CsaV3_1G013830 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G013830
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 9132524 .. 9132807 (+)
RNA-Seq ExpressionCsaV3_1G013830
SyntenyCsaV3_1G013830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCAAGTTGTGTCAATCGAGGCAAGCTGGTGATCAAAAAAAGATTATTAGTGGAAAGGCCTCAAACTTCGTCTGCGCGTCTACGTCCTTCAATGTCGCAACTTTGCCCCGAACGCCTCAGACTACGACTTAGTTATAGAAGTATATTTTTATTGTCAGTTTAGACCTAGGCCTGATTGTAGCCATTTCTCTTCAGTTTCCTCTCCGTTATCTGATTGCTTTTTGTTGGTTTATGTTTTTGAACAATTCCTCATCATCCAACACGTGGATGAAAGGCTAA

mRNA sequence

ATGGAGTCAAGTTGTGTCAATCGAGGCAAGCTGGTGATCAAAAAAAGATTATTAGTGGAAAGGCCTCAAACTTCGTCTGCGCGTCTACGTCCTTCAATGTCGCAACTTTGCCCCGAACGCCTCAGACTACGACTTAGTTATAGAAACCTAGGCCTGATTGTAGCCATTTCTCTTCAGTTTCCTCTCCGTTATCTGATTGCTTTTTGTTGGTTTATGTTTTTGAACAATTCCTCATCATCCAACACGTGGATGAAAGGCTAA

Coding sequence (CDS)

ATGGAGTCAAGTTGTGTCAATCGAGGCAAGCTGGTGATCAAAAAAAGATTATTAGTGGAAAGGCCTCAAACTTCGTCTGCGCGTCTACGTCCTTCAATGTCGCAACTTTGCCCCGAACGCCTCAGACTACGACTTAGTTATAGAAACCTAGGCCTGATTGTAGCCATTTCTCTTCAGTTTCCTCTCCGTTATCTGATTGCTTTTTGTTGGTTTATGTTTTTGAACAATTCCTCATCATCCAACACGTGGATGAAAGGCTAA

Protein sequence

MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQFPLRYLIAFCWFMFLNNSSSSNTWMKG*
Homology
[Close]
BLAST of CsaV3_1G013830 vs. NCBI nr
Match: KGN64823.1 (hypothetical protein Csa_022855 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 4.5e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60
          MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF
Sbjct: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60

Query: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 87
          PLRYLIAFCWFMFLNNSSSSNTWMKG
Sbjct: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 86

[Close]
BLAST of CsaV3_1G013830 vs. ExPASy TrEMBL
Match: A0A0A0LSP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G119900 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.2e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60
          MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF
Sbjct: 1  MESSCVNRGKLVIKKRLLVERPQTSSARLRPSMSQLCPERLRLRLSYRNLGLIVAISLQF 60

Query: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 87
          PLRYLIAFCWFMFLNNSSSSNTWMKG
Sbjct: 61 PLRYLIAFCWFMFLNNSSSSNTWMKG 86

The following BLAST results are available for this feature:
BLAST of CsaV3_1G013830 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64823.14.5e-39100.00hypothetical protein Csa_022855 [Cucumis sativus][more]
BLAST of CsaV3_1G013830 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G013830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSP92.2e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G119900 PE=4 SV=1[more]
BLAST of CsaV3_1G013830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G013830.1CsaV3_1G013830.1mRNA