CsaV3_1G009270 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G009270
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 5773769 .. 5774407 (+)
RNA-Seq ExpressionCsaV3_1G009270
SyntenyCsaV3_1G009270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCTCGGCCGCTTGCCACTAACTCGCCGAGAAAAACCGGAGTTTCCTCTTGGCTCTGCGTATTCGAGAAAGGCGTTTCCATTTTCCAGACTTGTTTTAGAGCGAAAAACAGAGGCTCGTCACTCTGGGACTTCACCATTCTTCATTAAGAGTTAGCACCTTTTCTTAGCTTTCCCTTTTCTTTTTCCTTTATTTCGACTGTTATTGTTTCAAGTTCATTGTTTTCTTGAGAATTTCTTAGCGTCATTCATAGACTGAAACTTATTTGCATGACTCATTGGCTAAGTAGGAGTTTGAAATAAACAATGCTCGGTTTTGTTTTTTACGTGGGAATGAAGTGGGTTCTTGGGGGAAATAAGTGGGAAATTTTGACTGTGGATGCAAAGAAACTCTTCAATGAAAATGTCTTATTTGAACTTTTTGTTTTTCGCTCTTGTGGATTTTTCCTTTTTTTGGAACCCCATATCCGATTAACTGTTTGTGGACTTATCTAGCCATGATGTAATTTTTGTTTGGTGGAGAGGGAAAGAATTTTTGTTTTTCGCCTCTTCTAATATGAAAGATGTTGTGCATTGAAGGATCTCCCAAAAAGCTGGTCGAGGCTTCTCATGAAAGCCGTGGGAAGCTTTCTGTCTCCTGA

mRNA sequence

CTCGGCCGCTTGCCACTAACTCGCCGAGAAAAACCGGAGTTTCCTCTTGGCTCTGCGTATTCGAGAAAGGCGTTTCCATTTTCCAGACTTGTTTTAGAGCGAAAAACAGAGGCTCGTCACTCTGGGACTTCACCATTCTTCATTAAGAGATCTCCCAAAAAGCTGGTCGAGGCTTCTCATGAAAGCCGTGGGAAGCTTTCTGTCTCCTG

Coding sequence (CDS)

CTCGGCCGCTTGCCACTAACTCGCCGAGAAAAACCGGAGTTTCCTCTTGGCTCTGCGTATTCGAGAAAGGCGTTTCCATTTTCCAGACTTGTTTTAGAGCGAAAAACAGAGGCTCGTCACTCTGGGACTTCACCATTCTTCATTAAGAGATCTCCCAAAAAGCTGGTCGAGGCTTCTCATGAAAGCCGTGGGAAGCTTTCTGTCTCCTG

Protein sequence

LGRLPLTRREKPEFPLGSAYSRKAFPFSRLVLERKTEARHSGTSPFFIKRSPKKLVEASHESRGKLSVSX
Homology
[Close]
BLAST of CsaV3_1G009270 vs. NCBI nr
Match: KAE8652617.1 (hypothetical protein Csa_023783, partial [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 3.4e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  LGRLPLTRREKPEFPLGSAYSRKAFPFSRLVLERKTEARHSGTSPFFIKRSPKKLVEASH 60
          LGRLPLTRREKPEFPLGSAYSRKAFPFSRLVLERKTEARHSGTSPFFIKRSPKKLVEASH
Sbjct: 1  LGRLPLTRREKPEFPLGSAYSRKAFPFSRLVLERKTEARHSGTSPFFIKRSPKKLVEASH 60

Query: 61 ESRGKLSVS 70
          ESRGKLSVS
Sbjct: 61 ESRGKLSVS 69

[Close]
BLAST of CsaV3_1G009270 vs. ExPASy TrEMBL
Match: A0A0A0LRF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050120 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  LGRLPLTRREKPEFPLGSAYSRKAFPFSRLVLERKTEARHSGTSPFFIKRSPKKLVEASH 60
          LGRLPLTRREKPEFPLGSAYSRKAFPFSRLVLERKTEARHSGTSPFFIKRSPKKLVEASH
Sbjct: 2  LGRLPLTRREKPEFPLGSAYSRKAFPFSRLVLERKTEARHSGTSPFFIKRSPKKLVEASH 61

Query: 61 ESRGKLSVS 70
          ESRGKLSVS
Sbjct: 62 ESRGKLSVS 70

The following BLAST results are available for this feature:
BLAST of CsaV3_1G009270 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652617.13.4e-29100.00hypothetical protein Csa_023783, partial [Cucumis sativus][more]
BLAST of CsaV3_1G009270 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G009270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRF21.6e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050120 PE=4 SV=1[more]
BLAST of CsaV3_1G009270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G009270.1CsaV3_1G009270.1mRNA