CsaV3_1G009170 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G009170
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 5721792 .. 5722260 (-)
RNA-Seq ExpressionCsaV3_1G009170
SyntenyCsaV3_1G009170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGAACAACCGAAAGAAAACACTTGGAGGAGTGGTATTCTTCTGTGCTTGGCCCGGATCTCGAGCCAAGACAGGAGACACGAAACGGATCTCCAAATAGCAGCAACTGAGAGGAGGAAGAAAATGGAATGTGAAAAGGAAAATAGAAATGGAAGGAAGTGGAAAACCCTAGATCAGAAAAGCAAAGCGCGCCGGTTTATCGGACCCCGATCCGAATTTGTCTGGTTCTTGTTGCCGGTTGAGAGAGAGAGTAAGAGAGAAAGAAAGAAAGAAAACTGGAAGAGGAAAAAAAAACGGATGAGGGCAAATAAAAAAATGGGGCGAAAGAGGGGTATTTATATGGAGGCTACGGTTAGAAAAGCACACGTCATCAAAGAAGGGGTTTGGGTTTATCCTTCTTTGAGGCTGTACACGTGGCGCCATTGCTTTAGCCCAATTACCGGTTGTACAGTTTTCCCCGCGCTAA

mRNA sequence

ATGAATGAACAACCGAAAGAAAACACTTGGAGGAGTGGTATTCTTCTGTGCTTGGCCCGGATCTCGAGCCAAGACAGGAGACACGAAACGGATCTCCAAATAGCAGCAACTGAGAGGAGGAAGAAAATGGAATGTGAAAAGGAAAATAGAAATGGAAGGAAGTGGAAAACCCTAGATCAGAAAAGCAAAGCGCGCCGGTTTATCGGACCCCGATCCGAATTTGTCTGGTTCTTGTTGCCGGTTGAGAGAGAGAGCTGTACACGTGGCGCCATTGCTTTAGCCCAATTACCGGTTGTACAGTTTTCCCCGCGCTAA

Coding sequence (CDS)

ATGAATGAACAACCGAAAGAAAACACTTGGAGGAGTGGTATTCTTCTGTGCTTGGCCCGGATCTCGAGCCAAGACAGGAGACACGAAACGGATCTCCAAATAGCAGCAACTGAGAGGAGGAAGAAAATGGAATGTGAAAAGGAAAATAGAAATGGAAGGAAGTGGAAAACCCTAGATCAGAAAAGCAAAGCGCGCCGGTTTATCGGACCCCGATCCGAATTTGTCTGGTTCTTGTTGCCGGTTGAGAGAGAGAGCTGTACACGTGGCGCCATTGCTTTAGCCCAATTACCGGTTGTACAGTTTTCCCCGCGCTAA

Protein sequence

MNEQPKENTWRSGILLCLARISSQDRRHETDLQIAATERRKKMECEKENRNGRKWKTLDQKSKARRFIGPRSEFVWFLLPVERESCTRGAIALAQLPVVQFSPR*
Homology
[Close]
BLAST of CsaV3_1G009170 vs. NCBI nr
Match: KGN64362.1 (hypothetical protein Csa_013888 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 1.2e-51
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MNEQPKENTWRSGILLCLARISSQDRRHETDLQIAATERRKKMECEKENRNGRKWKTLDQ 60
           MNEQPKENTWRSGILLCLARISSQDRRHETDLQIAATERRKKMECEKENRNGRKWKTLDQ
Sbjct: 1   MNEQPKENTWRSGILLCLARISSQDRRHETDLQIAATERRKKMECEKENRNGRKWKTLDQ 60

Query: 61  KSKARRFIGPRSEFVWFLLPVERESCTRGAIALAQLPVVQFSPR 105
           KSKARRFIGPRSEFVWFLLPVERESCTRGAIALAQLPVVQFSPR
Sbjct: 61  KSKARRFIGPRSEFVWFLLPVERESCTRGAIALAQLPVVQFSPR 104

[Close]
BLAST of CsaV3_1G009170 vs. ExPASy TrEMBL
Match: A0A0A0LU87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050010 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.0e-52
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 

Query: 1   MNEQPKENTWRSGILLCLARISSQDRRHETDLQIAATERRKKMECEKENRNGRKWKTLDQ 60
           MNEQPKENTWRSGILLCLARISSQDRRHETDLQIAATERRKKMECEKENRNGRKWKTLDQ
Sbjct: 1   MNEQPKENTWRSGILLCLARISSQDRRHETDLQIAATERRKKMECEKENRNGRKWKTLDQ 60

Query: 61  KSKARRFIGPRSEFVWFLLPVERESCTRGAIALAQLPVVQFSPR 105
           KSKARRFIGPRSEFVWFLLPVERESCTRGAIALAQLPVVQFSPR
Sbjct: 61  KSKARRFIGPRSEFVWFLLPVERESCTRGAIALAQLPVVQFSPR 104

The following BLAST results are available for this feature:
BLAST of CsaV3_1G009170 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64362.11.2e-51100.00hypothetical protein Csa_013888 [Cucumis sativus][more]
BLAST of CsaV3_1G009170 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G009170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LU876.0e-52100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050010 PE=4 SV=1[more]
BLAST of CsaV3_1G009170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G009170.1CsaV3_1G009170.1mRNA