CsaV3_1G006740 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G006740
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1: 4327835 .. 4328173 (+)
RNA-Seq ExpressionCsaV3_1G006740
SyntenyCsaV3_1G006740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAAAAAAGAAGACTGTTTTTGGGTTGATGGAGCTTACGTGGGATTTCAGTGATATTCTGAACTTACGTCTCTGTTGTTTTCTCATTTGGCTACGTGTAGTTCAGGCTTGTGTGGTAATAAGTTCCCAATTGATCATCCAAAGAAGCTATATATGAACAAAAAAGTAAACTAATATCTCAAAAGAAAAAAATGTGGCTCTCTCTTTAATTATAATTTATTGAATTATCATATTTATAATTGCTTAATTTATGCAGGAGTGGCTCTCTTTCTTATGCATGGTTTTGCAGAAGGTTTTGGAGGATATGGAGATCAGTCCTCAAATTTTCATATAG

mRNA sequence

ATGGAAGAAAAAAAGAAGACTGTTTTTGGGTTGATGGAGCTTACGTGGGATTTCAGTGATATTCTGAACTTACGTCTCTGTTGTTTTCTCATTTGGCTACGTGTAGTTCAGGCTTGTGTGGAGTGGCTCTCTTTCTTATGCATGGTTTTGCAGAAGGTTTTGGAGGATATGGAGATCAGTCCTCAAATTTTCATATAG

Coding sequence (CDS)

ATGGAAGAAAAAAAGAAGACTGTTTTTGGGTTGATGGAGCTTACGTGGGATTTCAGTGATATTCTGAACTTACGTCTCTGTTGTTTTCTCATTTGGCTACGTGTAGTTCAGGCTTGTGTGGAGTGGCTCTCTTTCTTATGCATGGTTTTGCAGAAGGTTTTGGAGGATATGGAGATCAGTCCTCAAATTTTCATATAG

Protein sequence

MEEKKKTVFGLMELTWDFSDILNLRLCCFLIWLRVVQACVEWLSFLCMVLQKVLEDMEISPQIFI*
Homology
[Close]
BLAST of CsaV3_1G006740 vs. NCBI nr
Match: KGN64133.1 (hypothetical protein Csa_014323 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 6.0e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MEEKKKTVFGLMELTWDFSDILNLRLCCFLIWLRVVQACVEWLSFLCMVLQKVLEDMEIS 60
          MEEKKKTVFGLMELTWDFSDILNLRLCCFLIWLRVVQACVEWLSFLCMVLQKVLEDMEIS
Sbjct: 1  MEEKKKTVFGLMELTWDFSDILNLRLCCFLIWLRVVQACVEWLSFLCMVLQKVLEDMEIS 60

Query: 61 PQIFI 66
          PQIFI
Sbjct: 61 PQIFI 65

[Close]
BLAST of CsaV3_1G006740 vs. ExPASy TrEMBL
Match: A0A0A0LQT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042450 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-28
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MEEKKKTVFGLMELTWDFSDILNLRLCCFLIWLRVVQACVEWLSFLCMVLQKVLEDMEIS 60
          MEEKKKTVFGLMELTWDFSDILNLRLCCFLIWLRVVQACVEWLSFLCMVLQKVLEDMEIS
Sbjct: 1  MEEKKKTVFGLMELTWDFSDILNLRLCCFLIWLRVVQACVEWLSFLCMVLQKVLEDMEIS 60

Query: 61 PQIFI 66
          PQIFI
Sbjct: 61 PQIFI 65

The following BLAST results are available for this feature:
BLAST of CsaV3_1G006740 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64133.16.0e-28100.00hypothetical protein Csa_014323 [Cucumis sativus][more]
BLAST of CsaV3_1G006740 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G006740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQT42.9e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042450 PE=4 SV=1[more]
BLAST of CsaV3_1G006740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G006740.1CsaV3_1G006740.1mRNA