CsaV3_1G008070 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_1G008070
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Dynein light chain, type 1/2
Location	chr1: 5103571 .. 5105514 (+)
RNA-Seq Expression	CsaV3_1G008070
Synteny	CsaV3_1G008070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAATTAGAATGTAATCAAGTGTTTAATATACTCGTCTTTATATAATCATAGAACTAACTAAGGTTTGTTTCAAATTTCAACGACTTTATTTTTAAAATTTCAAAATTTAAAAAACTCTTTACTTTAATACAACAAATGGCCTAAGGGGTTGGTTTTTATTATTAAAAAAATCGGGTCTAAAAGGCGAAAAAGCAGAAATAAATAAATAAAATCCAGTCAAACACGTCAGTGATCTAACGAACGTCACAGACCTCTCCTCGGCGTCCACGTCAAGGCGCACGTTAGAGCACAGCACAAAATTTCACTGTTCATTCACACAACACAACACAACACAACACACACACAAGTCCCCATCAAGAAAATGGCTTCCCATCTCTCAAAAGCACAAATCCCCATTTTCTTCGTCAAACATTTCTCCTTTCTCTTTCCCATTTCTCTCACAGACCTTCTTCAATGGCGAAACCCACAAACCAGCACCGTAGTTTAGCACCTCCTGACCATGATGATTCTCCTCCCCTTAAACCCATTTTCAGAGCTACTTCCTCTGCTTCCATAGCTAACAATCATTCCATGCTTTCAAAGCTTGATTCCTCCATAGCTGCTGTTCCTAATCCTTCCTCCTTATCCACCCATATCCCATTTTCCACGCTTCATAGTCAAACTGGGTTTTCATCTCAAAGATCAAAGAATTTGAACCCACCTCCAGCTCTCTCTGTTTCTTCTATGCTGAAATCAAAACCCCACCTCCAAAAAATTCCTTCTGGTGGGGATGAGAAATTGAGTAAGGTGTGTAGAGAGTTGGGTAGGAAGAAGTTTTTTTATGAGAAGAAGGAAACCAATGATGGGTTTGATAAAAAAGGTCTTTGTCTTGTGGTGAAGCAGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAATTGAAAGAGCCTCAAAAGGAGCAAAAGATTGTCAGCTTGAGACCAACAGTTTCTTTACTTCGAAAGAGTGGGAGAAGGAAATCATTTGCTGTTTCACAAGTTGAATTGAGTGATATTTTTGCCAAAAATGGTGTGAAAGTGGTTTCTGTTGATATGCAACCAGCTATGCAGATTCATGCTGTGGATTGTGCAAGAAAAACTCATGACAGTATGGAGAAGTTCACTTCCAAAACTCTTGCTTTATCTCTCAAAAGGGTAATTAGTTTAAGGGTTATGTTATGTATACAAATCTGTGCAATTTATTGAAATGAATTAGCTATTAACTTTTCTTGTTTGATTTCTTGCTTGTGGTTTTCCAGGAATTTGATGGGGTTTATGGTCCGGCTTGGCACTGCATCGTGGGGACAAGTTTTGGGTCTTTTGTGACTCATTCAGTTGGTGGTTTCTTATATTTCTCACTGGACCAAAAACTGTATATTCTATTGTTCAAAACGTCCGTACAAAGAGCTGATTGAGATTGAAGTAGATGTCCAAAACACAGCTGGGAAGTCCAATAAATTTGGCATATTAGAGTTTAAGAGAGGTAAAAGAGGCCATCCATCCGAATACTTGTACATTGATTATGTTAAGAAACACACCAACAATACAGAATATTCACTACAATATGTTTAGAGATCTCTTACAAGCTGTTTACTGAACAATTTCATTGCAATTATTGAGGTTTAGTGAGAGAATAACCCTTACTTTTACAGCTCAAAGACTCGTTCTCTACATCTACTTTTCGGCTTCCACTAATCTTTCTGTTTAAATTGCATGTACACAATCTCTCTATTTGCTGCAAAGATTGACTGATTAAGGCTTAGTGGTCTGTGATACATCGATAGCAAAGAATGTTTTACAAGATTTAAGGCTAAATTATGCAGTTTTGTTTCTTGATATGAGATGTGTTTATTATAGAGCTTTCACTCCGCTACCTGATTTTGTAAAATGTAGCAAATGTTTGGTCTGGACAATTGGA

mRNA sequence

ATGGCGAAACCCACAAACCAGCACCGTAGTTTAGCACCTCCTGACCATGATGATTCTCCTCCCCTTAAACCCATTTTCAGAGCTACTTCCTCTGCTTCCATAGCTAACAATCATTCCATGCTTTCAAAGCTTGATTCCTCCATAGCTGCTGTTCCTAATCCTTCCTCCTTATCCACCCATATCCCATTTTCCACGCTTCATAGTCAAACTGGGTTTTCATCTCAAAGATCAAAGAATTTGAACCCACCTCCAGCTCTCTCTGTTTCTTCTATGCTGAAATCAAAACCCCACCTCCAAAAAATTCCTTCTGGTGGGGATGAGAAATTGAGTAAGGTGTGTAGAGAGTTGGGTAGGAAGAAGTTTTTTTATGAGAAGAAGGAAACCAATGATGGGTTTGATAAAAAAGGTCTTTGTCTTGTGGTGAAGCAGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAATTGAAAGAGCCTCAAAAGGAGCAAAAGATTGTCAGCTTGAGACCAACAGTTTCTTTACTTCGAAAGAGTGGGAGAAGGAAATCATTTGCTGTTTCACAAGTTGAATTGAGTGATATTTTTGCCAAAAATGGTGTGAAAGTGGTTTCTGTTGATATGCAACCAGCTATGCAGATTCATGCTGTGGATTGTGCAAGAAAAACTCATGACAGTATGGAGAAGTTCACTTCCAAAACTCTTGCTTTATCTCTCAAAAGGGAATTTGATGGGGTTTATGGTCCGGCTTGGCACTGCATCGTGGGGACAAGTTTTGGGTCTTTTGTGACTCATTCAGTTGGTGGTTTCTTATATTTCTCACTGGACCAAAAACTGTATATTCTATTGTTCAAAACGTCCGTACAAAGAGCTGATTGA

Coding sequence (CDS)

ATGGCGAAACCCACAAACCAGCACCGTAGTTTAGCACCTCCTGACCATGATGATTCTCCTCCCCTTAAACCCATTTTCAGAGCTACTTCCTCTGCTTCCATAGCTAACAATCATTCCATGCTTTCAAAGCTTGATTCCTCCATAGCTGCTGTTCCTAATCCTTCCTCCTTATCCACCCATATCCCATTTTCCACGCTTCATAGTCAAACTGGGTTTTCATCTCAAAGATCAAAGAATTTGAACCCACCTCCAGCTCTCTCTGTTTCTTCTATGCTGAAATCAAAACCCCACCTCCAAAAAATTCCTTCTGGTGGGGATGAGAAATTGAGTAAGGTGTGTAGAGAGTTGGGTAGGAAGAAGTTTTTTTATGAGAAGAAGGAAACCAATGATGGGTTTGATAAAAAAGGTCTTTGTCTTGTGGTGAAGCAGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAGGAGAAGGAATTGAAAGAGCCTCAAAAGGAGCAAAAGATTGTCAGCTTGAGACCAACAGTTTCTTTACTTCGAAAGAGTGGGAGAAGGAAATCATTTGCTGTTTCACAAGTTGAATTGAGTGATATTTTTGCCAAAAATGGTGTGAAAGTGGTTTCTGTTGATATGCAACCAGCTATGCAGATTCATGCTGTGGATTGTGCAAGAAAAACTCATGACAGTATGGAGAAGTTCACTTCCAAAACTCTTGCTTTATCTCTCAAAAGGGAATTTGATGGGGTTTATGGTCCGGCTTGGCACTGCATCGTGGGGACAAGTTTTGGGTCTTTTGTGACTCATTCAGTTGGTGGTTTCTTATATTTCTCACTGGACCAAAAACTGTATATTCTATTGTTCAAAACGTCCGTACAAAGAGCTGATTGA

Protein sequence

MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAVPNPSSLSTHIPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRKKFFYEKKETNDGFDKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTVSLLRKSGRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD*

Homology

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BLAST of CsaV3_1G008070 vs. NCBI nr
Match: XP_004152543.3 (uncharacterized protein LOC101220241 [Cucumis sativus] >KAE8652578.1 hypothetical protein Csa_013326 [Cucumis sativus])

HSP 1 Score: 560.5 bits (1443), Expect = 8.9e-156
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAVPNPSSLSTH 60
           MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAVPNPSSLSTH
Sbjct: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAVPNPSSLSTH 60

Query: 61  IPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRKK 120
           IPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRKK
Sbjct: 61  IPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRKK 120

Query: 121 FFYEKKETNDGFDKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTVSLLRKS 180
           FFYEKKETNDGFDKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTVSLLRKS
Sbjct: 121 FFYEKKETNDGFDKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTVSLLRKS 180

Query: 181 GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL 240
           GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL
Sbjct: 181 GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL 240

Query: 241 KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 294
           KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD
Sbjct: 241 KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 293

[Close]

BLAST of CsaV3_1G008070 vs. NCBI nr
Match: XP_008437777.1 (PREDICTED: uncharacterized protein LOC103483107 [Cucumis melo] >TYJ99122.1 Dynein light chain, type 1/2 [Cucumis melo var. makuwa])

HSP 1 Score: 519.2 bits (1336), Expect = 2.3e-143
Identity = 278/293 (94.88%), Postives = 280/293 (95.56%), Query Frame = 0


Query: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAVPNPSSLSTH 60
           MAKPTNQ RSLAPPDH DSPPLKPIFRATSSASIANNHS L KLDSSIAAVPNPSSLSTH
Sbjct: 1   MAKPTNQQRSLAPPDH-DSPPLKPIFRATSSASIANNHSTLLKLDSSIAAVPNPSSLSTH 60

Query: 61  IPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRKK 120
           IPFS LHSQ GFSSQRSKNLNPPPA +VSSMLKSKPHLQKIPSGGDEK SKVCRELGRKK
Sbjct: 61  IPFSKLHSQAGFSSQRSKNLNPPPAPTVSSMLKSKPHLQKIPSGGDEKFSKVCRELGRKK 120

Query: 121 FFYEKKETNDGFDKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTVSLLRKS 180
           FF +KKETNDGFDKKGLCLVVK   EKEEKEEKEEKELKEPQK QKIVSLRPTVSLLRKS
Sbjct: 121 FFDDKKETNDGFDKKGLCLVVK---EKEEKEEKEEKELKEPQKGQKIVSLRPTVSLLRKS 180

Query: 181 GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL 240
           GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL
Sbjct: 181 GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL 240

Query: 241 KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 294
           KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD
Sbjct: 241 KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 289

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BLAST of CsaV3_1G008070 vs. NCBI nr
Match: XP_038894695.1 (uncharacterized protein LOC120083162 [Benincasa hispida])

HSP 1 Score: 451.8 bits (1161), Expect = 4.4e-123
Identity = 245/294 (83.33%), Postives = 257/294 (87.41%), Query Frame = 0


Query: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAVPNPSSLSTH 60
           MAKPTNQ R LAPPDH DSPPLKP FRA SSA +ANNHS  SKLDS+IAA PNPS LS+H
Sbjct: 1   MAKPTNQLRILAPPDH-DSPPLKPPFRAPSSAFMANNHSTPSKLDSAIAAAPNPSPLSSH 60

Query: 61  IPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRKK 120
           IPFST   +TGFSSQRS NLNPPPALSVSSM+KSKPHLQK  SGGDEKLSKVC+ELGRKK
Sbjct: 61  IPFST--QKTGFSSQRSMNLNPPPALSVSSMVKSKPHLQKSASGGDEKLSKVCKELGRKK 120

Query: 121 FFYEKKETNDGF-DKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTVSLLRK 180
           FFYEKKETNDG  DK+GLCLVVK            EKELKEPQK   +VSL+PTVSLLRK
Sbjct: 121 FFYEKKETNDGVDDKRGLCLVVK------------EKELKEPQKGHDLVSLKPTVSLLRK 180

Query: 181 SGRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALS 240
            GRR+SFA SQVELSDI AKNGVKVVSVDMQPAMQIHAVDCARK HDSMEKFTSKTLALS
Sbjct: 181 GGRRRSFAGSQVELSDILAKNGVKVVSVDMQPAMQIHAVDCARKAHDSMEKFTSKTLALS 240

Query: 241 LKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 294
           LKREFDGVYGPAWHCI+GTSFGSFVTHSVGGFLYFS+DQKLYILLFKTSVQRAD
Sbjct: 241 LKREFDGVYGPAWHCIIGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 279

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BLAST of CsaV3_1G008070 vs. NCBI nr
Match: XP_023520376.1 (uncharacterized protein LOC111783690 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.1 bits (1050), Expect = 3.3e-110
Identity = 227/298 (76.17%), Postives = 243/298 (81.54%), Query Frame = 0


Query: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAV---PNPSSL 60
           MAKPTNQ R LAPPD  DSPPLKP FRA  SAS+ANNHS  +KLDS+IAA    PNPS L
Sbjct: 1   MAKPTNQLRILAPPD-PDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASPPPNPSPL 60

Query: 61  STHIPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELG 120
           S HIPFS LH Q GFSSQ+ KN NPPPAL+VS+M+KSKPHLQKI SG DEKLSK+C+E+G
Sbjct: 61  SNHIPFSKLHRQPGFSSQKPKNSNPPPALTVSAMVKSKPHLQKIASGEDEKLSKLCKEMG 120

Query: 121 RKKFFYEKKETNDGF--DKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTVS 180
            KKFF EKKE N G   D K L LVVK+K          EKELKEPQK   + +LRPTVS
Sbjct: 121 TKKFFDEKKEANKGVDDDSKALYLVVKEK----------EKELKEPQKGHGLHTLRPTVS 180

Query: 181 LLRKSGRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKT 240
           LLRK GRR+S A  QVEL+DI AKNGVKVVSVDM PAMQIHAVDCARK HDSMEKFTSKT
Sbjct: 181 LLRKDGRRRSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKT 240

Query: 241 LALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 294
           LALSLKREFD VYGPAWHCIVG SFGSFVTHSVGGFLYFS+DQKLYILLFKTSVQRAD
Sbjct: 241 LALSLKREFDSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 287

[Close]

BLAST of CsaV3_1G008070 vs. NCBI nr
Match: XP_022924012.1 (uncharacterized protein LOC111431561 [Cucurbita moschata])

HSP 1 Score: 407.5 bits (1046), Expect = 9.6e-110
Identity = 226/299 (75.59%), Postives = 243/299 (81.27%), Query Frame = 0


Query: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAV----PNPSS 60
           MAKPTNQ R LAPPD  DSPPLKP FRA  SAS+ANNHS  +KLDS+IAA     PNPS 
Sbjct: 1   MAKPTNQLRILAPPD-PDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAAPPPPNPSP 60

Query: 61  LSTHIPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCREL 120
           LS HIPFS LH Q+ FSSQ+ KN NPPP L+VS+M+KSKPHLQKI SGGDEKLSK+C+E+
Sbjct: 61  LSNHIPFSKLHRQSDFSSQKPKNPNPPPPLTVSTMVKSKPHLQKIASGGDEKLSKLCKEM 120

Query: 121 GRKKFFYEKKETNDGF--DKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTV 180
           G KKFF EKKE N G   D K L LVVK+K          EKELKEPQK   + +LRPTV
Sbjct: 121 GTKKFFDEKKEANKGVNDDSKALYLVVKEK----------EKELKEPQKGHGLHTLRPTV 180

Query: 181 SLLRKSGRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSK 240
           SLLRK GRR+S A  QVEL+DI AKNGVKVVSVDM PAMQIHAVDCARK HDSMEKFTSK
Sbjct: 181 SLLRKDGRRRSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSK 240

Query: 241 TLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 294
           TLALSLKREFD VYGPAWHCIVG SFGSFVTHSVGGFLYFS+DQKLYILLFKTSVQRAD
Sbjct: 241 TLALSLKREFDSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288

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BLAST of CsaV3_1G008070 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.0e-13
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 204 VVSVDMQPAMQIHAVDCARKTHDSMEKFT-SKTLALSLKREFDGVYGPAWHCIVGTSFGS 263
           + + DM   MQ  AVDCA +   +MEK+   K +A  +K+EFD  Y P WHCIVG +FGS
Sbjct: 8   IKNADMSEDMQQDAVDCATQ---AMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 264 FVTHSVGGFLYFSLDQKLYILLFKT 288
           +VTH    F+YF L Q + ILLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of CsaV3_1G008070 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.0e-13
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 204 VVSVDMQPAMQIHAVDCARKTHDSMEKFT-SKTLALSLKREFDGVYGPAWHCIVGTSFGS 263
           + + DM   MQ  AVDCA +   +MEK+   K +A  +K+EFD  Y P WHCIVG +FGS
Sbjct: 8   IKNADMSEDMQQDAVDCATQ---AMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 264 FVTHSVGGFLYFSLDQKLYILLFKT 288
           +VTH    F+YF L Q + ILLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of CsaV3_1G008070 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.0e-13
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 204 VVSVDMQPAMQIHAVDCARKTHDSMEKFT-SKTLALSLKREFDGVYGPAWHCIVGTSFGS 263
           + + DM   MQ  AVDCA +   +MEK+   K +A  +K+EFD  Y P WHCIVG +FGS
Sbjct: 8   IKNADMSEDMQQDAVDCATQ---AMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 264 FVTHSVGGFLYFSLDQKLYILLFKT 288
           +VTH    F+YF L Q + ILLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of CsaV3_1G008070 vs. ExPASy Swiss-Prot
Match: Q78P75 (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.0e-13
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 204 VVSVDMQPAMQIHAVDCARKTHDSMEKFT-SKTLALSLKREFDGVYGPAWHCIVGTSFGS 263
           + + DM   MQ  AVDCA +   +MEK+   K +A  +K+EFD  Y P WHCIVG +FGS
Sbjct: 8   IKNADMSEDMQQDAVDCATQ---AMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 264 FVTHSVGGFLYFSLDQKLYILLFKT 288
           +VTH    F+YF L Q + ILLFK+
Sbjct: 68  YVTHETKHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of CsaV3_1G008070 vs. ExPASy Swiss-Prot
Match: Q24117 (Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.1e-13
Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 204 VVSVDMQPAMQIHAVDCARKTHDSMEKFT-SKTLALSLKREFDGVYGPAWHCIVGTSFGS 263
           + + DM   MQ  AVDCA +   ++EK+   K +A  +K+EFD  Y P WHCIVG +FGS
Sbjct: 8   IKNADMSEEMQQDAVDCATQ---ALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGS 67

Query: 264 FVTHSVGGFLYFSLDQKLYILLFKT 288
           +VTH    F+YF L Q + ILLFK+
Sbjct: 68  YVTHETRHFIYFYLGQ-VAILLFKS 88

[Close]

BLAST of CsaV3_1G008070 vs. ExPASy TrEMBL
Match: A0A0A0LW58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045690 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 8.4e-152
Identity = 287/293 (97.95%), Postives = 287/293 (97.95%), Query Frame = 0


Query: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAVPNPSSLSTH 60
           MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAVPNPSSLSTH
Sbjct: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAVPNPSSLSTH 60

Query: 61  IPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRKK 120
           IPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRKK
Sbjct: 61  IPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRKK 120

Query: 121 FFYEKKETNDGFDKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTVSLLRKS 180
           FFYEKKETNDGFDKKGLCLVVKQ      KEEKEEKELKEPQKEQKIVSLRPTVSLLRKS
Sbjct: 121 FFYEKKETNDGFDKKGLCLVVKQ------KEEKEEKELKEPQKEQKIVSLRPTVSLLRKS 180

Query: 181 GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL 240
           GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL
Sbjct: 181 GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL 240

Query: 241 KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 294
           KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD
Sbjct: 241 KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 287

[Close]

BLAST of CsaV3_1G008070 vs. ExPASy TrEMBL
Match: A0A5D3BH95 (Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003270 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 1.1e-143
Identity = 278/293 (94.88%), Postives = 280/293 (95.56%), Query Frame = 0


Query: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAVPNPSSLSTH 60
           MAKPTNQ RSLAPPDH DSPPLKPIFRATSSASIANNHS L KLDSSIAAVPNPSSLSTH
Sbjct: 1   MAKPTNQQRSLAPPDH-DSPPLKPIFRATSSASIANNHSTLLKLDSSIAAVPNPSSLSTH 60

Query: 61  IPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRKK 120
           IPFS LHSQ GFSSQRSKNLNPPPA +VSSMLKSKPHLQKIPSGGDEK SKVCRELGRKK
Sbjct: 61  IPFSKLHSQAGFSSQRSKNLNPPPAPTVSSMLKSKPHLQKIPSGGDEKFSKVCRELGRKK 120

Query: 121 FFYEKKETNDGFDKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTVSLLRKS 180
           FF +KKETNDGFDKKGLCLVVK   EKEEKEEKEEKELKEPQK QKIVSLRPTVSLLRKS
Sbjct: 121 FFDDKKETNDGFDKKGLCLVVK---EKEEKEEKEEKELKEPQKGQKIVSLRPTVSLLRKS 180

Query: 181 GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL 240
           GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL
Sbjct: 181 GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL 240

Query: 241 KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 294
           KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD
Sbjct: 241 KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 289

[Close]

BLAST of CsaV3_1G008070 vs. ExPASy TrEMBL
Match: A0A1S3AVF4 (uncharacterized protein LOC103483107 OS=Cucumis melo OX=3656 GN=LOC103483107 PE=4 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 1.1e-143
Identity = 278/293 (94.88%), Postives = 280/293 (95.56%), Query Frame = 0


Query: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAVPNPSSLSTH 60
           MAKPTNQ RSLAPPDH DSPPLKPIFRATSSASIANNHS L KLDSSIAAVPNPSSLSTH
Sbjct: 1   MAKPTNQQRSLAPPDH-DSPPLKPIFRATSSASIANNHSTLLKLDSSIAAVPNPSSLSTH 60

Query: 61  IPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELGRKK 120
           IPFS LHSQ GFSSQRSKNLNPPPA +VSSMLKSKPHLQKIPSGGDEK SKVCRELGRKK
Sbjct: 61  IPFSKLHSQAGFSSQRSKNLNPPPAPTVSSMLKSKPHLQKIPSGGDEKFSKVCRELGRKK 120

Query: 121 FFYEKKETNDGFDKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTVSLLRKS 180
           FF +KKETNDGFDKKGLCLVVK   EKEEKEEKEEKELKEPQK QKIVSLRPTVSLLRKS
Sbjct: 121 FFDDKKETNDGFDKKGLCLVVK---EKEEKEEKEEKELKEPQKGQKIVSLRPTVSLLRKS 180

Query: 181 GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL 240
           GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL
Sbjct: 181 GRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSL 240

Query: 241 KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 294
           KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD
Sbjct: 241 KREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 289

[Close]

BLAST of CsaV3_1G008070 vs. ExPASy TrEMBL
Match: A0A6J1E7P6 (uncharacterized protein LOC111431561 OS=Cucurbita moschata OX=3662 GN=LOC111431561 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.6e-110
Identity = 226/299 (75.59%), Postives = 243/299 (81.27%), Query Frame = 0


Query: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAV----PNPSS 60
           MAKPTNQ R LAPPD  DSPPLKP FRA  SAS+ANNHS  +KLDS+IAA     PNPS 
Sbjct: 1   MAKPTNQLRILAPPD-PDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAAAPPPPNPSP 60

Query: 61  LSTHIPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCREL 120
           LS HIPFS LH Q+ FSSQ+ KN NPPP L+VS+M+KSKPHLQKI SGGDEKLSK+C+E+
Sbjct: 61  LSNHIPFSKLHRQSDFSSQKPKNPNPPPPLTVSTMVKSKPHLQKIASGGDEKLSKLCKEM 120

Query: 121 GRKKFFYEKKETNDGF--DKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTV 180
           G KKFF EKKE N G   D K L LVVK+K          EKELKEPQK   + +LRPTV
Sbjct: 121 GTKKFFDEKKEANKGVNDDSKALYLVVKEK----------EKELKEPQKGHGLHTLRPTV 180

Query: 181 SLLRKSGRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSK 240
           SLLRK GRR+S A  QVEL+DI AKNGVKVVSVDM PAMQIHAVDCARK HDSMEKFTSK
Sbjct: 181 SLLRKDGRRRSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSK 240

Query: 241 TLALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 294
           TLALSLKREFD VYGPAWHCIVG SFGSFVTHSVGGFLYFS+DQKLYILLFKTSVQRAD
Sbjct: 241 TLALSLKREFDSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 288

[Close]

BLAST of CsaV3_1G008070 vs. ExPASy TrEMBL
Match: A0A6J1KET7 (uncharacterized protein LOC111495174 OS=Cucurbita maxima OX=3661 GN=LOC111495174 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 6.7e-109
Identity = 224/298 (75.17%), Postives = 241/298 (80.87%), Query Frame = 0


Query: 1   MAKPTNQHRSLAPPDHDDSPPLKPIFRATSSASIANNHSMLSKLDSSIAAV---PNPSSL 60
           MAKPTNQ R LAPPD  DSPPLKP FRA  SAS+ANNHS  +KLDS+IAA    PNPS L
Sbjct: 1   MAKPTNQLRILAPPD-PDSPPLKPPFRAPPSASMANNHSTPAKLDSAIAAASSPPNPSPL 60

Query: 61  STHIPFSTLHSQTGFSSQRSKNLNPPPALSVSSMLKSKPHLQKIPSGGDEKLSKVCRELG 120
           S HIPFS LH Q G  SQ+ KN NPPP+L+V +M+KSKPHLQKI SGGDEKLSK+C+E+G
Sbjct: 61  SNHIPFSELHRQPGCLSQKPKNSNPPPSLTVPTMVKSKPHLQKIASGGDEKLSKLCKEMG 120

Query: 121 RKKFFYEKKETNDGF--DKKGLCLVVKQKEEKEEKEEKEEKELKEPQKEQKIVSLRPTVS 180
            KKFF EKKE N G   D K L LVVK+K          EKELKEPQK   + +LRPTVS
Sbjct: 121 TKKFFDEKKEANKGVDDDSKALYLVVKEK----------EKELKEPQKGHGLHTLRPTVS 180

Query: 181 LLRKSGRRKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKT 240
           LLRK GRR+S A  QVEL+DI AKNGVKVVSVDM PAMQIHAVDCARK HDSMEKFTSKT
Sbjct: 181 LLRKDGRRRSLADPQVELADILAKNGVKVVSVDMPPAMQIHAVDCARKAHDSMEKFTSKT 240

Query: 241 LALSLKREFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 294
           LALSLKREFD VYGPAWHCIVG SFGSFVTHSVGGFLYFS+DQKLYILLFKTSVQRAD
Sbjct: 241 LALSLKREFDSVYGPAWHCIVGKSFGSFVTHSVGGFLYFSMDQKLYILLFKTSVQRAD 287

[Close]

BLAST of CsaV3_1G008070 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 123.2 bits (308), Expect = 3.4e-28
Identity = 59/91 (64.84%), Postives = 73/91 (80.22%), Query Frame = 0


Query: 202 VKVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFG 261
           V++++ DM   MQ HA  CAR T DS+EKF+SK +A +LK+EFD  YGPAWHCIVG+SFG
Sbjct: 117 VRILAADMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFG 176

Query: 262 SFVTHSVGGFLYFSLDQKLYILLFKTSVQRA 293
           SFVTHS G F+YFS+D KLY+LLFKT V+ A
Sbjct: 177 SFVTHSTGCFIYFSMD-KLYVLLFKTKVRPA 206

[Close]

BLAST of CsaV3_1G008070 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 98.6 bits (244), Expect = 8.9e-21
Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = 0


Query: 183 RKSFAVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSME-KFTSKTLALSLK 242
           +K  A  Q +  D F    V+V + DM    Q  A   +R+  ++   K  +K LA +LK
Sbjct: 20  QKKKAKEQQDQKDEF---NVRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALK 79

Query: 243 REFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKTSVQRAD 294
           ++FD  YGPAWHCIVGTSFGS+VTHS GGFLYF +D K+Y+LLFKT+V+  D
Sbjct: 80  KDFDSAYGPAWHCIVGTSFGSYVTHSTGGFLYFQID-KVYVLLFKTAVEPLD 127

[Close]

BLAST of CsaV3_1G008070 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 75.9 bits (185), Expect = 6.2e-14
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 0


Query: 187 AVSQVELSDIFAKNGVKVVSVDMQPAMQIHAVDCARKTHDSMEKFT-SKTLALSLKREFD 246
           ++ +VE S    K  V + S DM+  MQ  A++ A     + EK++  K +A ++K+EFD
Sbjct: 26  SLPEVEASPPAGKRAV-IKSADMKDDMQKEAIEIA---ISAFEKYSVEKDIAENIKKEFD 85

Query: 247 GVYGPAWHCIVGTSFGSFVTHSVGGFLYFSLDQKLYILLFKT 288
             +G  WHCIVG +FGS+VTH    F+YF LDQK  +LLFK+
Sbjct: 86  KKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKA-VLLFKS 122

[Close]

BLAST of CsaV3_1G008070 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 73.2 bits (178), Expect = 4.0e-13
Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 203 KVVSVDMQPAMQIHAVDCARKTHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGS 262
           KV   DM   MQ+ A+  A ++ D  + F S ++A  +K+EFD  YG  W C+VGT+FG 
Sbjct: 7   KVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNFGC 66

Query: 263 FVTHSVGGFLYFSLDQKLYILLFK 287
           F THS G F+YF L   L  L+FK
Sbjct: 67  FFTHSKGTFIYFHLG-TLNFLIFK 89

[Close]

BLAST of CsaV3_1G008070 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-12
Identity = 39/82 (47.56%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 208 DMQPAMQIHAVDCARKTHDSMEKFTSKTLALSLKREFDGVYGPAWHCIVGTSFGSFVTHS 267
           DM+  M+  A+  A K  D  +      +A  +K+EFD  YG  W CIVGT FGSFVTH 
Sbjct: 12  DMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVGTHFGSFVTHC 71

Query: 268 VGGFLYFSLDQKLYILLFKTSV 290
            G F++FS+   L ILLFK SV
Sbjct: 72  SGCFIHFSVG-SLTILLFKGSV 92

The following BLAST results are available for this feature:

BLAST of CsaV3_1G008070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152543.3	8.9e-156	100.00	uncharacterized protein LOC101220241 [Cucumis sativus] >KAE8652578.1 hypothetica...	[more]
XP_008437777.1	2.3e-143	94.88	PREDICTED: uncharacterized protein LOC103483107 [Cucumis melo] >TYJ99122.1 Dynei...	[more]
XP_038894695.1	4.4e-123	83.33	uncharacterized protein LOC120083162 [Benincasa hispida]	[more]
XP_023520376.1	3.3e-110	76.17	uncharacterized protein LOC111783690 [Cucurbita pepo subsp. pepo]	[more]
XP_022924012.1	9.6e-110	75.59	uncharacterized protein LOC111431561 [Cucurbita moschata]	[more]

BLAST of CsaV3_1G008070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3MHR3	3.0e-13	49.41	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]
Q96FJ2	3.0e-13	49.41	Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1	[more]
Q9D0M5	3.0e-13	49.41	Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1	[more]
Q78P75	3.0e-13	49.41	Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 S...	[more]
Q24117	5.1e-13	48.24	Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster OX=7227 GN=ctp PE=1...	[more]

BLAST of CsaV3_1G008070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW58	8.4e-152	97.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045690 PE=4 SV=1	[more]
A0A5D3BH95	1.1e-143	94.88	Dynein light chain, type 1/2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AVF4	1.1e-143	94.88	uncharacterized protein LOC103483107 OS=Cucumis melo OX=3656 GN=LOC103483107 PE=...	[more]
A0A6J1E7P6	4.6e-110	75.59	uncharacterized protein LOC111431561 OS=Cucurbita moschata OX=3662 GN=LOC1114315...	[more]
A0A6J1KET7	6.7e-109	75.17	uncharacterized protein LOC111495174 OS=Cucurbita maxima OX=3661 GN=LOC111495174...	[more]

BLAST of CsaV3_1G008070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20110.1	3.4e-28	64.84	Dynein light chain type 1 family protein	[more]
AT1G23220.1	8.9e-21	49.11	Dynein light chain type 1 family protein	[more]
AT4G15930.1	6.2e-14	43.14	Dynein light chain type 1 family protein	[more]
AT3G16120.1	4.0e-13	45.24	Dynein light chain type 1 family protein	[more]
AT4G27360.1	1.5e-12	47.56	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 139..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..164
None	No IPR available	PANTHER	PTHR11886:SF80	INTRASTRAND CROSS-LINK RECOGNITION PROTEIN-LIKE	coord: 37..293
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 197..287 e-value: 1.5E-36 score: 137.4
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 202..287 e-value: 8.6E-27 score: 93.4
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 37..293
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 195..288 e-value: 2.9E-29 score: 102.9
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 199..287

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G008070.1	CsaV3_1G008070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex