAGACGCCGACTTTGCAAGGTACTGTGAATTCCTTCCATGTCATAAATTGTACAAAAGAAGCATGAGCACTTTAGCTTGATTAGGAAGTTGGGCATTTTGATTTGATGGCCTAAAATCCAATAATTAGGCCATCAAATCTTGAGTAAAGGGGTAGAAGCAGATGAGGAAAAAATTCGAAGTATGGTGAATTGGCCTCAACCTAAAGATATGATCGGACTGAGAGGCTTTTTGGGTTTGACCGGGTATTACTGAAGGTTTGTAAAAAGGGTACGGAGAAATTACAGCACCCTTAACCAAACTATTACAGTAGAACTCTTTTAGATTGAGTGAGGAAGCTACGGAAACTTTTGAGAAACTAAAACTGGCAATAACAACTATCCCTGTGTTAGCCTTACCCGATTGGTCCCTCCCATTCATTATAGAAACTGATGCATCTGGAATTGGGCTAGGAGCAGTGCTTTCCCAAAATGGCCATCCTATTGCATTTTTTAGCCATAAATTGTCCCTAAGAGTCCAAGCTAAATCCTTCTATGAGAGAGAACTGATGGCCTTGTCCTTTCTGTTAAAAACGGAGGCATTATCTTTTGGGAAAGAAGTTCACGATAATATCTGACCAAAAAGCCTTGAAATTTCTACTGGAGTAGAGAGAAGTCGAACCATAGTTTCCAAAGTGGCTTACCAAGCTTCTTGGATATGATTTTGAAATTCTTTATCAACCGTGATTACAGAATAAAGTAGCTAATGCTCTTTCTAGAATGGAACTATCTCCGGAACTTAATACCTTGTCCACTCTTGGTATCGTGGATTTAGAAGTGGTGCTGAAAGAAGTAGAGGAAGACAGTGAACTCCAAAGACTTGTTGACGATTTGAAGAAAAATCCAGGGGAAGGGAACAAGTATCGATGGGAGAATGGAAGACTCTTATATAAAAGAAGACTAGTGCTCTCCAAAAACTCAATGCTCATCCCCAACCTATGACTCATCTTTCATGATTCGATCTTATGGGGCTATTCAGAGTTTTTGAGAACCTACAAGAGAATGAATGGAGAGTTACATTGGAAGGGGATGAAGACGGATGCCAAGAAGTACATAGAGCAGTGTGATACTCGTCAGCGAAACAAGTACGAAGCTACCAAACCAGCTGGATTGTTACAGCCCATCCCAATCCCTGATCGGATATCGGAAGATTGGTCTAGGTAGCCCACCTATGACAGGGGGAGTATGTCATTGTAGCGGTGATTGATAGACTGAGCAAATGTGCTTACTTTATCTCCATGAAACACCCCTTCTTAGCTAAACAAGTGGCTGATACATTCATTGATAAGATTGTGAGAAAGCATGACATCCCGAAGTCCATCATTACCGATAGAGATAAGATATTTCTTAGTAATTTTTGGAAGAAGTTGTTTGCAACCATGGGCACTATATTGAAAAGAAGCACCGTATTTCATCCTCAAATGGATGGACAAACAAAACGAGTAAACATATGCCTAGAGACCTATTTGAGGTGTTTATGTAATGAGCAACCGAACAAATGGAATAAGTTTCTTCCCTAGGTAGAGCTGTGGTATAACACTACCTTTCATGCCTCCACTGAGACTACACCATTCCAAAAAGTATACGGGAGACCCCCACCACCTCTGTTATTATATGGAGATAGAAAGACTCCTAACAACGAGGTAGAATCATTGCTGAAAGAAAGGGGTTTAGCTTTAAATGCATTAAAAGAAAACCTATGTGGCCTAGAACCGAATGAAGAAAATGGCAGATCTTAAGCGAAGGGAACTCAAGTTCAAGGTGGGAGATGAAGTGTATTTGAAGTTGAGAGGATAGGCAATGTTCGTTGGCCAGGAAAAGGTGTGAGAAACTTGCCCCTAAATTTGATGGACCCTACAAAATAATAGAAGAAATTGGAGAAGTGGCTTACAGATTACAATTGCCACTGGAGGCTGTCTTACATAATGTATTTCACGTTTCCCAACTGAAGCTAAAACTGGGAAAGCAACAAGAGGTACAGCACCAACATTCCGTTCTGACTGAAGAATTTGAATTGCAGTTGTGGCTTGAGACAATTTTGGGAAATGGTTGATCAAATGGAAAGGGTTACCGGAAAGTGAAGCTACATGGAAATCAGTGTATCAAATGAATCGGCAATTCTCTATGTTCCACCTTGAGGACAAGGTGAACTTAGAACCGAAGGGTGTTGTAAGGCCTCCTATTATCCACACTTATAAAAGAAAGGGCAGGCAGGTAATTGTACAGTAATCCAATGGTGAGGGAATGATGCAGTTTGTGGGGCCCACAGGGAGGAAAGAGAGGGAGAGCTATAAGTATATCTTTAGGGGATTGCGTAGCTAGGTTATCTTTTTGCGAAAAGGTTGCTGTTAGCATTTTGAGAGGATTTTTCCCAGCCTTTACTATTTTCTTGAATTTCCATCTTTGAACTACTTGTTATTTCATATTTTGGCTGAAGGTAATATAAATAACAAGAGTACTGTCTCTGTTTTAGCCCGTTTTTGTTAGGATTTATTGTGTTTATATTGTTAGAATCCTAACATATTGCTAAGATTTGCTTACGATGTTAAAATTTGTGTCGTGACATTGTGAAGGTCATTCATTCAGCCAAAGCAAACGCAACCCACAACCACGGAATGGATTCAGATCGACTCCTTGTTGGTAAATGAAGCAAGTAAAGATAACCCATCCTTCATATTACAAGGGTTTGTGTATTTGACTTCTTGTTATCTTGTACAGCTGAAGCATTTGTGGGTAAGGGATTGTTTCGGAAAAGATTATCATATCATGCTAAAGGAAGATGTGGAGTCGAAGTTAAACCAGAATGCCGACTAACAGTTGTTCTTAGGGAGACAACACCTGAAGAAGAGGCAAAGATAGCAAAGCTTAAAGTAAGTAACTTCCGCAAGCTTACCAAGCGTGAACACCAACTTGTACCTCATAAGCTTATTGAGACCACACCTATCTGGAACCGGAAGGGCAAAGCCAAAGCGAACACAGAATGTTGAAAGGCTTTGTAGTATGATAATAACTGCTTCCAGTTGAGTTTCCTAATCTCTTTCTGCTAATGGTTTAATTTCATGTCCTTTTGTTCTAGACAAGTTAGTTAAGCAGGAAAAGGGATTTTGATGTGGTAAAATGTCCTCCATTAAGAATAAAATGTTCTTTAATGACAATTTTTATTCATTTTACCCAGCTTATTTTTAGTGACTCCCTTGATCTCTTTTCTTCGCCCATTTCAATTATGAGATCTTCCAAGAAAGATTTGTACGTCATATCTAAGGAGCAAGTTGTATAACCTTCATCATTGTCTTTGATATGGCTAGTTTAGAAGATTCTGCGTTGTTAGTTTGTTTGGTGGTAATTTTTTATTCATCAATTAGCGTCGAGTTGGTTTGTTTTGGCATCA

mRNA sequence

ATGGTTGGTTGGCAGAGATGTTTACGGTCCATGCTTGGCCATTTGCAAAACAAAGTGGAATTGAGTTACAATGCAGCTTCCAACTCTAGTTATCGTTTGCAATCTTCTCTTTCAAATGGGGAATTGCCTTATTTACAGAGACTTTTGAAGCCATCCTCAGCGGTCATTGCACAACCTGATTTTCGGTGTCTCCAACAAATGGGAATTTCCAGTTCAAGGATGCTATTGGCAGATAAACCTGAGGAAGCAGTCTCATCTCCTCTGACATCTGCTTTGGCTTTAAGCAGCGGAAAAGATGGAGATAAAACAGACCAAAAAGTAATCTGTAAACGTTCCCAAGTCCAAGCTGTATTAAAGGGAATCAAACAGAGTCCCAAAAAGGTCAACTTAGTTGCTGCTCTAGTTCGAGGCATGCGCGTTGAAGATGCACTGATGCAGTTACAATTAACTGTGAAGCGAGCTTCAAAAACTGTTTATCAGGTCATTCATTCAGCCAAAGCAAACGCAACCCACAACCACGGAATGGATTCAGATCGACTCCTTGTTGCTGAAGCATTTGTGGGTAAGGGATTGTTTCGGAAAAGATTATCATATCATGCTAAAGGAAGATGTGGAGTCGAAGTTAAACCAGAATGCCGACTAACAGTTGTTCTTAGGGAGACAACACCTGAAGAAGAGGCAAAGATAGCAAAGCTTAAAGTAAGTAACTTCCGCAAGCTTACCAAGCGTGAACACCAACTTGTACCTCATAAGCTTATTGAGACCACACCTATCTGGAACCGGAAGGGCAAAGCCAAAGCGAACACAGAATGTTGA

Coding sequence (CDS)

ATGGTTGGTTGGCAGAGATGTTTACGGTCCATGCTTGGCCATTTGCAAAACAAAGTGGAATTGAGTTACAATGCAGCTTCCAACTCTAGTTATCGTTTGCAATCTTCTCTTTCAAATGGGGAATTGCCTTATTTACAGAGACTTTTGAAGCCATCCTCAGCGGTCATTGCACAACCTGATTTTCGGTGTCTCCAACAAATGGGAATTTCCAGTTCAAGGATGCTATTGGCAGATAAACCTGAGGAAGCAGTCTCATCTCCTCTGACATCTGCTTTGGCTTTAAGCAGCGGAAAAGATGGAGATAAAACAGACCAAAAAGTAATCTGTAAACGTTCCCAAGTCCAAGCTGTATTAAAGGGAATCAAACAGAGTCCCAAAAAGGTCAACTTAGTTGCTGCTCTAGTTCGAGGCATGCGCGTTGAAGATGCACTGATGCAGTTACAATTAACTGTGAAGCGAGCTTCAAAAACTGTTTATCAGGTCATTCATTCAGCCAAAGCAAACGCAACCCACAACCACGGAATGGATTCAGATCGACTCCTTGTTGCTGAAGCATTTGTGGGTAAGGGATTGTTTCGGAAAAGATTATCATATCATGCTAAAGGAAGATGTGGAGTCGAAGTTAAACCAGAATGCCGACTAACAGTTGTTCTTAGGGAGACAACACCTGAAGAAGAGGCAAAGATAGCAAAGCTTAAAGTAAGTAACTTCCGCAAGCTTACCAAGCGTGAACACCAACTTGTACCTCATAAGCTTATTGAGACCACACCTATCTGGAACCGGAAGGGCAAAGCCAAAGCGAACACAGAATGTTGA

Protein sequence

MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPDFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKLTKREHQLVPHKLIETTPIWNRKGKAKANTEC*

Homology

[Close]

BLAST of CsaV3_1G014590 vs. NCBI nr
Match: XP_031735947.1 (uncharacterized protein LOC116401688 [Cucumis sativus] >KGN64904.1 hypothetical protein Csa_022819 [Cucumis sativus])

HSP 1 Score: 522.7 bits (1345), Expect = 1.9e-144
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60
           MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD
Sbjct: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60

Query: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120
           FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG
Sbjct: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120

Query: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180

Query: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240
           LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL
Sbjct: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240

Query: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 272
           TKREHQLVPHKLIETTPIWNRKGKAKANTEC
Sbjct: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 271

[Close]

BLAST of CsaV3_1G014590 vs. NCBI nr
Match: XP_016903208.1 (PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis melo] >XP_016903212.1 PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis melo] >XP_016903215.1 PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis melo] >XP_016903217.1 PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis melo])

HSP 1 Score: 505.0 bits (1299), Expect = 4.1e-139
Identity = 260/271 (95.94%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60
           MV WQRCLRS+LGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSA IAQPD
Sbjct: 1   MVSWQRCLRSILGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAGIAQPD 60

Query: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120
           FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKV+CKRS+VQAVLKG
Sbjct: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVVCKRSKVQAVLKG 120

Query: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMD+DRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDADRL 180

Query: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240
           LVAEAFVGKGLFRKRLSYHAKGRCG+EVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL
Sbjct: 181 LVAEAFVGKGLFRKRLSYHAKGRCGIEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240

Query: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 272
           TKRE++LVPHKLIETTPIWNRKGKA+A TEC
Sbjct: 241 TKRENRLVPHKLIETTPIWNRKGKARATTEC 271

[Close]

BLAST of CsaV3_1G014590 vs. NCBI nr
Match: XP_038894802.1 (50S ribosomal protein L22, chloroplastic-like [Benincasa hispida] >XP_038894803.1 50S ribosomal protein L22, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 467.6 bits (1202), Expect = 7.2e-128
Identity = 239/271 (88.19%), Postives = 257/271 (94.83%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60
           MVGWQR +RSMLGH+Q +VE SY+ A+NSSYRLQSSLS GELPYLQRLLKPSSA I QPD
Sbjct: 1   MVGWQRYIRSMLGHVQKRVESSYSLAANSSYRLQSSLSYGELPYLQRLLKPSSAGIVQPD 60

Query: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120
           FRCLQQMGISSSRMLLADK EEAVSSPLTSALALSSGKDGD+ DQKV+CK S+VQA+LKG
Sbjct: 61  FRCLQQMGISSSRMLLADKSEEAVSSPLTSALALSSGKDGDQKDQKVVCKPSKVQAILKG 120

Query: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMD+DRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDADRL 180

Query: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240
           L+AEAFVGKG F KRLSYHAKG+CG++V+PECRLTVVLRETTPEEEA+IAKLKVSNFRKL
Sbjct: 181 LIAEAFVGKGFFMKRLSYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLKVSNFRKL 240

Query: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 272
           TKRE++LVPHKLIETTPIWNRKGKAK N EC
Sbjct: 241 TKRENRLVPHKLIETTPIWNRKGKAKTNAEC 271

[Close]

BLAST of CsaV3_1G014590 vs. NCBI nr
Match: KAG6596231.1 (hypothetical protein SDJN03_09411, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 438.0 bits (1125), Expect = 6.1e-119
Identity = 226/271 (83.39%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAVIAQP 60
           M GWQRC+RSMLGH+Q +VELSYNAA+NS+ YR QS+LS G+LPYLQRLLKPSS  + QP
Sbjct: 49  MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 108

Query: 61  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLK 120
            +RCLQQMGISSSRMLLADK EE +SSPLTSALA+SSGKDGD TDQKV+ K S+VQA+LK
Sbjct: 109 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGD-TDQKVVSKPSKVQAILK 168

Query: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 180
           GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHG+DSDR
Sbjct: 169 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 228

Query: 181 LLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 240
           LLVAEAFVGKG F+KR+SYHAKG+CG++V+PECRLTVVLRETTPEEEA+IAKL+V  FRK
Sbjct: 229 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 288

Query: 241 LTKREHQLVPHKLIETTPIWNRKGKAKANTE 271
           L+KRE +LVPHKLIETTPIWNRKGKA+AN E
Sbjct: 289 LSKRESRLVPHKLIETTPIWNRKGKARANEE 318

[Close]

BLAST of CsaV3_1G014590 vs. NCBI nr
Match: XP_022971240.1 (uncharacterized protein LOC111470023 [Cucurbita maxima])

HSP 1 Score: 438.0 bits (1125), Expect = 6.1e-119
Identity = 227/271 (83.76%), Postives = 251/271 (92.62%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAVIAQP 60
           M GWQRC+RSMLGH+Q +VELSYNAA NS  YR QS+LS G+LPYLQRLLKPSS  + QP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 61  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLK 120
            +RCLQQMGISSSRMLLADK EE +SSPLTSALA+SSGKDGD TDQKV+ K S+VQA+LK
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGD-TDQKVVSKPSKVQAILK 120

Query: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 180
           GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHG+DSDR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 180

Query: 181 LLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 240
           LLVAEAFVGKGLF+KR+SYHAKG+CG++V+PECRLTVVLRETTPEEEA+IAKL+V  FRK
Sbjct: 181 LLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 240

Query: 241 LTKREHQLVPHKLIETTPIWNRKGKAKANTE 271
           L+KRE +LVPHKLIETTPIWNRKGKA+AN E
Sbjct: 241 LSKRESRLVPHKLIETTPIWNRKGKARANEE 270

[Close]

BLAST of CsaV3_1G014590 vs. ExPASy Swiss-Prot
Match: Q0ANQ5 (50S ribosomal protein L22 OS=Maricaulis maris (strain MCS10) OX=394221 GN=rplV PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.0e-20
Identity = 55/109 (50.46%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 112 SQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 171
           ++ +A L+ I+ SP+K+NLVAAL+RG +VE AL  L+ + KR SK V + + SA ANA +
Sbjct: 13  NEARAKLRMIRTSPQKLNLVAALIRGKKVERALADLEFSRKRISKEVKKTLESAIANAEN 72

Query: 172 NHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRE 221
           NHG+D D L+V+EAFVGK L  KR    A+GR    +KP   LT+V+RE
Sbjct: 73  NHGLDIDSLVVSEAFVGKNLVMKRFRARARGRGAKILKPFSELTIVVRE 121

[Close]

BLAST of CsaV3_1G014590 vs. ExPASy Swiss-Prot
Match: Q92QG5 (50S ribosomal protein L22 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rplV PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.0e-20
Identity = 55/118 (46.61%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 110 KRSQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 169
           K ++ QAV + I+ SP+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA ANA
Sbjct: 11  KDNEAQAVARTIRVSPQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVKKTLESAIANA 70

Query: 170 THNHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEA 228
            +NH +D D L+VAEAFVGK +  KR     +GR     KP   LT+V+RE   + EA
Sbjct: 71  ENNHDLDVDSLIVAEAFVGKSIVMKRFHARGRGRASRVEKPFAHLTIVVREVEAKGEA 128

[Close]

BLAST of CsaV3_1G014590 vs. ExPASy Swiss-Prot
Match: A6U864 (50S ribosomal protein L22 OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=rplV PE=3 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.0e-20
Identity = 55/118 (46.61%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 110 KRSQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 169
           K ++ QAV + I+ SP+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA ANA
Sbjct: 11  KDNEAQAVARTIRVSPQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVRKTLESAIANA 70

Query: 170 THNHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEA 228
            +NH +D D L+VAEAFVGK +  KR     +GR     KP   LT+V+RE   + EA
Sbjct: 71  ENNHDLDVDSLIVAEAFVGKSIVMKRFHARGRGRASRVEKPFAHLTIVVREVEAKGEA 128

[Close]

BLAST of CsaV3_1G014590 vs. ExPASy Swiss-Prot
Match: B8ELF8 (50S ribosomal protein L22 OS=Methylocella silvestris (strain DSM 15510 / CIP 108128 / LMG 27833 / NCIMB 13906 / BL2) OX=395965 GN=rplV PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-19
Identity = 55/118 (46.61%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 110 KRSQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 169
           K ++ +AV + ++ SP+K+NL+A L+RG +VE AL +L+ + KRA+  V + + SA ANA
Sbjct: 11  KDNEAKAVARMLRISPQKLNLLAQLIRGKKVERALAELEFSRKRAAFDVRKTLESAIANA 70

Query: 170 THNHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEA 228
            +NH ++ D L+VAEAFVGK L  KR S  A+GR G   KP   LT+VLRE     +A
Sbjct: 71  ENNHSLEVDDLVVAEAFVGKALVMKRFSPRARGRSGKIQKPFSHLTIVLREVAVAAQA 128

[Close]

BLAST of CsaV3_1G014590 vs. ExPASy Swiss-Prot
Match: Q98N52 (50S ribosomal protein L22 OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=rplV PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-19
Identity = 54/116 (46.55%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 112 SQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 171
           ++ +AVL+ I+ SP+K+NLVAAL+RG +V  AL  L+ + KR S TV + + SA ANA +
Sbjct: 13  NEARAVLRTIRISPQKLNLVAALIRGKKVATALSDLEFSAKRISGTVKKTLESAIANAEN 72

Query: 172 NHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEA 228
           NH +D D L+VAEA+VGK +  KR     +GR     KP   LT+V+RE   + EA
Sbjct: 73  NHDLDVDALVVAEAYVGKSIVMKRFHARGRGRASRIEKPFSHLTIVVREVEEKGEA 128

[Close]

BLAST of CsaV3_1G014590 vs. ExPASy TrEMBL
Match: A0A0A0LVB7 (50S ribosomal protein L22, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G153000 PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 9.2e-145
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60
           MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD
Sbjct: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60

Query: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120
           FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG
Sbjct: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120

Query: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180

Query: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240
           LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL
Sbjct: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240

Query: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 272
           TKREHQLVPHKLIETTPIWNRKGKAKANTEC
Sbjct: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 271

[Close]

BLAST of CsaV3_1G014590 vs. ExPASy TrEMBL
Match: A0A1S4E5G5 (50S ribosomal protein L22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107992071 PE=3 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.0e-139
Identity = 260/271 (95.94%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAVIAQPD 60
           MV WQRCLRS+LGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSA IAQPD
Sbjct: 1   MVSWQRCLRSILGHLQNKVELSYNAASNSSYRLQSSLSNGELPYLQRLLKPSSAGIAQPD 60

Query: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLKG 120
           FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKV+CKRS+VQAVLKG
Sbjct: 61  FRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVVCKRSKVQAVLKG 120

Query: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDRL 180
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMD+DRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDADRL 180

Query: 181 LVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240
           LVAEAFVGKGLFRKRLSYHAKGRCG+EVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL
Sbjct: 181 LVAEAFVGKGLFRKRLSYHAKGRCGIEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRKL 240

Query: 241 TKREHQLVPHKLIETTPIWNRKGKAKANTEC 272
           TKRE++LVPHKLIETTPIWNRKGKA+A TEC
Sbjct: 241 TKRENRLVPHKLIETTPIWNRKGKARATTEC 271

[Close]

BLAST of CsaV3_1G014590 vs. ExPASy TrEMBL
Match: A0A6J1I573 (50S ribosomal protein L22, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470023 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 3.0e-119
Identity = 227/271 (83.76%), Postives = 251/271 (92.62%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAVIAQP 60
           M GWQRC+RSMLGH+Q +VELSYNAA NS  YR QS+LS G+LPYLQRLLKPSS  + QP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 61  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLK 120
            +RCLQQMGISSSRMLLADK EE +SSPLTSALA+SSGKDGD TDQKV+ K S+VQA+LK
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGD-TDQKVVSKPSKVQAILK 120

Query: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 180
           GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHG+DSDR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 180

Query: 181 LLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 240
           LLVAEAFVGKGLF+KR+SYHAKG+CG++V+PECRLTVVLRETTPEEEA+IAKL+V  FRK
Sbjct: 181 LLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 240

Query: 241 LTKREHQLVPHKLIETTPIWNRKGKAKANTE 271
           L+KRE +LVPHKLIETTPIWNRKGKA+AN E
Sbjct: 241 LSKRESRLVPHKLIETTPIWNRKGKARANEE 270

[Close]

BLAST of CsaV3_1G014590 vs. ExPASy TrEMBL
Match: A0A6J1GU02 (50S ribosomal protein L22, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457075 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 3.0e-119
Identity = 226/271 (83.39%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAVIAQP 60
           M GWQRC+RSMLGH+Q +VELSYNAA+NS+ YR QS+LS G+LPYLQRLLKPSS  + QP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 61  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLK 120
            +RCLQQMGISSSRMLLADK EE +SSPLTSALA+SSGKDGD TDQKV+ K S+VQA+LK
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGD-TDQKVVSKPSKVQAILK 120

Query: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 180
           GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHG+DSDR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 180

Query: 181 LLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 240
           LLVAEAFVGKG F+KR+SYHAKG+CG++V+PECRLTVVLRETTPEEEA+IAKL+V  FRK
Sbjct: 181 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 240

Query: 241 LTKREHQLVPHKLIETTPIWNRKGKAKANTE 271
           L+KRE +LVPHKLIETTPIWNRKGKA+AN E
Sbjct: 241 LSKRESRLVPHKLIETTPIWNRKGKARANEE 270

[Close]

BLAST of CsaV3_1G014590 vs. ExPASy TrEMBL
Match: A0A6J1DVK1 (50S ribosomal protein L22, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024848 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 5.1e-119
Identity = 231/272 (84.93%), Postives = 254/272 (93.38%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAVIAQP 60
           MVGWQR +RSMLGH+Q +VELSYN A+NS+ YRLQSSLS GELPYLQRLLKPSSA I QP
Sbjct: 1   MVGWQRYVRSMLGHVQKRVELSYNVAANSNCYRLQSSLSYGELPYLQRLLKPSSAGITQP 60

Query: 61  DFRCLQQMGISSSRMLLADKPEE-AVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVL 120
            ++CLQQMGISSSR LLADK EE AVSSPLTSALALSSGK+GDK DQKV+ K S+VQA+L
Sbjct: 61  YYQCLQQMGISSSRFLLADKSEEAAVSSPLTSALALSSGKEGDK-DQKVVSKPSKVQAIL 120

Query: 121 KGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSD 180
           KGIKQSPKKVNLVAALVRGMRVEDAL+QLQLTVKRASKTVYQVIHSAKANATHNHGMDSD
Sbjct: 121 KGIKQSPKKVNLVAALVRGMRVEDALLQLQLTVKRASKTVYQVIHSAKANATHNHGMDSD 180

Query: 181 RLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFR 240
           RLLVAEAFVGKG F+KR+SYHAKG+CG++V+PECRLTVV+RE TPEEEA+IAKL+VSNFR
Sbjct: 181 RLLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVVREITPEEEAEIAKLRVSNFR 240

Query: 241 KLTKREHQLVPHKLIETTPIWNRKGKAKANTE 271
           KLTKRE +LVPHKLIETTPIWNRKGKA+AN E
Sbjct: 241 KLTKRESRLVPHKLIETTPIWNRKGKARANEE 271

[Close]

BLAST of CsaV3_1G014590 vs. TAIR 10
Match: AT4G28360.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 302.4 bits (773), Expect = 3.7e-82
Identity = 171/271 (63.10%), Postives = 216/271 (79.70%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASN---SSYRLQSSLSNGELPYLQRLLKPSSAVIA 60
           MVGW+R L++++  +  +V+ S+ + +N   S+  L+S  S G   YLQ LL+PS +  +
Sbjct: 1   MVGWKRNLQTVIRQVGRRVKNSHISTANYSSSTRNLESPFSQG---YLQSLLRPSYS--S 60

Query: 61  QPDFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAV 120
           +P +  LQQ+GIS+SR L A   EE VSSPL+S   L SGK+    +QK+I KR +VQAV
Sbjct: 61  RPLYHHLQQLGISTSRQLQAS--EEPVSSPLSSPALLGSGKE---EEQKIIPKRQKVQAV 120

Query: 121 LKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDS 180
           LK IKQSPKKVNLVAALVRGMRVEDAL+QLQ+TVKRA++TVY+VIH+A+ANATHNHG+D 
Sbjct: 121 LKSIKQSPKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGLDP 180

Query: 181 DRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNF 240
           DRLLVAEAFVGKGLF K+++YHAKGR G+   P CRLTV++RETTPEEEA+IA+LKV NF
Sbjct: 181 DRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTPEEEAEIARLKVHNF 240

Query: 241 RKLTKREHQLVPHKLIETTPIWNRKGKAKAN 269
           +K +KRE QLVPHKLIET+PIWNR+G  KAN
Sbjct: 241 KKKSKRERQLVPHKLIETSPIWNRRG-TKAN 260

[Close]

BLAST of CsaV3_1G014590 vs. TAIR 10
Match: AT1G52370.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 294.3 bits (752), Expect = 1.0e-79
Identity = 167/265 (63.02%), Postives = 208/265 (78.49%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASN--SSYRLQSSLSNGELPYLQRLLKPSSAVIAQ 60
           M GWQ+ L+ ++  +  +V+ S+ + +N  S+  L+S  S G   YLQ LL+  S   ++
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQG---YLQSLLR--STYSSR 60

Query: 61  PDFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVL 120
           P +  LQQ+GIS+SR L A   EE VSSPL+S   L SGK+    +QK+I KR +VQAVL
Sbjct: 61  PLYYHLQQLGISTSRQLQAG--EEPVSSPLSSPALLGSGKE---EEQKIIPKRQKVQAVL 120

Query: 121 KGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSD 180
           K IKQSPKKVNLVAALVRGMRVEDALMQLQ+TVKRAS+TVY+VIH+A+ANATHNHG+D D
Sbjct: 121 KSIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPD 180

Query: 181 RLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFR 240
           RLLVAEAFVGKGLF K+++YHAKGR G+   P CRLTV++RETT EEEA+IA+LKV NF+
Sbjct: 181 RLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFK 240

Query: 241 KLTKREHQLVPHKLIETTPIWNRKG 264
           KL KR+ QLVPHKLIET+PIWNR+G
Sbjct: 241 KLNKRQRQLVPHKLIETSPIWNRRG 255

[Close]

BLAST of CsaV3_1G014590 vs. TAIR 10
Match: AT1G52370.2 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 294.3 bits (752), Expect = 1.0e-79
Identity = 167/265 (63.02%), Postives = 208/265 (78.49%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASN--SSYRLQSSLSNGELPYLQRLLKPSSAVIAQ 60
           M GWQ+ L+ ++  +  +V+ S+ + +N  S+  L+S  S G   YLQ LL+  S   ++
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQG---YLQSLLR--STYSSR 60

Query: 61  PDFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVL 120
           P +  LQQ+GIS+SR L A   EE VSSPL+S   L SGK+    +QK+I KR +VQAVL
Sbjct: 61  PLYYHLQQLGISTSRQLQAG--EEPVSSPLSSPALLGSGKE---EEQKIIPKRQKVQAVL 120

Query: 121 KGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSD 180
           K IKQSPKKVNLVAALVRGMRVEDALMQLQ+TVKRAS+TVY+VIH+A+ANATHNHG+D D
Sbjct: 121 KSIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPD 180

Query: 181 RLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFR 240
           RLLVAEAFVGKGLF K+++YHAKGR G+   P CRLTV++RETT EEEA+IA+LKV NF+
Sbjct: 181 RLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFK 240

Query: 241 KLTKREHQLVPHKLIETTPIWNRKG 264
           KL KR+ QLVPHKLIET+PIWNR+G
Sbjct: 241 KLNKRQRQLVPHKLIETSPIWNRRG 255

[Close]

BLAST of CsaV3_1G014590 vs. TAIR 10
Match: AT1G52370.3 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 294.3 bits (752), Expect = 1.0e-79
Identity = 167/265 (63.02%), Postives = 208/265 (78.49%), Query Frame = 0


Query: 1   MVGWQRCLRSMLGHLQNKVELSYNAASN--SSYRLQSSLSNGELPYLQRLLKPSSAVIAQ 60
           M GWQ+ L+ ++  +  +V+ S+ + +N  S+  L+S  S G   YLQ LL+  S   ++
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQG---YLQSLLR--STYSSR 60

Query: 61  PDFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVL 120
           P +  LQQ+GIS+SR L A   EE VSSPL+S   L SGK+    +QK+I KR +VQAVL
Sbjct: 61  PLYYHLQQLGISTSRQLQAG--EEPVSSPLSSPALLGSGKE---EEQKIIPKRQKVQAVL 120

Query: 121 KGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSD 180
           K IKQSPKKVNLVAALVRGMRVEDALMQLQ+TVKRAS+TVY+VIH+A+ANATHNHG+D D
Sbjct: 121 KSIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPD 180

Query: 181 RLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFR 240
           RLLVAEAFVGKGLF K+++YHAKGR G+   P CRLTV++RETT EEEA+IA+LKV NF+
Sbjct: 181 RLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFK 240

Query: 241 KLTKREHQLVPHKLIETTPIWNRKG 264
           KL KR+ QLVPHKLIET+PIWNR+G
Sbjct: 241 KLNKRQRQLVPHKLIETSPIWNRRG 255

[Close]

BLAST of CsaV3_1G014590 vs. TAIR 10
Match: ATCG00810.1 (ribosomal protein L22 )

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09
Identity = 36/109 (33.03%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 112 SQVQAVLKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 171
           ++V A+ + I  S  K   V   +RG   E+ALM L+L   R    ++++++SA ANA+H
Sbjct: 11  TEVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASH 70

Query: 172 NHGMDSDRLLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRE 221
           N G     L++++A V +G   K+L   A+GR     +  C +T+VL +
Sbjct: 71  NKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLED 119

The following BLAST results are available for this feature:

BLAST of CsaV3_1G014590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031735947.1	1.9e-144	100.00	uncharacterized protein LOC116401688 [Cucumis sativus] >KGN64904.1 hypothetical ...	[more]
XP_016903208.1	4.1e-139	95.94	PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Cucumis melo] >XP_0169...	[more]
XP_038894802.1	7.2e-128	88.19	50S ribosomal protein L22, chloroplastic-like [Benincasa hispida] >XP_038894803....	[more]
KAG6596231.1	6.1e-119	83.39	hypothetical protein SDJN03_09411, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022971240.1	6.1e-119	83.76	uncharacterized protein LOC111470023 [Cucurbita maxima]	[more]

BLAST of CsaV3_1G014590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0ANQ5	3.0e-20	50.46	50S ribosomal protein L22 OS=Maricaulis maris (strain MCS10) OX=394221 GN=rplV P...	[more]
Q92QG5	4.0e-20	46.61	50S ribosomal protein L22 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rplV ...	[more]
A6U864	4.0e-20	46.61	50S ribosomal protein L22 OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=...	[more]
B8ELF8	2.6e-19	46.61	50S ribosomal protein L22 OS=Methylocella silvestris (strain DSM 15510 / CIP 108...	[more]
Q98N52	2.6e-19	46.55	50S ribosomal protein L22 OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 91...	[more]

BLAST of CsaV3_1G014590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVB7	9.2e-145	100.00	50S ribosomal protein L22, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G153...	[more]
A0A1S4E5G5	2.0e-139	95.94	50S ribosomal protein L22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107992071...	[more]
A0A6J1I573	3.0e-119	83.76	50S ribosomal protein L22, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1GU02	3.0e-119	83.39	50S ribosomal protein L22, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1DVK1	5.1e-119	84.93	50S ribosomal protein L22, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of CsaV3_1G014590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28360.1	3.7e-82	63.10	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.1	1.0e-79	63.02	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.2	1.0e-79	63.02	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.3	1.0e-79	63.02	Ribosomal protein L22p/L17e family protein	[more]
ATCG00810.1	1.1e-09	33.03	ribosomal protein L22	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001063	Ribosomal protein L22/L17	PFAM	PF00237	Ribosomal_L22	coord: 117..219 e-value: 5.3E-26 score: 90.9
IPR001063	Ribosomal protein L22/L17	CDD	cd00336	Ribosomal_L22	coord: 114..218 e-value: 1.48404E-36 score: 123.755
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	TIGRFAM	TIGR01044	TIGR01044	coord: 116..217 e-value: 2.4E-24 score: 83.5
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	PANTHER	PTHR13501	CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED	coord: 30..258
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	HAMAP	MF_01331_B	Ribosomal_L22_B	coord: 112..221 score: 20.881777
IPR036394	Ribosomal protein L22/L17 superfamily	GENE3D	3.90.470.10	Ribosomal protein L22/L17	coord: 98..250 e-value: 4.4E-48 score: 165.0
IPR036394	Ribosomal protein L22/L17 superfamily	SUPERFAMILY	54843	Ribosomal protein L22	coord: 110..221
None	No IPR available	PANTHER	PTHR13501:SF8	39S RIBOSOMAL PROTEIN L22, MITOCHONDRIAL	coord: 30..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G014590.1	CsaV3_1G014590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome