CsaV3_1G014290 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G014290
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 9734924 .. 9735157 (+)
RNA-Seq ExpressionCsaV3_1G014290
SyntenyCsaV3_1G014290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAAGTTCTTAAGCTTCCAGCAGGGTAGTCTTTATTCCGAATTGAAGATTAGAATTGAACTTCAAAGCTTAGGAGACTTTATCTCTCAAATTTCTGAAACAATTGGGAGGCTAGATGAGTGCTTGTTGCAACCACCCTTTAAGACTATTGAGATGTGCATTAATGAGGTAATCAACATCGACCATCAAGTTCAGCATGTACATCGTCAAATTATAGTCCAGGATTTTGTTTAG

mRNA sequence

GTAAAGTTCTTAAGCTTCCAGCAGGGTAGTCTTTATTCCGAATTGAAGATTAGAATTGAACTTCAAAGCTTAGGAGACTTTATCTCTCAAATTTCTGAAACAATTGGGAGGCTAGATGAGTGCTTGTTGCAACCACCCTTTAAGACTATTGAGATGTGCATTAATGAGGTAATCAACATCGACCATCAAGTTCAGCATGTACATCGTCAAATTATAGTCCAGGATTTTGTTTAG

Coding sequence (CDS)

GTAAAGTTCTTAAGCTTCCAGCAGGGTAGTCTTTATTCCGAATTGAAGATTAGAATTGAACTTCAAAGCTTAGGAGACTTTATCTCTCAAATTTCTGAAACAATTGGGAGGCTAGATGAGTGCTTGTTGCAACCACCCTTTAAGACTATTGAGATGTGCATTAATGAGGTAATCAACATCGACCATCAAGTTCAGCATGTACATCGTCAAATTATAGTCCAGGATTTTGTTTAG

Protein sequence

VKFLSFQQGSLYSELKIRIELQSLGDFISQISETIGRLDECLLQPPFKTIEMCINEVINIDHQVQHVHRQIIVQDFV*
Homology
[Close]
BLAST of CsaV3_1G014290 vs. NCBI nr
Match: KAE8652788.1 (hypothetical protein Csa_022846, partial [Cucumis sativus])

HSP 1 Score: 154.5 bits (389), Expect = 3.9e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  VKFLSFQQGSLYSELKIRIELQSLGDFISQISETIGRLDECLLQPPFKTIEMCINEVINI 60
          VKFLSFQQGSLYSELKIRIELQSLGDFISQISETIGRLDECLLQPPFKTIEMCINEVINI
Sbjct: 1  VKFLSFQQGSLYSELKIRIELQSLGDFISQISETIGRLDECLLQPPFKTIEMCINEVINI 60

Query: 61 DHQVQHVHRQIIVQDFV 78
          DHQVQHVHRQIIVQDFV
Sbjct: 61 DHQVQHVHRQIIVQDFV 77

The following BLAST results are available for this feature:
BLAST of CsaV3_1G014290 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652788.13.9e-34100.00hypothetical protein Csa_022846, partial [Cucumis sativus][more]
BLAST of CsaV3_1G014290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G014290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G014290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G014290.1CsaV3_1G014290.1mRNA