CsaV3_1G012400 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTGTAAAACTGTTCATATATAATTTTAATACTTTATCTGATCATCCAATATTAAAGAGATCAACACAGATGTGTACAATTGTTGTACTGACAATTATAAGATTAGATTTTCATCCACTCATGAAATGATAATAAGTTTCGTAAGATATTTTTCTAACAAAATTTGAGTGATAGTGTAAATTATACAAATTGACACAAACCGCATTTGAAGATACAAATTCATGTTAAAAGAAAACAATTTTATTCGACCAGACGTAAAATGAGAGAGACGAAAAAAAAAACTGGAACTGAGAAGTGAGAATTATTAATGGTTGTTCACTTGTTCTTAAGATGGGCCATTGTTTGGAGGGAAAGTAGGCCGAGTTGATTCACGGCAGAGCCCATTAATACAGAAGGAGAGGGTTCGATTTCGAATTTCAACCCAAGAAGAAGATCAAACACACGGCTTCTGATGAATGTTCCAAGCCATCATCTGCACCCAATTTGATCTCCTTCTGGCTCCTCCGCAATTTAGCAATGGCAGACAACGATTCAGGTGATGGCGAAGTATCTTCAGCCCAAGCAGTTCTTCTCGGAGCTTTAGCTCCTGGGGTCAACGTTAGTTCAAATCAGTTTCCCTTTTGATTTTCCGTCTCCCTTTTTTCCCCTGCTAATCAATTCTTTCAATTGAATTCCCCTTTCTTTAATATTCTAAAATCAGGGTCCTACATGGACTACACTCAAGTCGGCGTTTTTGATGCTGGGACTGTGTCTTATCCTGATGCTTGCCCTTGCATTCTCTTCCAGTGATTCTTGGTTGATTCTTCATGTTACCTTCCTTGTGGTTATTACTGCTACCCTTTTCTTGCTACTTAACTGGTAAGTTGAAATTTTCGTTATTGAATTTTGTCTCCATTTCTGTCTCTTCTGTGTTTTATAAATCTGTATGTGGGGTTTCTTTTAAAGGTTAATTTAACATGTTTGGTCAATTTTGTGGCATTAATTATGTGGTTTGATCTTTAGGTTGTAACAATTTTGCCTTAAACTTGAGTAGATAACAACTTAGTCCGATTTGATCCTAATGAGAAAAACACTTTTAAGATTTTATGAAATTTCTTGAAGTTACGTCTATGATCTTCAATGGCTTAAATTGAACTAGATGTCAATCAATATGCTGTTTTCGATTCTCACAGAAGGATATAGACAACTATAGGCTATAGTGAATTGACCTTATTTTGGATTCCTTTGCTTGTCTAGTAGGTTCGAAATTTCATGTACTGGGCCTAAAATGCAATGAAAATATAGGATGATTAAGTACCTAGAAGTATTTGCTCTAAAGTGCTATGAAACTACCGACTAAGCTGAGTTAAAATATAGCTTTAGCTAGCTCTCAATTGCTTACTGATCTGAAATGGAAAACAGGCCGTGAACCTTTTGTTCTTTTATGAATCACCTAACCAATACTAACAACTGAAGATCAAGTGCTAGTCAATAAGTGTCTGCTGTTCAATTTTAATGCGGGCTGACTAACTAGGTAACGTGATTAACTTATCCATTGCTTTCTATCATGATGCATTGAGAATTGTGTGGAATACTAGTTCAGCATGATAGCCTGTTTCCGAATAATACTATCAATTATATAGAATACCTCCACGATGAGAGGCTGAGAATCTAGGTTTCAGTGGTATCTGTCAACAGAAAAGAAGGTTATGTTTATGTTAATGGCATAGGGTCTAAGGGCTAAATGTAGCAAGGGAAGTCTTGAAAATAATTCACTGTAGTCCCAAAAAAGAGTTTAAGACCAAATAACATTTTTTCTCCTCTTTTTTTAAATAAGAAACTGAACTTTCATTAAGAAACGTGAAATGGTATAGTGTTATACGAAGGTAAGAGGAGCCCCAACCTACAAAAGGACTTCCAGTCCAAAAGAATAATATTTAACTGATAATTACAAAAGGCCTTCGAGGCCACCACCCACTAGGAAGTATTATACCTAATAGCATATTAAATAACATTCAGCGAGCATCCAAATTCTTTGAGATTATGATGGTGATGCGTGAGAAAATTTGAAAGAAGCCAAAGACTGGGAGAACTTATTGAAATATGTTTTCTACAAGGTAGGGTGTATCAAATTAAAATTTGCAGTCTTAGGTTGTTGGAAAGCATTCATTAAGTTTATATGTATTATTTTTAGTTAATTAATTGTGAGGTTAGTGATTGAACCACTGACTTTCGAAATGGTAACCGGTGTCTCTTTATCCATTGAGCATGTTTGGATTGACTTATCAAGTTTATGTTATTGGAGAGACGGTAATTATTTGTGTCTTTTTGACTTGTGGAACAATTGCATGGGGTGTCAAATTGTTTTGATTCATTTCCTTGTTTGTCTAATTAGTGAGATTGATCTTTCTCGGACCTCTCTGTATTTCCTTAGCATTTACAGTTTAGTTACATGGTTTTAGCCTTTTATCCCATAATAATTGATTGTTAAATTAATTAAAGTTGGACGGTTGCATTCGTGATATTTAAGTGAACTAGATCACAAATCATTTGGATGGGGCTTTCACACTCATTATCTATATTAAAACATGACTTCGTATACTCTCAGTAAACAATTTTTACTTCATTGAGTTTGTTTTTAGGCATATAATTGCCTCCATGTGTTTGATTTGGGTTTTTTTAGAAGGGAAAAATTTTCATTGGTGAATGAAATAAAGGAATAAAATCTCCACCTAAAGGTGAGATTAGATAAGATTTTTTCAATGAGAAACCAAATAAGAAAGGCCGTAATCAGAAGAAAAAAAATGCTGATTACGTTGACATCAATACAACTCAAAAGACAAATCAAATTCAAGAAACTATTAAAGGAGGAAAAAAAATCCTGGAAGTATCAATCATTCCTCTCTAACAGAAAGCCAATAAAATGCTGTGATTAAAAGCAAGCCGTAGAGTCTTCTTTTCACCATCGGAGGGATGACCATCAAAGATATAATAAAAAGATTCACCGGGAGAGTCTAGAGAAGCCGAAGATCAACCAAATAATCTCTGCTTCAAGGCATTGTATTATTTAACAACACATATAGTTGATATTCGTGTATAATTAATCTCTTTTTGGCAATTCTCAAAGAAATTACAATTTTTTAACATGTTTTTTTTGTATGTTTTATTCTCCTGTTTTCTTGAACAATGCCAGCATGTTTATGTTGCATTGCATTTGAGTCATCTGTACCTCCTGCTACTGGTCCTCCTTGGCCTACATAGGTTTTGAGTATGACATTGATAGTTTGATCGTATGCATTTGCAATTTACGAATTTACACATGCTGGATCAAATGTGAACCATCTCATGTTTGTGCATATAAATAAATTGTTTTGAGTTCTTTACAGGTTTCTTTCTCAGACTGGCCTGGTTTCAGTGAAGAATCAAATGGAAGAACTGCAGTTGGCGCCAAAGAGTCAAGATAAAAGCGAGAAGAATGAATGATGGTTACTACTGCTATAGCATTATAAACCAAGACATAAAATTGGATGATAGTAACAGAAACTACATTACAGCCTCGAGTAGAAACACGAGGTGATAAGCTTTATAAATCAATCGGGTACAATAGCATCTTTTCTTTATTTGAAGAGAGGAAAAAAGGAAACTTAATTTCAGAAGAAACACTTGGAATGGTAACTTCATTCATTCTTTGATTGCTCCTCCTTGTGTTTTCCCTTTTTCTGCTTAATGTAACAGAAGCAGGAACAGCATGGTAACTGTAAAAAGAACTTCATGTCTTCTTTCGTTTGATGTGAGAGTTAGAAGAGCAAAGAGTTATATATGCGGAGGATAGAGCCTTATTCTTTTGTCATCTTTATTCCTTATTTCTCTTGGGATGCTATTCTTGTTTCTTACAGATACGAAGATGCTTAGCCTTGCTTTGCCACTTCCTGAAACATGAGGAATCTGAGATTATTTTGTTGATGGGTCATTTGCAGATTTTTTTTTTTTTTTGTCTGAAATCTTTCCTTTTCATTTTTCTTTCTTTTCCTTCTACTTTCCCATCTTGCCTTTGTAAAGATTTTGTTTGTTTAAGAACCATGGAAAGGCATAAAGGGGGTGTCATTAGCTTACAGTGTAAACTAATAACTAATAATGGGAAAATAGTGCCCCTGCTAATTTGTTCAGTGTTTTGATTTTTATGAATTTCATTTCAAATCCTTGCGTTGCTGAAGAGAGTTGCTTTTTCAAAATGGCATACTGACTTTTGTCTTTTTATGGTTTCAAATATCAATGTATTAACATTTTAGTGGTCTGTACTTAAATAATCTGTAGATATAACCAAAAAAATAACCCTCCCC ATGGCAGACAACGATTCAGGTGATGGCGAAGTATCTTCAGCCCAAGCAGTTCTTCTCGGAGCTTTAGCTCCTGGGGTCAACGGTCCTACATGGACTACACTCAAGTCGGCGTTTTTGATGCTGGGACTGTGTCTTATCCTGATGCTTGCCCTTGCATTCTCTTCCAGTGATTCTTGGTTGATTCTTCATGTTACCTTCCTTGTGGTTATTACTGCTACCCTTTTCTTGCTACTTAACTGGTTTCTTTCTCAGACTGGCCTGGTTTCAGTGAAGAATCAAATGGAAGAACTGCAGTTGGCGCCAAAGAGTCAAGATAAAAGCGAGAAGAATGAATGA ATGGCAGACAACGATTCAGGTGATGGCGAAGTATCTTCAGCCCAAGCAGTTCTTCTCGGAGCTTTAGCTCCTGGGGTCAACGGTCCTACATGGACTACACTCAAGTCGGCGTTTTTGATGCTGGGACTGTGTCTTATCCTGATGCTTGCCCTTGCATTCTCTTCCAGTGATTCTTGGTTGATTCTTCATGTTACCTTCCTTGTGGTTATTACTGCTACCCTTTTCTTGCTACTTAACTGGTTTCTTTCTCAGACTGGCCTGGTTTCAGTGAAGAATCAAATGGAAGAACTGCAGTTGGCGCCAAAGAGTCAAGATAAAAGCGAGAAGAATGAATGA MADNDSGDGEVSSAQAVLLGALAPGVNGPTWTTLKSAFLMLGLCLILMLALAFSSSDSWLILHVTFLVVITATLFLLLNWFLSQTGLVSVKNQMEELQLAPKSQDKSEKNE* Homology
BLAST of CsaV3_1G012400 vs. NCBI nr
Match: XP_004146608.1 (uncharacterized protein LOC101210942 [Cucumis sativus] >KGN64689.1 hypothetical protein Csa_013713 [Cucumis sativus]) HSP 1 Score: 204.5 bits (519), Expect = 4.7e-49 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsaV3_1G012400 vs. NCBI nr
Match: XP_008442704.1 (PREDICTED: uncharacterized protein LOC103486495 [Cucumis melo]) HSP 1 Score: 201.4 bits (511), Expect = 4.0e-48 Identity = 108/111 (97.30%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsaV3_1G012400 vs. NCBI nr
Match: XP_022954415.1 (uncharacterized protein LOC111456676 [Cucurbita moschata] >XP_023542806.1 uncharacterized protein LOC111802603 [Cucurbita pepo subsp. pepo] >KAG7012441.1 hypothetical protein SDJN02_25193 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194.1 bits (492), Expect = 6.4e-46 Identity = 103/111 (92.79%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of CsaV3_1G012400 vs. NCBI nr
Match: XP_022994498.1 (uncharacterized protein LOC111490203 [Cucurbita maxima]) HSP 1 Score: 192.6 bits (488), Expect = 1.8e-45 Identity = 102/111 (91.89%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of CsaV3_1G012400 vs. NCBI nr
Match: XP_038876938.1 (uncharacterized protein LOC120069298 [Benincasa hispida]) HSP 1 Score: 192.2 bits (487), Expect = 2.4e-45 Identity = 104/111 (93.69%), Postives = 105/111 (94.59%), Query Frame = 0
BLAST of CsaV3_1G012400 vs. ExPASy TrEMBL
Match: A0A0A0LUL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G074940 PE=4 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.3e-49 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsaV3_1G012400 vs. ExPASy TrEMBL
Match: A0A1S3B5U3 (uncharacterized protein LOC103486495 OS=Cucumis melo OX=3656 GN=LOC103486495 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.9e-48 Identity = 108/111 (97.30%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsaV3_1G012400 vs. ExPASy TrEMBL
Match: A0A6J1GSC6 (uncharacterized protein LOC111456676 OS=Cucurbita moschata OX=3662 GN=LOC111456676 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 3.1e-46 Identity = 103/111 (92.79%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of CsaV3_1G012400 vs. ExPASy TrEMBL
Match: A0A6J1K5C1 (uncharacterized protein LOC111490203 OS=Cucurbita maxima OX=3661 GN=LOC111490203 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 8.9e-46 Identity = 102/111 (91.89%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of CsaV3_1G012400 vs. ExPASy TrEMBL
Match: A0A5A7UTX5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00900 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.9e-32 Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of CsaV3_1G012400 vs. TAIR 10
Match: AT1G28250.1 (unknown protein; Has 22 Blast hits to 22 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 122.9 bits (307), Expect = 1.7e-28 Identity = 62/97 (63.92%), Postives = 79/97 (81.44%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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