CsaV3_1G013060 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G013060
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	RING/U-box superfamily protein
Location	chr1: 8402134 .. 8406277 (+)
RNA-Seq Expression	CsaV3_1G013060
Synteny	CsaV3_1G013060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTGCCTCATTCTCACGTCAAATAATAATTATTTGAGGAAAAAGAAAAAGAGTTTAGTTTGTATTTTCAATCGCAAAGGTTGCGCGTACTCGGTTAAGAAAAGGTACGATTCAGCGGAATGTGGAAGATCATTTCTCCGTCTTTCCATCTTCCTTCTACAATCATTTTCAACAAATTCTCCAAATTCCAAAACCCCTTTTGATTCTTCTATACTCCTTCAGTTTCCCTATCTTCTTCACTCCCCATTACTCCACTCTTCTTCTCTCCCAACCTCACACAACCAACAATCAACTGCAATGGCGGACACCATGAACGACGACGACTGCGTTCAGGATTTGATCACCCAACAGCGTTCCGAAATCCTTTCCGCCAAAACCCTTTTCTCTGATCTCGATTTCGCCTTCCAACTTCAACTCCAGGAGGCAATGGATGCCTCTCTTGCTTCTAAACCCTCCACCGACTCATCTTCCTCACTTAACACCCCCGACCCTGTCTTGGATTCTGAAGACACTAGCGGTTTAGACTTGGCTACCACTCTTATGCTCGAAGACATTGCGAGGTTTGCTATGGAGTTCAAGGACCGGGAGCAATGTCAGACTGAAATGAGGAAAATGAAGGAGGAGCTTGATCGTCGGATTCATGATCAGAAGTTTGCGGAATTTATTCGGAGTGTTCCTGAGAATGAGTGGAGGGAGTATGGGGATAATTATGAGAAGCCGTATGGTGAAAGTTCATCGTCTTCTTCTTCTTCTTCTTCTTCTTCCTGGAGTGTGGACTCTGAATGTTGTAGGGTGTATTCGAAGGGGTTGATTAGTGAAGAGAGGATTAGAGATATGGTGGTTAGGGTTGCTGGAATTGGGGTTGCGGTTTGTGATCCTAAGGATAATCTGTTGTTTGAGAAGATGAGTCCTATAGAATCTATGGTGGAAGGTAAAGAAACCAGCAGCGAATGCGCTGAGCTTGAAGCGCTGGTTGAAGGTCTCAATGTTGCTCTTATTTTAGGCTTGAAAACTGTCACATTTTTCTGTGCTGATTACATGCTCTACCAGTATGTAAGTTGCTTCAACTGTTCATTCATCCCTCCTTTTAATGTCGATATATTATTCCATGGTTAGAGTCTAAGAAGCACGGATATATACATTTTTAAAAGAAGAAAATTCAAAGTAAATGCACTGATCTATTTATATGCTTCAAAAATTAGTTTGAGGTATTTCACAATCAAAATTGTTATTATTGTCATATATGCGACTTTTTTGTCTGCCAACAAATGTTCTATTCACATCTTCCACATTTGTTGTGCATTAGGCGTGTGATGTTAATAAGTGTTGGAGTGTCGGACACGGCTAGGACATAGATATGCAAGCCAAATTAAAGCGTTCGTGCTTCTTATGTTAGAGTTGTGTTGATTATTGTTCTTTGAATATGGTTCTCTGTCGGAAATCATTTAAGAGTGTTTGGGTATGAGAGTTTATTTGATTTACAATTCTCTGAGGAGATGCTTTTTTTGTGAACAGGAATGGTCTTTGAGAACATTAAGCAAATATTACTGTGAATGCTGAAAATACACCCAATTGAAGAGCCTTTGGAGCATAAAAATATGGCTAGTGAAAGTTATTGTCCTATCTTAAGCCATTGTCGCCACCTACTTAGATTTGATATAATCCTTCAAGTTAACTTGACAACCAATAGTAGGTGGAGTGTGCGAAGAGGATACTCTCGGATATAAAAAATTTAAAAAACAAACTCAGGGGTACTTAGATTAGTGCTTAAATAAAGAGCTCTGTTTAGAAGCCATAATAAACGTACAATCTGCAAGTTCCAAATGTGCCTAATAAACTAATAAGGTGGGTGGTATTGGTTTCTTACCAAAGAAAAATATTAATGAACATATAATAATATTAACAAGGCTGGTATGAACTTTTTATCTGCTGCATCATGATCTCCACTGTCCTTAGCAGTTGGCTGAATATATGAACGAGACTAGTAGTTTGAAGTCTTATGTTAGATTAATGTTTATACCCCATTTATTAATATATGAATTGCCAGCTTTTTCAATAAATCCTTGTGGACAAAAAAATATAAATAAATAAACATCTTTTGGTTTTCCTTCGAGTGATTTATCTTTGTTGACATCAAATGATCGTATTATCATTTTAATTTAATTGGATTGAGTGCATTGCAAACTCTAGCACCCAGTAATATTTGTCTCTTTTCTGACTTTTCATATCCGATATGAGAAAGGGATATAATAAAAAGTTATAATTTGATATCCTAATCCATGCTCTGTGGTTACAGCTTACAGGTAGGGTGCCTCCAGCAACAAGCTCCACGGAAAAATTGGTTAATGAGGTGGTTGTTCTTCAGGGAAAATTTACATACTGTAACCCATCTCTCGTGACACGTAATGATATCAAGTTTGCTTTCAAACTTGCAAGAGAGGCTATAGTTTCTCAAATCACCTGGCCTGCACAAGCTGAAAATGGAAAGTGCTTGAAGGAAGAAACTTGCACAATTTGCTTTGAAGATGTTAGTGTGGATCAGATGTTCTCAGTTGATGGTTGTTTGCACAGATACTGCTTTTCTTGTATGAAACAGCATGTAGAAGTAAGGTTGCTGAACGGGAATGGGATGCAGGCAAACTGTCCACATCAGGGTTGTACGTCTGAGCTTAATATTGAAAGCTGCGGAAAGTTCTTGGAACCTAAGGTGTTTGAGATTATGAGCCAAAGAATTAAGGAAGCTTCTGTGCCTGTTCAGGAGAAAGTTTATTGCCCCTATTCCAGGTGCTCAGCATTAATGTCCAAAACAGATCTGTTAAGATACACCGAGGCTTTTTATATTGATGCGGAACGAACTGGGGCAAGGAAGTGCATGAAATGTAATCAGTTTTTCTGTATAAATTGCAAGGTCGCTTGGCATTATAACCTGACTTGCTACGACCACAGAAAGTTGAATCCCAATCTCCATCCAGATGAGAAAATGCTGAAGTCTCTTGCAACAAGGAAACTTTGGCGCCAATGCATTGTGTGTAACAATATGGTTGAATTGGCGGAAGGCTGCTATCACATCACCTGCAGGTGCACTATTTAGCTTTATCTATCTCACTTGCTCCATTTTTTCCTGGATGAACTGCAAATTGAGCAAAAAAATTACAACAGTTAACTGCAATATTTCTACAGCACCCAATAAACATTAATGCAATTCACAAACTTCTACATTCTTGGAGGTTGAGTTAGGGAACAGTATCTGAAATAAAAGAGTGCTAAGATTAATAATGAAATGGATACTGAAAAACACCCGTCAAAGTTGGTTAGCTGCACTCTCAATTTGCTGGATATGGATTTGTCTTGTCAAATAAAACAATAATAATTGACATTTGATTTGTTGAGGTTAGGACAGTTTTTTATCTTGCGCTTTTATATTGCTGCAAGTTTCTTTTGTTCATTGGAGTTTTCTCTCTCCTTTTTTAAATGTTAATGGTTTCTGTTCGCAGATGTGGATATGAGTTTTGCTATACATGTGGAGCCCCCTGGAAAAATAAGAAACCTACATGTAAGTGTCCGATATGGGACGAGCGGAACATCATACATCGAAGATGAGCTTTAGCTTTTTAGGTGACAATCTGGGGGATACTTGCGCCCTTTCTTCTCCCCTTCTGTTTCTTTGCAAACTTTTGTAAGGTAGCCGAAGATAGTAGGGTATTTTGTGCAGTTGTCTAGTTGGTGACATACTGAAGTTAAATCACAGCTTTGTCGACTTTAAATGTCTCATTTTCTATCTTGCAAGACAACCTCAGTCAGGTTGGAACTGATGGAAGAATACAAGTATAGATAGTAAGTTTCTTTTTCATCACTTTTAGGTTTGACATGAAGAGTTACTCATGTACAGTTTTTTTGGTCCACAAATTTCTTGTGGTCAGGAAAATAGGTTTTTAATGACTTAGAACTTTGGAACTTTCGTGTTGTTTAATGCATTAGAACAGAACAACGATGCTCTTGTTATTCTTAAACTTATTTCAAGATTGTTTGTACATGGATGTGACTTGTCCAAAACCTCTTGCATCTTTAGAGAACATGATCCACAGCTTAAAAAAACAAAAGAAAGAAAAGGACACCTCTTTTGGAAAAATCATGGCCAAGATAT

mRNA sequence

ATGGCGGACACCATGAACGACGACGACTGCGTTCAGGATTTGATCACCCAACAGCGTTCCGAAATCCTTTCCGCCAAAACCCTTTTCTCTGATCTCGATTTCGCCTTCCAACTTCAACTCCAGGAGGCAATGGATGCCTCTCTTGCTTCTAAACCCTCCACCGACTCATCTTCCTCACTTAACACCCCCGACCCTGTCTTGGATTCTGAAGACACTAGCGGTTTAGACTTGGCTACCACTCTTATGCTCGAAGACATTGCGAGGTTTGCTATGGAGTTCAAGGACCGGGAGCAATGTCAGACTGAAATGAGGAAAATGAAGGAGGAGCTTGATCGTCGGATTCATGATCAGAAGTTTGCGGAATTTATTCGGAGTGTTCCTGAGAATGAGTGGAGGGAGTATGGGGATAATTATGAGAAGCCGTATGGTGAAAGTTCATCGTCTTCTTCTTCTTCTTCTTCTTCTTCCTGGAGTGTGGACTCTGAATGTTGTAGGGTGTATTCGAAGGGGTTGATTAGTGAAGAGAGGATTAGAGATATGGTGGTTAGGGTTGCTGGAATTGGGGTTGCGGTTTGTGATCCTAAGGATAATCTGTTGTTTGAGAAGATGAGTCCTATAGAATCTATGGTGGAAGGTAAAGAAACCAGCAGCGAATGCGCTGAGCTTGAAGCGCTGGTTGAAGGTCTCAATGTTGCTCTTATTTTAGGCTTGAAAACTGTCACATTTTTCTGTGCTGATTACATGCTCTACCAGTATCTTACAGGTAGGGTGCCTCCAGCAACAAGCTCCACGGAAAAATTGGTTAATGAGGTGGTTGTTCTTCAGGGAAAATTTACATACTGTAACCCATCTCTCGTGACACGTAATGATATCAAGTTTGCTTTCAAACTTGCAAGAGAGGCTATAGTTTCTCAAATCACCTGGCCTGCACAAGCTGAAAATGGAAAGTGCTTGAAGGAAGAAACTTGCACAATTTGCTTTGAAGATGTTAGTGTGGATCAGATGTTCTCAGTTGATGGTTGTTTGCACAGATACTGCTTTTCTTGTATGAAACAGCATGTAGAAGTAAGGTTGCTGAACGGGAATGGGATGCAGGCAAACTGTCCACATCAGGGTTGTACGTCTGAGCTTAATATTGAAAGCTGCGGAAAGTTCTTGGAACCTAAGGTGTTTGAGATTATGAGCCAAAGAATTAAGGAAGCTTCTGTGCCTGTTCAGGAGAAAGTTTATTGCCCCTATTCCAGGTGCTCAGCATTAATGTCCAAAACAGATCTGTTAAGATACACCGAGGCTTTTTATATTGATGCGGAACGAACTGGGGCAAGGAAGTGCATGAAATGTAATCAGTTTTTCTGTATAAATTGCAAGGTCGCTTGGCATTATAACCTGACTTGCTACGACCACAGAAAGTTGAATCCCAATCTCCATCCAGATGAGAAAATGCTGAAGTCTCTTGCAACAAGGAAACTTTGGCGCCAATGCATTGTGTGTAACAATATGGTTGAATTGGCGGAAGGCTGCTATCACATCACCTGCAGCACCCAATAA

Coding sequence (CDS)

ATGGCGGACACCATGAACGACGACGACTGCGTTCAGGATTTGATCACCCAACAGCGTTCCGAAATCCTTTCCGCCAAAACCCTTTTCTCTGATCTCGATTTCGCCTTCCAACTTCAACTCCAGGAGGCAATGGATGCCTCTCTTGCTTCTAAACCCTCCACCGACTCATCTTCCTCACTTAACACCCCCGACCCTGTCTTGGATTCTGAAGACACTAGCGGTTTAGACTTGGCTACCACTCTTATGCTCGAAGACATTGCGAGGTTTGCTATGGAGTTCAAGGACCGGGAGCAATGTCAGACTGAAATGAGGAAAATGAAGGAGGAGCTTGATCGTCGGATTCATGATCAGAAGTTTGCGGAATTTATTCGGAGTGTTCCTGAGAATGAGTGGAGGGAGTATGGGGATAATTATGAGAAGCCGTATGGTGAAAGTTCATCGTCTTCTTCTTCTTCTTCTTCTTCTTCCTGGAGTGTGGACTCTGAATGTTGTAGGGTGTATTCGAAGGGGTTGATTAGTGAAGAGAGGATTAGAGATATGGTGGTTAGGGTTGCTGGAATTGGGGTTGCGGTTTGTGATCCTAAGGATAATCTGTTGTTTGAGAAGATGAGTCCTATAGAATCTATGGTGGAAGGTAAAGAAACCAGCAGCGAATGCGCTGAGCTTGAAGCGCTGGTTGAAGGTCTCAATGTTGCTCTTATTTTAGGCTTGAAAACTGTCACATTTTTCTGTGCTGATTACATGCTCTACCAGTATCTTACAGGTAGGGTGCCTCCAGCAACAAGCTCCACGGAAAAATTGGTTAATGAGGTGGTTGTTCTTCAGGGAAAATTTACATACTGTAACCCATCTCTCGTGACACGTAATGATATCAAGTTTGCTTTCAAACTTGCAAGAGAGGCTATAGTTTCTCAAATCACCTGGCCTGCACAAGCTGAAAATGGAAAGTGCTTGAAGGAAGAAACTTGCACAATTTGCTTTGAAGATGTTAGTGTGGATCAGATGTTCTCAGTTGATGGTTGTTTGCACAGATACTGCTTTTCTTGTATGAAACAGCATGTAGAAGTAAGGTTGCTGAACGGGAATGGGATGCAGGCAAACTGTCCACATCAGGGTTGTACGTCTGAGCTTAATATTGAAAGCTGCGGAAAGTTCTTGGAACCTAAGGTGTTTGAGATTATGAGCCAAAGAATTAAGGAAGCTTCTGTGCCTGTTCAGGAGAAAGTTTATTGCCCCTATTCCAGGTGCTCAGCATTAATGTCCAAAACAGATCTGTTAAGATACACCGAGGCTTTTTATATTGATGCGGAACGAACTGGGGCAAGGAAGTGCATGAAATGTAATCAGTTTTTCTGTATAAATTGCAAGGTCGCTTGGCATTATAACCTGACTTGCTACGACCACAGAAAGTTGAATCCCAATCTCCATCCAGATGAGAAAATGCTGAAGTCTCTTGCAACAAGGAAACTTTGGCGCCAATGCATTGTGTGTAACAATATGGTTGAATTGGCGGAAGGCTGCTATCACATCACCTGCAGCACCCAATAA

Protein sequence

MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSLNTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFAEFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDMVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITCSTQ*

Homology

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BLAST of CsaV3_1G013060 vs. NCBI nr
Match: KAE8652740.1 (hypothetical protein Csa_013977 [Cucumis sativus])

HSP 1 Score: 1036.9 bits (2680), Expect = 5.7e-299
Identity = 515/515 (100.00%), Postives = 515/515 (100.00%), Query Frame = 0


Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL
Sbjct: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA
Sbjct: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM 180
           EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM
Sbjct: 121 EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM 180

Query: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240
           VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV
Sbjct: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240

Query: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300
           TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE
Sbjct: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300

Query: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360
           AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN
Sbjct: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360

Query: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420
           GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM
Sbjct: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420

Query: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480
           SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK
Sbjct: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480

Query: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITCSTQ 516
           MLKSLATRKLWRQCIVCNNMVELAEGCYHITCSTQ
Sbjct: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITCSTQ 515

[Close]

BLAST of CsaV3_1G013060 vs. NCBI nr
Match: XP_004147300.2 (uncharacterized protein LOC101222498 [Cucumis sativus])

HSP 1 Score: 1031.2 bits (2665), Expect = 3.1e-297
Identity = 512/512 (100.00%), Postives = 512/512 (100.00%), Query Frame = 0


Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL
Sbjct: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA
Sbjct: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM 180
           EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM
Sbjct: 121 EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM 180

Query: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240
           VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV
Sbjct: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240

Query: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300
           TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE
Sbjct: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300

Query: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360
           AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN
Sbjct: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360

Query: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420
           GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM
Sbjct: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420

Query: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480
           SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK
Sbjct: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480

Query: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           MLKSLATRKLWRQCIVCNNMVELAEGCYHITC
Sbjct: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 512

[Close]

BLAST of CsaV3_1G013060 vs. NCBI nr
Match: XP_008463535.1 (PREDICTED: uncharacterized protein LOC103501665 [Cucumis melo] >KAA0051924.1 putative E3 ubiquitin-protein ligase rbrA [Cucumis melo var. makuwa] >TYK12238.1 putative E3 ubiquitin-protein ligase rbrA [Cucumis melo var. makuwa])

HSP 1 Score: 965.7 bits (2495), Expect = 1.6e-277
Identity = 478/512 (93.36%), Postives = 498/512 (97.27%), Query Frame = 0


Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADT+NDDDCVQ+LITQQRSE+LSAKTLFSDLD+AFQLQLQEAMDASL S PS +SSSSL
Sbjct: 1   MADTLNDDDCVQELITQQRSELLSAKTLFSDLDYAFQLQLQEAMDASLTSIPSIESSSSL 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           NT DPVLDSE+TSGLDLATTLMLEDIARFAMEFKDRE CQTEMRKMKEELDRRIHDQKFA
Sbjct: 61  NTADPVLDSEETSGLDLATTLMLEDIARFAMEFKDREHCQTEMRKMKEELDRRIHDQKFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM 180
           E+IRSVPENEWREYGDNYEKPYGE  SSSSSSSSSSW+VDSEC RVYSKGLISEERIRD 
Sbjct: 121 EYIRSVPENEWREYGDNYEKPYGE--SSSSSSSSSSWNVDSECFRVYSKGLISEERIRDT 180

Query: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240
           VVRVAGIG+AVCDPKDNLLFEKMSPIESMVEGKETS+ECAELEALVEGLNVALILGLK++
Sbjct: 181 VVRVAGIGIAVCDPKDNLLFEKMSPIESMVEGKETSNECAELEALVEGLNVALILGLKSI 240

Query: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300
           TFFCADYMLYQYLTGRVPPATSST KLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE
Sbjct: 241 TFFCADYMLYQYLTGRVPPATSSTAKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300

Query: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360
           AIVSQITWPA+A+NG CLK ETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEV+LLN
Sbjct: 301 AIVSQITWPAEADNGNCLK-ETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVKLLN 360

Query: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420
           GNGMQANCPHQGCTSE+NIESCGKFLEPKVFEIMSQRIKEASVP+QEKVYCPYSRCSALM
Sbjct: 361 GNGMQANCPHQGCTSEVNIESCGKFLEPKVFEIMSQRIKEASVPIQEKVYCPYSRCSALM 420

Query: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480
           SKT+LLRYTEA YIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYD+R LNPNLHPDE+
Sbjct: 421 SKTELLRYTEASYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDYRNLNPNLHPDEQ 480

Query: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           MLKSLATRKLWRQCIVCNNMVELAEGCYHITC
Sbjct: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 509

[Close]

BLAST of CsaV3_1G013060 vs. NCBI nr
Match: XP_038893965.1 (uncharacterized protein LOC120082751 [Benincasa hispida])

HSP 1 Score: 904.0 bits (2335), Expect = 5.7e-259
Identity = 453/512 (88.48%), Postives = 479/512 (93.55%), Query Frame = 0


Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADTM DDD +QDLITQQRSE+LSAKTLFSDLDFAFQLQLQEAM+ASLASKPST+ SSSL
Sbjct: 1   MADTM-DDDSIQDLITQQRSELLSAKTLFSDLDFAFQLQLQEAMNASLASKPSTEPSSSL 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           NT  PVLDSE+T  LDLATTLMLEDIARFAMEFKDREQC  EMRKMKEELDRR+HDQKFA
Sbjct: 61  NTAVPVLDSEETGALDLATTLMLEDIARFAMEFKDREQCHNEMRKMKEELDRRVHDQKFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM 180
           E+IR+VPENEWR+YGDNYEKPYGESSSSSSS SS S SVDSEC RVYSKGLISEERIRDM
Sbjct: 121 EYIRNVPENEWRKYGDNYEKPYGESSSSSSSCSSPS-SVDSECFRVYSKGLISEERIRDM 180

Query: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240
           VVRVAGIGVAVCDPKDNLLFEK SP+ESMV+ KETSS+CAELEALVEGLNVALILGL+ V
Sbjct: 181 VVRVAGIGVAVCDPKDNLLFEKTSPLESMVDSKETSSQCAELEALVEGLNVALILGLRNV 240

Query: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300
           TFFC DYMLYQYLTGRV P  SS  KLVNEVV+LQGKFTYCNPSLVTRNDIKFAF+LARE
Sbjct: 241 TFFCGDYMLYQYLTGRVLPGASSMAKLVNEVVLLQGKFTYCNPSLVTRNDIKFAFRLARE 300

Query: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360
           AIVSQITWPA+AENGKCLK ETCTICFEDV VDQMF VDGCLHRYCFSCMKQHVEVRLLN
Sbjct: 301 AIVSQITWPAEAENGKCLK-ETCTICFEDVRVDQMFLVDGCLHRYCFSCMKQHVEVRLLN 360

Query: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420
           GNGMQANCPHQGC SE+NIESCGKFLEPKVFEIMSQRIKEASVP+ EKVYCPYSRCS LM
Sbjct: 361 GNGMQANCPHQGCASEINIESCGKFLEPKVFEIMSQRIKEASVPLLEKVYCPYSRCSELM 420

Query: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480
           SKT+LLRYTE  YIDA+R+GARKCMKCN+FFCINCKVAWHYNLTCYD RKLNPNL  DEK
Sbjct: 421 SKTELLRYTEDSYIDAKRSGARKCMKCNRFFCINCKVAWHYNLTCYDFRKLNPNLRSDEK 480

Query: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           MLKSLA++KLWRQC++CNNMVELAEGCYHITC
Sbjct: 481 MLKSLASQKLWRQCVMCNNMVELAEGCYHITC 509

[Close]

BLAST of CsaV3_1G013060 vs. NCBI nr
Match: XP_022157931.1 (uncharacterized protein LOC111024540 [Momordica charantia])

HSP 1 Score: 849.7 bits (2194), Expect = 1.3e-242
Identity = 424/516 (82.17%), Postives = 463/516 (89.73%), Query Frame = 0


Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADTM+DDD +Q+++++QRSE+L+AKTLFSDLD AFQLQLQEAM+ASL SKPST  S S 
Sbjct: 1   MADTMDDDDYLQEVVSEQRSELLAAKTLFSDLDLAFQLQLQEAMNASLDSKPSTQPSPSR 60

Query: 61  NTPDPVLDSED-TSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKF 120
           N   P L+SED +S LDLATTLMLEDIARFAMEFKDREQC TEMRKMKEELDRRIHDQ F
Sbjct: 61  NRVVPKLESEDSSSALDLATTLMLEDIARFAMEFKDREQCHTEMRKMKEELDRRIHDQNF 120

Query: 121 AEFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWS---VDSECCRVYSKGLISEER 180
           A +IR+VPE+EWR YGDNYEKPY  SS SSSSSSSSS +   +DSE  RVYSKGLISEER
Sbjct: 121 ATYIRNVPEDEWRRYGDNYEKPYSGSSGSSSSSSSSSPARVCLDSEIFRVYSKGLISEER 180

Query: 181 IRDMVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILG 240
           IRDM VRVA IGVAVCDPKDNLLFEKM P+ES+V+GKE +SECAELEALVEGLNVALILG
Sbjct: 181 IRDMKVRVAAIGVAVCDPKDNLLFEKMMPLESVVDGKEINSECAELEALVEGLNVALILG 240

Query: 241 LKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFK 300
           LK VTFFCADYMLYQYLTGRVPP  SS   LVNEV++LQ +FTYCNPSLVTRND+KFAFK
Sbjct: 241 LKNVTFFCADYMLYQYLTGRVPPGASSLATLVNEVILLQRRFTYCNPSLVTRNDMKFAFK 300

Query: 301 LAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEV 360
           LAREAIVSQITWP +A NGKCLK+ETC ICFEDV VDQMFSVDGCLHRYCFSCMKQHVEV
Sbjct: 301 LAREAIVSQITWPTEAGNGKCLKKETCIICFEDVRVDQMFSVDGCLHRYCFSCMKQHVEV 360

Query: 361 RLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRC 420
           RLLNGNGM+ NCPHQGCTS +NIESCGKFLEPKV EIMSQRIKEASVP+ EKVYCPYSRC
Sbjct: 361 RLLNGNGMKVNCPHQGCTSGINIESCGKFLEPKVIEIMSQRIKEASVPILEKVYCPYSRC 420

Query: 421 SALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLH 480
           SALMSK++LL+YTEA +I AE++GARKCMKCNQFFCINCKV WHYNLTCYD+RK NPN  
Sbjct: 421 SALMSKSELLKYTEASFIGAEQSGARKCMKCNQFFCINCKVPWHYNLTCYDYRKSNPNPR 480

Query: 481 PDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           PDE MLKSLA+RKLWRQC+ CNNMVELAEGCYHITC
Sbjct: 481 PDETMLKSLASRKLWRQCVKCNNMVELAEGCYHITC 516

[Close]

BLAST of CsaV3_1G013060 vs. ExPASy Swiss-Prot
Match: P0CE10 (ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01020 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.6e-12
Identity = 48/195 (24.62%), Postives = 83/195 (42.56%), Query Frame = 0


Query: 320  EETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNI 379
            E  C IC  +  VD  +S++GC H +C +C+ +  E  + N +     C H  C + + +
Sbjct: 1558 ELECPICLSE--VDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVV 1617

Query: 380  ESCGKFL-EPKVFEIMSQRIKEASVPVQEKV-YCPYSRCSALMSKTDLLRYTEAFYIDAE 439
                  L + K+ E++S  +         K+ +C    C ++          E F     
Sbjct: 1618 ADMRALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFI---- 1677

Query: 440  RTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVC 499
                  C  C+   C  C + +H  +TC  ++K   N  PD   LK  A  K  ++C +C
Sbjct: 1678 ------CGACHSETCTRCHLEYHPLITCERYKKFKEN--PD-LSLKDWAKGKDVKECPIC 1737

Query: 500  NNMVELAEGCYHITC 513
             + +E  +GC H+ C
Sbjct: 1738 KSTIEKTDGCNHLQC 1737

[Close]

BLAST of CsaV3_1G013060 vs. ExPASy Swiss-Prot
Match: F4KGU4 (ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g10370 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 9.9e-12
Identity = 48/195 (24.62%), Postives = 81/195 (41.54%), Query Frame = 0


Query: 320  EETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNI 379
            E  C IC  +  VD  +S++GC H +C +C+ +  E  + N +     C H  C + + +
Sbjct: 1561 EVECPICLSE--VDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVL 1620

Query: 380  ESCGKFL-EPKVFEIMSQRIKEASVPVQEKV-YCPYSRCSALMSKTDLLRYTEAFYIDAE 439
                  L + K+ E+ S  +         K  +C    C ++          E F     
Sbjct: 1621 ADMRALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESGEPFI---- 1680

Query: 440  RTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVC 499
                  C  C+   C  C + +H  +TC  ++K   N  PD   LK  A  K  ++C +C
Sbjct: 1681 ------CGACHSEICTRCHLEYHPLITCERYKKFKEN--PD-LSLKDWAKGKNVKECPIC 1740

Query: 500  NNMVELAEGCYHITC 513
             + +E  +GC H+ C
Sbjct: 1741 KSTIEKTDGCNHMKC 1740

[Close]

BLAST of CsaV3_1G013060 vs. ExPASy Swiss-Prot
Match: A4IIY1 (Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis OX=8364 GN=rnf144a PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.4e-10
Identity = 44/196 (22.45%), Postives = 79/196 (40.31%), Query Frame = 0


Query: 322 TCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIES 381
           +C +C  + +V+QM ++  C   +C  C+KQ+VE+ +  G     +CP   C    +++ 
Sbjct: 19  SCKLCLGEYTVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDASCPKRGHLQE 78

Query: 382 CGKFLEPKVFEIMSQRIKEASVPVQE-----KVYCPYSRCSALMSKTDLLRYTEAFYIDA 441
               +E  V   + Q+ K+     +      + +CP S C A+    +            
Sbjct: 79  --NEIECMVAAEIMQKYKKLQFEKEILLDPCRTWCPSSSCQAVCKLQEK---------GI 138

Query: 442 ERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIV 501
           +     +C  C+  FC  CK  WH    C ++  +           KSL      ++C  
Sbjct: 139 QNPQLVQCSACDIEFCSACKANWHPGQGCPENMAITFLPGDSSSFFKSLEDDVPIKRCPK 198

Query: 502 CNNMVELAEGCYHITC 513
           C   +E  EGC  + C
Sbjct: 199 CKVYIERDEGCAQMMC 203

[Close]

BLAST of CsaV3_1G013060 vs. ExPASy Swiss-Prot
Match: Q9LVW9 (Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana OX=3702 GN=ARI4 PE=5 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 1.2e-04
Identity = 43/197 (21.83%), Postives = 76/197 (38.58%), Query Frame = 0


Query: 319 KEETCTICF-EDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSEL 378
           K   C IC  ED+S   M  ++ C HR+C  C K+H  VR+  G G +  C    C +  
Sbjct: 115 KTMKCDICMEEDLSKYAMTRME-CGHRFCNDCWKEHFTVRINEGEGKRIRCMAYKCNT-- 174

Query: 379 NIESCGKFLEPKVFEIMSQRIKEASVPVQEKV-YCPYS-RCSALMSKTDLLRYTEAFYID 438
             +   + +  ++ E   + + E+ V     V +CP +  C   +              D
Sbjct: 175 ICDEARQLVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIK----------D 234

Query: 439 AERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCI 498
                  +C  C   FC +C    H   +C   +        + + +  +      + C 
Sbjct: 235 DGDVDEVEC-SCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWMTVNT--KLCP 294

Query: 499 VCNNMVELAEGCYHITC 513
            C+  ++  +GC H+TC
Sbjct: 295 KCSKPIQKRDGCNHMTC 295

[Close]

BLAST of CsaV3_1G013060 vs. ExPASy TrEMBL
Match: A0A0A0LXM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G088460 PE=3 SV=1)

HSP 1 Score: 1031.2 bits (2665), Expect = 1.5e-297
Identity = 512/512 (100.00%), Postives = 512/512 (100.00%), Query Frame = 0


Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL
Sbjct: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA
Sbjct: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM 180
           EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM
Sbjct: 121 EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM 180

Query: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240
           VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV
Sbjct: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240

Query: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300
           TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE
Sbjct: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300

Query: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360
           AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN
Sbjct: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360

Query: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420
           GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM
Sbjct: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420

Query: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480
           SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK
Sbjct: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480

Query: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           MLKSLATRKLWRQCIVCNNMVELAEGCYHITC
Sbjct: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 512

[Close]

BLAST of CsaV3_1G013060 vs. ExPASy TrEMBL
Match: A0A5A7U9A4 (Putative E3 ubiquitin-protein ligase rbrA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00460 PE=3 SV=1)

HSP 1 Score: 965.7 bits (2495), Expect = 7.8e-278
Identity = 478/512 (93.36%), Postives = 498/512 (97.27%), Query Frame = 0


Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADT+NDDDCVQ+LITQQRSE+LSAKTLFSDLD+AFQLQLQEAMDASL S PS +SSSSL
Sbjct: 1   MADTLNDDDCVQELITQQRSELLSAKTLFSDLDYAFQLQLQEAMDASLTSIPSIESSSSL 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           NT DPVLDSE+TSGLDLATTLMLEDIARFAMEFKDRE CQTEMRKMKEELDRRIHDQKFA
Sbjct: 61  NTADPVLDSEETSGLDLATTLMLEDIARFAMEFKDREHCQTEMRKMKEELDRRIHDQKFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM 180
           E+IRSVPENEWREYGDNYEKPYGE  SSSSSSSSSSW+VDSEC RVYSKGLISEERIRD 
Sbjct: 121 EYIRSVPENEWREYGDNYEKPYGE--SSSSSSSSSSWNVDSECFRVYSKGLISEERIRDT 180

Query: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240
           VVRVAGIG+AVCDPKDNLLFEKMSPIESMVEGKETS+ECAELEALVEGLNVALILGLK++
Sbjct: 181 VVRVAGIGIAVCDPKDNLLFEKMSPIESMVEGKETSNECAELEALVEGLNVALILGLKSI 240

Query: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300
           TFFCADYMLYQYLTGRVPPATSST KLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE
Sbjct: 241 TFFCADYMLYQYLTGRVPPATSSTAKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300

Query: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360
           AIVSQITWPA+A+NG CLK ETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEV+LLN
Sbjct: 301 AIVSQITWPAEADNGNCLK-ETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVKLLN 360

Query: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420
           GNGMQANCPHQGCTSE+NIESCGKFLEPKVFEIMSQRIKEASVP+QEKVYCPYSRCSALM
Sbjct: 361 GNGMQANCPHQGCTSEVNIESCGKFLEPKVFEIMSQRIKEASVPIQEKVYCPYSRCSALM 420

Query: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480
           SKT+LLRYTEA YIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYD+R LNPNLHPDE+
Sbjct: 421 SKTELLRYTEASYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDYRNLNPNLHPDEQ 480

Query: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           MLKSLATRKLWRQCIVCNNMVELAEGCYHITC
Sbjct: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 509

[Close]

BLAST of CsaV3_1G013060 vs. ExPASy TrEMBL
Match: A0A1S3CJH8 (uncharacterized protein LOC103501665 OS=Cucumis melo OX=3656 GN=LOC103501665 PE=3 SV=1)

HSP 1 Score: 965.7 bits (2495), Expect = 7.8e-278
Identity = 478/512 (93.36%), Postives = 498/512 (97.27%), Query Frame = 0


Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADT+NDDDCVQ+LITQQRSE+LSAKTLFSDLD+AFQLQLQEAMDASL S PS +SSSSL
Sbjct: 1   MADTLNDDDCVQELITQQRSELLSAKTLFSDLDYAFQLQLQEAMDASLTSIPSIESSSSL 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           NT DPVLDSE+TSGLDLATTLMLEDIARFAMEFKDRE CQTEMRKMKEELDRRIHDQKFA
Sbjct: 61  NTADPVLDSEETSGLDLATTLMLEDIARFAMEFKDREHCQTEMRKMKEELDRRIHDQKFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDM 180
           E+IRSVPENEWREYGDNYEKPYGE  SSSSSSSSSSW+VDSEC RVYSKGLISEERIRD 
Sbjct: 121 EYIRSVPENEWREYGDNYEKPYGE--SSSSSSSSSSWNVDSECFRVYSKGLISEERIRDT 180

Query: 181 VVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTV 240
           VVRVAGIG+AVCDPKDNLLFEKMSPIESMVEGKETS+ECAELEALVEGLNVALILGLK++
Sbjct: 181 VVRVAGIGIAVCDPKDNLLFEKMSPIESMVEGKETSNECAELEALVEGLNVALILGLKSI 240

Query: 241 TFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300
           TFFCADYMLYQYLTGRVPPATSST KLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE
Sbjct: 241 TFFCADYMLYQYLTGRVPPATSSTAKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLARE 300

Query: 301 AIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLN 360
           AIVSQITWPA+A+NG CLK ETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEV+LLN
Sbjct: 301 AIVSQITWPAEADNGNCLK-ETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVKLLN 360

Query: 361 GNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALM 420
           GNGMQANCPHQGCTSE+NIESCGKFLEPKVFEIMSQRIKEASVP+QEKVYCPYSRCSALM
Sbjct: 361 GNGMQANCPHQGCTSEVNIESCGKFLEPKVFEIMSQRIKEASVPIQEKVYCPYSRCSALM 420

Query: 421 SKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEK 480
           SKT+LLRYTEA YIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYD+R LNPNLHPDE+
Sbjct: 421 SKTELLRYTEASYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDYRNLNPNLHPDEQ 480

Query: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           MLKSLATRKLWRQCIVCNNMVELAEGCYHITC
Sbjct: 481 MLKSLATRKLWRQCIVCNNMVELAEGCYHITC 509

[Close]

BLAST of CsaV3_1G013060 vs. ExPASy TrEMBL
Match: A0A6J1DZJ9 (uncharacterized protein LOC111024540 OS=Momordica charantia OX=3673 GN=LOC111024540 PE=3 SV=1)

HSP 1 Score: 849.7 bits (2194), Expect = 6.2e-243
Identity = 424/516 (82.17%), Postives = 463/516 (89.73%), Query Frame = 0


Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADTM+DDD +Q+++++QRSE+L+AKTLFSDLD AFQLQLQEAM+ASL SKPST  S S 
Sbjct: 1   MADTMDDDDYLQEVVSEQRSELLAAKTLFSDLDLAFQLQLQEAMNASLDSKPSTQPSPSR 60

Query: 61  NTPDPVLDSED-TSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKF 120
           N   P L+SED +S LDLATTLMLEDIARFAMEFKDREQC TEMRKMKEELDRRIHDQ F
Sbjct: 61  NRVVPKLESEDSSSALDLATTLMLEDIARFAMEFKDREQCHTEMRKMKEELDRRIHDQNF 120

Query: 121 AEFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWS---VDSECCRVYSKGLISEER 180
           A +IR+VPE+EWR YGDNYEKPY  SS SSSSSSSSS +   +DSE  RVYSKGLISEER
Sbjct: 121 ATYIRNVPEDEWRRYGDNYEKPYSGSSGSSSSSSSSSPARVCLDSEIFRVYSKGLISEER 180

Query: 181 IRDMVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILG 240
           IRDM VRVA IGVAVCDPKDNLLFEKM P+ES+V+GKE +SECAELEALVEGLNVALILG
Sbjct: 181 IRDMKVRVAAIGVAVCDPKDNLLFEKMMPLESVVDGKEINSECAELEALVEGLNVALILG 240

Query: 241 LKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFK 300
           LK VTFFCADYMLYQYLTGRVPP  SS   LVNEV++LQ +FTYCNPSLVTRND+KFAFK
Sbjct: 241 LKNVTFFCADYMLYQYLTGRVPPGASSLATLVNEVILLQRRFTYCNPSLVTRNDMKFAFK 300

Query: 301 LAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEV 360
           LAREAIVSQITWP +A NGKCLK+ETC ICFEDV VDQMFSVDGCLHRYCFSCMKQHVEV
Sbjct: 301 LAREAIVSQITWPTEAGNGKCLKKETCIICFEDVRVDQMFSVDGCLHRYCFSCMKQHVEV 360

Query: 361 RLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRC 420
           RLLNGNGM+ NCPHQGCTS +NIESCGKFLEPKV EIMSQRIKEASVP+ EKVYCPYSRC
Sbjct: 361 RLLNGNGMKVNCPHQGCTSGINIESCGKFLEPKVIEIMSQRIKEASVPILEKVYCPYSRC 420

Query: 421 SALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLH 480
           SALMSK++LL+YTEA +I AE++GARKCMKCNQFFCINCKV WHYNLTCYD+RK NPN  
Sbjct: 421 SALMSKSELLKYTEASFIGAEQSGARKCMKCNQFFCINCKVPWHYNLTCYDYRKSNPNPR 480

Query: 481 PDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           PDE MLKSLA+RKLWRQC+ CNNMVELAEGCYHITC
Sbjct: 481 PDETMLKSLASRKLWRQCVKCNNMVELAEGCYHITC 516

[Close]

BLAST of CsaV3_1G013060 vs. ExPASy TrEMBL
Match: A0A6J1HMI1 (uncharacterized protein LOC111464930 OS=Cucurbita moschata OX=3662 GN=LOC111464930 PE=3 SV=1)

HSP 1 Score: 819.7 bits (2116), Expect = 6.9e-234
Identity = 409/519 (78.81%), Postives = 456/519 (87.86%), Query Frame = 0


Query: 1   MADTMNDDDCVQDLITQQRSEILSAKTLFSDLDFAFQLQLQEAMDASLASKPSTDSSSSL 60
           MADT+ DDD +QDLIT+QRSEIL+AKTL SDLD A+QLQ+QEAM+ASL SK S+   +++
Sbjct: 1   MADTV-DDDYLQDLITEQRSEILAAKTLISDLDLAYQLQMQEAMNASLGSKSSSKGPATV 60

Query: 61  NTPDPVLDSEDTSGLDLATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFA 120
           N   PVL+SE+T  LD ATTL+LEDIAR AME KDREQCQ EMRKMKEELDRRIHDQ FA
Sbjct: 61  NRVVPVLESEETGALDFATTLLLEDIARIAMEHKDREQCQAEMRKMKEELDRRIHDQNFA 120

Query: 121 EFIRSVPENEWREYGDNYEKPYGESSSSSSSSSSSSWSV-------DSECCRVYSKGLIS 180
            +I +VP++EW +YGDNYEKPYGES SSSSSSSSSS SV       DSEC RVYSKGLIS
Sbjct: 121 NYILNVPDDEWSKYGDNYEKPYGESYSSSSSSSSSSSSVASSRGLLDSECFRVYSKGLIS 180

Query: 181 EERIRDMVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVAL 240
           EERIRDM VRVAGIGVAVCDPKDNLLFEK  P+ES+V+GKETS ECAELEALVEGL++AL
Sbjct: 181 EERIRDMTVRVAGIGVAVCDPKDNLLFEKTRPLESVVDGKETSCECAELEALVEGLHIAL 240

Query: 241 ILGLKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKF 300
           +LGLK VTFFCADYMLYQY+   V P +SS   LVNEV +LQGKFTYCNPSLVTRNDIKF
Sbjct: 241 VLGLKKVTFFCADYMLYQYIIRSVAPGSSSMATLVNEVSLLQGKFTYCNPSLVTRNDIKF 300

Query: 301 AFKLAREAIVSQITWPAQAENGKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQH 360
           AF+LAREAIVSQITWPA++ENGKCLK ETCTICFEDV VDQMFSVDGCLHRYCFSCMKQ 
Sbjct: 301 AFRLAREAIVSQITWPAESENGKCLK-ETCTICFEDVCVDQMFSVDGCLHRYCFSCMKQD 360

Query: 361 VEVRLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPY 420
           +E+RLLNGNGMQANCPH GCTSE+NIESCGKFL+ +V EI+SQRIKEAS+PV EKVYCPY
Sbjct: 361 LEIRLLNGNGMQANCPHLGCTSEINIESCGKFLDSRVIEIISQRIKEASMPVLEKVYCPY 420

Query: 421 SRCSALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNP 480
           SRCSALMSK++LL+Y+EA Y DAERTGARKCMKCN FFCINCK  WHYN+TCYD RKLNP
Sbjct: 421 SRCSALMSKSELLKYSEASYFDAERTGARKCMKCNLFFCINCKAPWHYNMTCYDFRKLNP 480

Query: 481 NLHPDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
            L PDE+MLKSLA++KLWRQC+ CN MVELAEGCYHITC
Sbjct: 481 VLRPDEEMLKSLASKKLWRQCVTCNTMVELAEGCYHITC 517

[Close]

BLAST of CsaV3_1G013060 vs. TAIR 10
Match: AT5G60250.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 323.9 bits (829), Expect = 2.3e-88
Identity = 188/498 (37.75%), Postives = 280/498 (56.22%), Query Frame = 0


Query: 31  DLDFAFQLQLQEAMDASLASK---PSTDSSSSL----------NTPDPVLDSEDTSGLDL 90
           D ++AF+LQ++EA+ ASL+S+   P    S  +          N P+    ++ +SG   
Sbjct: 4   DSEYAFRLQMEEALAASLSSQSRTPQRPPSPPIVATCGVLIVENNPNDSKTAKTSSGYGF 63

Query: 91  ATTLMLEDIARFAMEFKDREQCQTEMRKMKEELDRRIHDQKFAEF-IRSVPENEWREYGD 150
                  D  R       + + +T         D R  +         S      +    
Sbjct: 64  -------DFKRAVGGGNSKAKGKTHESVTGVRTDERNPNIGLGNSRSTSTGHGNTKPLPQ 123

Query: 151 NYEKPYGESSSSSSSSSSSSWSVDSECC-RVYSKGLISEERIR-DMVVRVAGIGVAVCDP 210
              +P       SS  ++++  ++     R+Y KGL+S+E  +  M   V+G GVA+CD 
Sbjct: 124 ETVRPAQLVGEGSSRVNTAAGKINGNLLYRLYFKGLVSDENGKGKMTDVVSGFGVAICDQ 183

Query: 211 KDNLLFEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTVTFFCADYMLYQYLT 270
           +DNLLFE   P+         S + AEL+AL+ GL  AL LG+K + FFC  Y ++QY+T
Sbjct: 184 RDNLLFEMKGPLID----NGMSRQGAELKALIRGLTEALKLGIKHIVFFCDSYPIFQYVT 243

Query: 271 GRVPPATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLAREAIVSQITWPAQAEN 330
           G+          L++++  +   F+     LV RND+KFA+KLARE+I+S +T       
Sbjct: 244 GKWMAKQKKISLLLDDLQSIMQHFSSYQHVLVARNDVKFAYKLARESILSMVTPHEDPRQ 303

Query: 331 GKCLKEETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCT 390
            K + +E C ICF D+  + MFSVD C HR+CF C+KQHVEV+LL  +GM   CPH GC 
Sbjct: 304 AKAVLKEECAICFNDIVAEGMFSVDKCRHRFCFQCVKQHVEVKLL--HGMAPKCPHDGCK 363

Query: 391 SELNIESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALMSKTDLLRYTEAFYI 450
           SEL I++CGK L PK+ ++  QR++E ++PV E+VYCPY RCSALMSKT +    ++   
Sbjct: 364 SELVIDACGKLLTPKLSKLWQQRLQENAIPVTERVYCPYPRCSALMSKTKISESAKSLLS 423

Query: 451 DAERTGARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQC 510
              ++G R+C++C   FC++CKV WH NL+C +++KL+P    D+  LKSLA  K+WRQC
Sbjct: 424 LYPKSGVRRCVECRGLFCVDCKVPWHGNLSCTEYKKLHPEPPADDVKLKSLANNKMWRQC 483

Query: 511 IVCNNMVELAEGCYHITC 513
             C +M+EL++GC HITC
Sbjct: 484 GKCQHMIELSQGCNHITC 488

[Close]

BLAST of CsaV3_1G013060 vs. TAIR 10
Match: AT2G25370.1 (RING/U-box superfamily protein )

HSP 1 Score: 273.1 bits (697), Expect = 4.6e-73
Identity = 153/369 (41.46%), Postives = 219/369 (59.35%), Query Frame = 0


Query: 146 SSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDMVVRV--AGIGVAVCDPKDNLLFEKM 205
           +S    SS ++  +D+   R+  KGL++ E + D V +   AG GVA+CD KDNLL E  
Sbjct: 136 NSKGEGSSPAAKFMDNVVYRLCFKGLVNYEAVADDVEKAVKAGFGVAICDEKDNLLHE-- 195

Query: 206 SPIESMVEGKETSSECAELEALVEGLNVALILGLKTVTFFCADYMLYQYLTGRVPPATSS 265
             I+  +   E S    E+ ALV GL+ +  LG++ V  +C D  +YQ + GR   +   
Sbjct: 196 --IKESLRDIEISRRGVEIMALVRGLSESFDLGMRNVVIYCDDDWIYQSIIGR-GKSKKK 255

Query: 266 TEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLAREAIVSQITWPAQAENGKCLKEETC 325
            + LV EV  +  K    +  LV RND+KFAF+LAREAI  + +    AE G     ETC
Sbjct: 256 IDHLVEEVQGILEKMACIDAVLVARNDVKFAFRLAREAI-GRNSVDVNAEQG-----ETC 315

Query: 326 TICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIESCG 385
            I FE+  V+ MF  + CLHR+CF C+KQHV+V+L +G   +  C   GC  +L +E C 
Sbjct: 316 GIFFEETDVEHMFVTEKCLHRHCFPCVKQHVKVKLRSGT--EPTCLEYGCKFKLTLERCS 375

Query: 386 KFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALMSKTDLLRYTEAFYIDAERTGARK 445
           K L  K+ E+  Q++KE S+P  E++YCPY  CS LMSKT+L         +A+ +  R 
Sbjct: 376 KVLTLKLIEMWKQKMKEDSIPAAERIYCPYPNCSMLMSKTELSS-------EADLSNVRT 435

Query: 446 CMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVCNNMVEL 505
           C+KC   FCI+CKV  H +L+  D++KL+P+   D+  LKSLA  K+WRQC+ C +M+EL
Sbjct: 436 CVKCCGLFCIDCKVPSHTDLSYDDYKKLHPDPLVDDLKLKSLANDKMWRQCVKCRHMIEL 484

Query: 506 AEGCYHITC 513
           + GC H+TC
Sbjct: 496 SHGCNHMTC 484

[Close]

BLAST of CsaV3_1G013060 vs. TAIR 10
Match: AT3G45580.1 (RING/U-box protein with C6HC-type zinc finger )

HSP 1 Score: 257.7 bits (657), Expect = 2.0e-68
Identity = 143/358 (39.94%), Postives = 207/358 (57.82%), Query Frame = 0


Query: 156 SWSVDSECCRVYSKGLISEERIRDMVVRVAGIGVAVCDPKDNLLFEKMSPIESMVEGKET 215
           S  +  +  R+Y KGL+SEE +      +AG GVA+CD  DNLLF+     E + + + T
Sbjct: 20  SSEIKPDSYRLYFKGLVSEETVE----LLAGFGVAICDKDDNLLFQMK---EQVHDSRVT 79

Query: 216 SSECAELEALVEGLNVALILGLKTVTFFCADYMLYQYLTGRVPPATSSTEKLVNEVVVLQ 275
             E  E+ AL  GL  A+ LG+  ++ +   Y +++ +  +   A  +   L++ V  ++
Sbjct: 80  VLE-VEIMALKRGLTEAVGLGIDNISIYSDHYRIFELVMEKSASAEENFALLMDNVQHIR 139

Query: 276 GKFTYCNPSLVTRNDIKFAFKLAREAIVSQITWPAQAENGKCLKEETCTICFED-VSVDQ 335
            + T   P LVTRN IKF ++LA E IVS+I+            ++TC+IC +D    + 
Sbjct: 140 QRLTSSFPVLVTRNQIKFVYELAMETIVSEISIHIPDH------DKTCSICSDDNFEPEL 199

Query: 336 MFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIESCGKFLEPKVFEIM 395
           MFSV  C H +C  C+K+H+EVRLL G      C H  C S+L + +C   L  K+  + 
Sbjct: 200 MFSVALCGHEFCVECVKRHIEVRLLAGG--VPRCLHYQCESKLTLANCANLLTSKLKAMW 259

Query: 396 SQRIKEASVPVQEKVYCPYSRCSALMSKTDLLRYTEAFYIDAERTGARKCMKCNQFFCIN 455
             RI+E S+PV+E+VYCP  RCS+LMS T L   T       E    R C+KC + FCIN
Sbjct: 260 ELRIEEESIPVEERVYCPNPRCSSLMSVTKLSNSTR------EDVTMRSCVKCGEPFCIN 319

Query: 456 CKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVCNNMVELAEGCYHITC 513
           CK+ WH NL+C D++ L PN   D+  LK+LA +K+WRQC  C N++EL+EGC HITC
Sbjct: 320 CKLPWHSNLSCNDYKSLGPNPTADDIKLKALANQKMWRQCENCKNVIELSEGCMHITC 355

[Close]

BLAST of CsaV3_1G013060 vs. TAIR 10
Match: AT2G21420.1 (IBR domain containing protein )

HSP 1 Score: 255.0 bits (650), Expect = 1.3e-67
Identity = 153/369 (41.46%), Postives = 211/369 (57.18%), Query Frame = 0


Query: 146 SSSSSSSSSSSWSVDSECCRVYSKGLISEERIRDMVVRV-AGIGVAVCDPKDNLLFEKMS 205
           S  + S+S+S+   DS   R++ KGL+S+E   DM   V AG G+A+CD  + LL+    
Sbjct: 32  SMVAESASASNIFADSLVYRLFFKGLVSDETTTDMEEIVKAGFGIAICDEANTLLYN--- 91

Query: 206 PIESMVEGKET-SSECAELEALVEGLNVALILGLKTVTFFCADYMLYQYLTGRVPPATSS 265
            ++  + G +  + E  E++AL+  LNV++ + L+ V   C DY ++Q LTGR  P  + 
Sbjct: 92  -MKKSLNGDDVINPEEVEIKALICVLNVSIQMELRNVMICCGDYQIFQILTGRGKPQQNI 151

Query: 266 TEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLAREAIVSQITWPAQAENGKCLKEETC 325
              LV +V  L+GK +     LV R D+     LA EAI                  ETC
Sbjct: 152 VH-LVEQVQHLRGKLSSTEVVLVPRADV---IILAIEAIGG----------------ETC 211

Query: 326 TICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNIESCG 385
            IC E+   D+MF  + C HR CFSC+ +HV+  LL   G+   C H  C SEL  ESC 
Sbjct: 212 CICRENTDADRMFFTENCFHRQCFSCVNRHVQRMLL--CGISPTCLHFPCNSELTFESCS 271

Query: 386 KFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALMSKTDLLRYTEAFYIDAERTGARK 445
           K L P + E   ++I+E  VP  +K+YCPY RCS LMSKT L R T       +++  R 
Sbjct: 272 KVLTPNLIEFWKRKIEEDLVPAADKIYCPYRRCSMLMSKTALSRET-------DQSNVRA 331

Query: 446 CMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVCNNMVEL 505
           C+KC + FCI+CKV  H  L+C D++KLNP+   D K LKSLA +K WRQC+ C+N+VEL
Sbjct: 332 CIKCCRLFCIDCKVPSHAGLSCVDYKKLNPDPLYDVK-LKSLANKKKWRQCVQCSNLVEL 366

Query: 506 AEGCYHITC 513
            EGC HITC
Sbjct: 392 FEGCNHITC 366

[Close]

BLAST of CsaV3_1G013060 vs. TAIR 10
Match: AT5G37560.1 (RING/U-box superfamily protein )

HSP 1 Score: 255.0 bits (650), Expect = 1.3e-67
Identity = 147/373 (39.41%), Postives = 213/373 (57.10%), Query Frame = 0


Query: 143 GESSSSSSSSSSSSWS-VDSECCRVYSKGLISEERIRD--MVVRVAGIGVAVCDPKDNLL 202
           GE SS    S+  + S VD+   ++Y KGL+S E   D   +V+V G GVA+CD  DNL 
Sbjct: 14  GEGSSKVGQSTFETQSCVDNVVYKLYFKGLVSGETATDKKAIVKV-GFGVAICDEADNLF 73

Query: 203 FEKMSPIESMVEGKETSSECAELEALVEGLNVALILGLKTVTFFCADYMLYQYLTGRVPP 262
           +     +   V  +E     A++ AL+ GL  ++  G+K V   C D  +YQ + GR  P
Sbjct: 74  YGMNKSLYEAVINREE----ADILALITGLYESIHRGVKNVVICCDDRQIYQTIIGREKP 133

Query: 263 ATSSTEKLVNEVVVLQGKFTYCNPSLVTRNDIKFAFKLAREAIVSQITWPAQAENGKCLK 322
              +   L+ EV  L+G+       LV   D  FA +LA +A+V      A  E     K
Sbjct: 134 QQKNVH-LLEEVQRLRGRLASTGTVLVATRDDNFALRLAIDALVK-----ATQE-----K 193

Query: 323 EETCTICFEDVSVDQMFSVDGCLHRYCFSCMKQHVEVRLLNGNGMQANCPHQGCTSELNI 382
             TC+IC +    + M   D CLHR+CFSC+KQ V+V+L   +G+   C   GC SEL +
Sbjct: 194 PLTCSICSDKTDAEHMLLNDKCLHRHCFSCVKQQVKVKL--RSGIVPPCLEDGCKSELTL 253

Query: 383 ESCGKFLEPKVFEIMSQRIKEASVPVQEKVYCPYSRCSALMSKTDLLRYTEAFYIDAERT 442
           ESC   L PK+ E+  ++++E  +P  EK+YCPY  CS LMSKT+L R       +AE++
Sbjct: 254 ESCSMVLTPKLIEMWKRKMEEDLIPDAEKIYCPYRSCSMLMSKTELSR-------EAEQS 313

Query: 443 GARKCMKCNQFFCINCKVAWHYNLTCYDHRKLNPNLHPDEKMLKSLATRKLWRQCIVCNN 502
             R C+KC++ FCI+CKV WH +L+C D+++++     ++ MLK LA  ++WRQC  C +
Sbjct: 314 NVRACIKCSELFCIDCKVPWHSDLSCADYKRIHSERLVNDMMLKVLANDQMWRQCSECKH 361

Query: 503 MVELAEGCYHITC 513
           M+EL EGC HITC
Sbjct: 374 MIELTEGCNHITC 361

The following BLAST results are available for this feature:

BLAST of CsaV3_1G013060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652740.1	5.7e-299	100.00	hypothetical protein Csa_013977 [Cucumis sativus]	[more]
XP_004147300.2	3.1e-297	100.00	uncharacterized protein LOC101222498 [Cucumis sativus]	[more]
XP_008463535.1	1.6e-277	93.36	PREDICTED: uncharacterized protein LOC103501665 [Cucumis melo] >KAA0051924.1 put...	[more]
XP_038893965.1	5.7e-259	88.48	uncharacterized protein LOC120082751 [Benincasa hispida]	[more]
XP_022157931.1	1.3e-242	82.17	uncharacterized protein LOC111024540 [Momordica charantia]	[more]

BLAST of CsaV3_1G013060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CE10	7.6e-12	24.62	ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
F4KGU4	9.9e-12	24.62	ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
A4IIY1	2.4e-10	22.45	Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis OX=8364 GN=rn...	[more]
Q9LVW9	1.2e-04	21.83	Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana OX=3702 GN=ARI...	[more]

BLAST of CsaV3_1G013060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXM8	1.5e-297	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G088460 PE=3 SV=1	[more]
A0A5A7U9A4	7.8e-278	93.36	Putative E3 ubiquitin-protein ligase rbrA OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3CJH8	7.8e-278	93.36	uncharacterized protein LOC103501665 OS=Cucumis melo OX=3656 GN=LOC103501665 PE=...	[more]
A0A6J1DZJ9	6.2e-243	82.17	uncharacterized protein LOC111024540 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1HMI1	6.9e-234	78.81	uncharacterized protein LOC111464930 OS=Cucurbita moschata OX=3662 GN=LOC1114649...	[more]

BLAST of CsaV3_1G013060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60250.1	2.3e-88	37.75	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G25370.1	4.6e-73	41.46	RING/U-box superfamily protein	[more]
AT3G45580.1	2.0e-68	39.94	RING/U-box protein with C6HC-type zinc finger	[more]
AT2G21420.1	1.3e-67	41.46	IBR domain containing protein	[more]
AT5G37560.1	1.3e-67	39.41	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002867	IBR domain	SMART	SM00647	ibrneu5	coord: 392..465 e-value: 3.1E-12 score: 56.6
IPR002867	IBR domain	PFAM	PF01485	IBR	coord: 394..465 e-value: 8.9E-13 score: 48.3
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 323..369 e-value: 6.6E-5 score: 22.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 318..405 e-value: 4.6E-17 score: 63.7
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 184..301 e-value: 1.5E-17 score: 63.6
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 170..307 e-value: 4.8E-8 score: 35.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..72
None	No IPR available	PANTHER	PTHR11685:SF252	RBR-TYPE E3 UBIQUITIN TRANSFERASE	coord: 36..513
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 480..513
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 320..404
IPR031127	E3 ubiquitin ligase RBR family	PANTHER	PTHR11685	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	coord: 36..513
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 341..350
IPR044066	TRIAD supradomain	PROSITE	PS51873	TRIAD	coord: 319..515 score: 18.456516
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 323..369 score: 9.509172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G013060.1	CsaV3_1G013060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity